RNA–Protein interactions for RNA: ENST00000489935.1

KCNC4-207, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 1,955 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-207ENST00000489935 ZMYM3Q14202 1370 aa35.18■■■■□ 3.22
KCNC4-207ENST00000489935 RCAN3Q9UKA8 241 aa35.18■■■■□ 3.22
KCNC4-207ENST00000489935 PRAM1Q96QH2 718 aa35.16■■■■□ 3.22
KCNC4-207ENST00000489935 RIMS2Q9UQ26 1411 aa35.15■■■■□ 3.22
KCNC4-207ENST00000489935 MORC1Q86VD1 984 aa35.15■■■■□ 3.22
KCNC4-207ENST00000489935 ANKRD36BQ8N2N9 1353 aa35.14■■■■□ 3.22
KCNC4-207ENST00000489935 PLEKHH1Q9ULM0 1364 aa35.14■■■■□ 3.22
KCNC4-207ENST00000489935 ESF1Q9H501 851 aaKnown RBP35.13■■■■□ 3.21
KCNC4-207ENST00000489935 RRP1P56182 461 aaKnown RBP35.12■■■■□ 3.21
KCNC4-207ENST00000489935 POGKQ9P215 609 aa35.12■■■■□ 3.21
KCNC4-207ENST00000489935 MINK1Q8N4C8 1332 aaPredicted RBP35.11■■■■□ 3.21
KCNC4-207ENST00000489935 CGNL1Q0VF96 1302 aa35.1■■■■□ 3.21
KCNC4-207ENST00000489935 POLR3AO14802 1390 aaPredicted RBP35.1■■■■□ 3.21
KCNC4-207ENST00000489935 SRPK2P78362 688 aaKnown RBP35.09■■■■□ 3.21
KCNC4-207ENST00000489935 CCDC146Q8IYE0 955 aa35.09■■■■□ 3.21
KCNC4-207ENST00000489935 ZNF521Q96K83 1311 aa35.09■■■■□ 3.21
KCNC4-207ENST00000489935 SETD1AO15047 1707 aaKnown RBP35.08■■■■□ 3.21
KCNC4-207ENST00000489935 TNNT2P45379 298 aaPredicted RBP35.08■■■■□ 3.21
KCNC4-207ENST00000489935 NINLQ9Y2I6 1382 aa35.03■■■■□ 3.2
KCNC4-207ENST00000489935 A0A1W2PP64 1363 aa35.02■■■■□ 3.2
KCNC4-207ENST00000489935 SHPRHQ149N8 1683 aa35.01■■■■□ 3.2
KCNC4-207ENST00000489935 ATAD2Q6PL18 1390 aa35■■■■□ 3.19
KCNC4-207ENST00000489935 NRXN3Q9Y4C0 1643 aa35■■■■□ 3.19
KCNC4-207ENST00000489935 APAF1O14727 1248 aa35■■■■□ 3.19
KCNC4-207ENST00000489935 NSD2O96028 1365 aa34.99■■■■□ 3.19
KCNC4-207ENST00000489935 DLC1Q96QB1 1528 aa34.99■■■■□ 3.19
KCNC4-207ENST00000489935 CDK19Q9BWU1 502 aa34.98■■■■□ 3.19
KCNC4-207ENST00000489935 TNRQ92752 1358 aa34.97■■■■□ 3.19
KCNC4-207ENST00000489935 DUSP27Q5VZP5 1158 aa34.97■■■■□ 3.19
KCNC4-207ENST00000489935 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.97■■■■□ 3.19
KCNC4-207ENST00000489935 GOLGA2Q08379 1002 aa34.96■■■■□ 3.19
KCNC4-207ENST00000489935 WAPLQ7Z5K2 1190 aa34.96■■■■□ 3.19
KCNC4-207ENST00000489935 MTHFSP49914 203 aa34.96■■■■□ 3.19
KCNC4-207ENST00000489935 CD163L1Q9NR16 1453 aa34.96■■■■□ 3.19
KCNC4-207ENST00000489935 ABCC11Q96J66 1382 aa34.95■■■■□ 3.19
KCNC4-207ENST00000489935 RBM19Q9Y4C8 960 aaKnown RBP34.95■■■■□ 3.19
KCNC4-207ENST00000489935 CCDC136Q96JN2 1154 aa34.94■■■■□ 3.18
KCNC4-207ENST00000489935 EXOC6Q8TAG9 804 aa34.91■■■■□ 3.18
KCNC4-207ENST00000489935 SLFN5Q08AF3 891 aa34.91■■■■□ 3.18
KCNC4-207ENST00000489935 TERF2IPQ9NYB0 399 aa34.91■■■■□ 3.18
KCNC4-207ENST00000489935 METP08581 1390 aa34.9■■■■□ 3.18
KCNC4-207ENST00000489935 UBR1Q8IWV7 1749 aa34.89■■■■□ 3.18
KCNC4-207ENST00000489935 PLIN1O60240 522 aa34.88■■■■□ 3.17
KCNC4-207ENST00000489935 TRMT2AQ8IZ69 625 aaKnown RBP34.88■■■■□ 3.17
KCNC4-207ENST00000489935 SPINK5Q9NQ38 1064 aaPredicted RBP34.86■■■■□ 3.17
KCNC4-207ENST00000489935 CABP1Q9NZU7 370 aa34.86■■■■□ 3.17
KCNC4-207ENST00000489935 HDGFP51858 240 aaKnown RBP34.85■■■■□ 3.17
KCNC4-207ENST00000489935 GGNBP2Q9H3C7 697 aa34.85■■■■□ 3.17
KCNC4-207ENST00000489935 FYB1O15117 783 aa34.84■■■■□ 3.17
KCNC4-207ENST00000489935 CFAP53Q96M91 514 aa34.84■■■■□ 3.17
KCNC4-207ENST00000489935 NGEFQ8N5V2 710 aa34.83■■■■□ 3.17
KCNC4-207ENST00000489935 TMEM2Q9UHN6 1383 aa34.83■■■■□ 3.17
KCNC4-207ENST00000489935 ANKRD26Q9UPS8 1709 aa34.82■■■■□ 3.17
KCNC4-207ENST00000489935 NLRP1Q9C000 1473 aa34.82■■■■□ 3.16
KCNC4-207ENST00000489935 HDGFL2Q7Z4V5 671 aaPredicted RBP34.81■■■■□ 3.16
KCNC4-207ENST00000489935 DMRT2Q9Y5R5 561 aa34.8■■■■□ 3.16
KCNC4-207ENST00000489935 TXNDC2Q86VQ3 553 aa34.8■■■■□ 3.16
KCNC4-207ENST00000489935 RUNDC1Q96C34 613 aa34.8■■■■□ 3.16
KCNC4-207ENST00000489935 CEBPAP49715 358 aaPredicted RBP34.78■■■■□ 3.16
KCNC4-207ENST00000489935 MED14O60244 1454 aa34.78■■■■□ 3.16
KCNC4-207ENST00000489935 KNDC1Q76NI1 1749 aa34.76■■■■□ 3.16
KCNC4-207ENST00000489935 WWC1Q8IX03 1113 aa34.75■■■■□ 3.15
KCNC4-207ENST00000489935 E9PSI1 815 aa34.74■■■■□ 3.15
KCNC4-207ENST00000489935 IQSEC2Q5JU85 1478 aa34.74■■■■□ 3.15
KCNC4-207ENST00000489935 WASLO00401 505 aaPredicted RBP34.73■■■■□ 3.15
KCNC4-207ENST00000489935 KIF20BQ96Q89 1820 aa34.73■■■■□ 3.15
KCNC4-207ENST00000489935 TECPR2O15040 1411 aa34.73■■■■□ 3.15
KCNC4-207ENST00000489935 TCP11L2Q8N4U5 519 aa34.73■■■■□ 3.15
KCNC4-207ENST00000489935 SIRT1Q96EB6 747 aa34.73■■■■□ 3.15
KCNC4-207ENST00000489935 CRBNQ96SW2 442 aa34.71■■■■□ 3.15
KCNC4-207ENST00000489935 NKTRP30414 1462 aaKnown RBP34.71■■■■□ 3.15
KCNC4-207ENST00000489935 FAM135BQ49AJ0 1406 aa34.71■■■■□ 3.15
KCNC4-207ENST00000489935 ATP7BP35670 1465 aa34.7■■■■□ 3.15
KCNC4-207ENST00000489935 C20orf194Q5TEA3 1177 aa34.7■■■■□ 3.15
KCNC4-207ENST00000489935 RRP7AQ9Y3A4 280 aaKnown RBP34.7■■■■□ 3.15
KCNC4-207ENST00000489935 C3P01024 1663 aa34.69■■■■□ 3.14
KCNC4-207ENST00000489935 LTKP29376 864 aa34.69■■■■□ 3.14
KCNC4-207ENST00000489935 ADAMTS13Q76LX8 1427 aa34.69■■■■□ 3.14
KCNC4-207ENST00000489935 NEUROD2Q15784 382 aa34.69■■■■□ 3.14
KCNC4-207ENST00000489935 CPS1P31327 1500 aa34.68■■■■□ 3.14
KCNC4-207ENST00000489935 U2AF1L5P0DN76 240 aaPredicted RBP34.67■■■■□ 3.14
KCNC4-207ENST00000489935 U2AF1Q01081 240 aaKnown RBP eCLIP34.67■■■■□ 3.14
KCNC4-207ENST00000489935 COL3A1P02461 1466 aaPredicted RBP34.67■■■■□ 3.14
KCNC4-207ENST00000489935 PHF23Q9BUL5 403 aaPredicted RBP34.67■■■■□ 3.14
KCNC4-207ENST00000489935 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.65■■■■□ 3.14
KCNC4-207ENST00000489935 PPIP5K1Q6PFW1 1433 aa34.63■■■■□ 3.13
KCNC4-207ENST00000489935 PLEKHG1Q9ULL1 1385 aa34.63■■■■□ 3.13
KCNC4-207ENST00000489935 CPSF1Q10570 1443 aaKnown RBP34.62■■■■□ 3.13
KCNC4-207ENST00000489935 FER1L4A9Z1Z3 1794 aa34.62■■■■□ 3.13
KCNC4-207ENST00000489935 NUDT16Q96DE0 195 aaKnown RBP34.62■■■■□ 3.13
KCNC4-207ENST00000489935 ROBO2Q9HCK4 1378 aa34.61■■■■□ 3.13
KCNC4-207ENST00000489935 TRHP20396 242 aaPredicted RBP34.61■■■■□ 3.13
KCNC4-207ENST00000489935 PLPPR3Q6T4P5 718 aa34.59■■■■□ 3.13
KCNC4-207ENST00000489935 NCKAP5LQ9HCH0 1330 aa34.59■■■■□ 3.13
KCNC4-207ENST00000489935 CCDC27Q2M243 656 aa34.58■■■■□ 3.13
KCNC4-207ENST00000489935 ADGRB2O60241 1585 aa34.57■■■■□ 3.12
KCNC4-207ENST00000489935 PNPLA6Q8IY17 1366 aa34.57■■■■□ 3.12
KCNC4-207ENST00000489935 GOLGA6L2Q8N9W4 650 aaPredicted RBP34.57■■■■□ 3.12
KCNC4-207ENST00000489935 U2SURPO15042 1029 aaKnown RBP34.56■■■■□ 3.12
KCNC4-207ENST00000489935 BCAR3O75815 825 aa34.56■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms