RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 SCAPERQ9BY12 1400 aa13.05□□□□□ -0.32
RAB3GAP1-205ENST00000489858 ZBED9Q6R2W3 1325 aa13.05□□□□□ -0.32
RAB3GAP1-205ENST00000489858 MROH1Q8NDA8 1641 aa13.05□□□□□ -0.32
RAB3GAP1-205ENST00000489858 IQGAP1P46940 1657 aa13.05□□□□□ -0.32
RAB3GAP1-205ENST00000489858 PTPRTO14522 1441 aa13.05□□□□□ -0.32
RAB3GAP1-205ENST00000489858 ST20-MTHFSA0A0A6YYL1 179 aa13.04□□□□□ -0.32
RAB3GAP1-205ENST00000489858 CCDC184Q52MB2 194 aa13.04□□□□□ -0.32
RAB3GAP1-205ENST00000489858 ZNF518AQ6AHZ1 1483 aa13.04□□□□□ -0.32
RAB3GAP1-205ENST00000489858 KIDINS220Q9ULH0 1771 aa13.03□□□□□ -0.32
RAB3GAP1-205ENST00000489858 RGL3Q3MIN7 710 aa13.03□□□□□ -0.32
RAB3GAP1-205ENST00000489858 AFAP1Q8N556 730 aa13.03□□□□□ -0.32
RAB3GAP1-205ENST00000489858 EFCAB6Q5THR3 1501 aa13.03□□□□□ -0.32
RAB3GAP1-205ENST00000489858 FAM9BQ8IZU0 186 aa13.02□□□□□ -0.33
RAB3GAP1-205ENST00000489858 EFCAB3Q8N7B9 438 aa13.02□□□□□ -0.33
RAB3GAP1-205ENST00000489858 KIAA1210Q9ULL0 1709 aa13.02□□□□□ -0.33
RAB3GAP1-205ENST00000489858 EMP3P54852 163 aa13.01□□□□□ -0.33
RAB3GAP1-205ENST00000489858 BCANQ96GW7 911 aa13.01□□□□□ -0.33
RAB3GAP1-205ENST00000489858 LMTK2Q8IWU2 1503 aa13.01□□□□□ -0.33
RAB3GAP1-205ENST00000489858 HECW2Q9P2P5 1572 aa13□□□□□ -0.33
RAB3GAP1-205ENST00000489858 STAC3Q96MF2 364 aa13□□□□□ -0.33
RAB3GAP1-205ENST00000489858 POGZQ7Z3K3 1410 aa12.99□□□□□ -0.33
RAB3GAP1-205ENST00000489858 RALBP1Q15311 655 aa12.99□□□□□ -0.33
RAB3GAP1-205ENST00000489858 BRD4O60885 1362 aaPredicted RBP12.98□□□□□ -0.33
RAB3GAP1-205ENST00000489858 KIF1BO60333 1816 aa12.98□□□□□ -0.33
RAB3GAP1-205ENST00000489858 RIOK3O14730 519 aaKnown RBP12.98□□□□□ -0.33
RAB3GAP1-205ENST00000489858 PPRC1Q5VV67 1664 aaKnown RBP12.98□□□□□ -0.33
RAB3GAP1-205ENST00000489858 MYOM2P54296 1465 aa12.97□□□□□ -0.33
RAB3GAP1-205ENST00000489858 IFT172Q9UG01 1749 aa12.97□□□□□ -0.33
RAB3GAP1-205ENST00000489858 MYBBP1AQ9BQG0 1328 aaKnown RBP12.97□□□□□ -0.33
RAB3GAP1-205ENST00000489858 NBPF1Q3BBV0 1214 aa12.97□□□□□ -0.33
RAB3GAP1-205ENST00000489858 SPNS2Q8IVW8 549 aa12.97□□□□□ -0.33
RAB3GAP1-205ENST00000489858 MYT1LQ9UL68 1186 aa12.97□□□□□ -0.33
RAB3GAP1-205ENST00000489858 ERICH6BQ5W0A0 696 aa12.96□□□□□ -0.33
RAB3GAP1-205ENST00000489858 MLH3Q9UHC1 1453 aa12.96□□□□□ -0.34
RAB3GAP1-205ENST00000489858 CD109Q6YHK3 1445 aa12.96□□□□□ -0.34
RAB3GAP1-205ENST00000489858 DISP3Q9P2K9 1392 aa12.95□□□□□ -0.34
RAB3GAP1-205ENST00000489858 MAP3K4Q9Y6R4 1608 aa12.95□□□□□ -0.34
RAB3GAP1-205ENST00000489858 KIF3BO15066 747 aa12.95□□□□□ -0.34
RAB3GAP1-205ENST00000489858 TMF1P82094 1093 aa12.95□□□□□ -0.34
RAB3GAP1-205ENST00000489858 RNF25Q96BH1 459 aaPredicted RBP12.95□□□□□ -0.34
RAB3GAP1-205ENST00000489858 SCAF11Q99590 1463 aaKnown RBP12.95□□□□□ -0.34
RAB3GAP1-205ENST00000489858 SMG6Q86US8 1419 aaKnown RBP12.95□□□□□ -0.34
RAB3GAP1-205ENST00000489858 PARD3Q8TEW0 1356 aa12.94□□□□□ -0.34
RAB3GAP1-205ENST00000489858 SYNMO15061 1565 aa12.94□□□□□ -0.34
RAB3GAP1-205ENST00000489858 NEO1Q92859 1461 aa12.94□□□□□ -0.34
RAB3GAP1-205ENST00000489858 SOX12O15370 315 aa12.94□□□□□ -0.34
RAB3GAP1-205ENST00000489858 HOXB3P14651 431 aaPredicted RBP12.94□□□□□ -0.34
RAB3GAP1-205ENST00000489858 TMC1Q8TDI8 760 aa12.94□□□□□ -0.34
RAB3GAP1-205ENST00000489858 ABCA6Q8N139 1617 aa12.94□□□□□ -0.34
RAB3GAP1-205ENST00000489858 FRMPD1Q5SYB0 1578 aa12.94□□□□□ -0.34
RAB3GAP1-205ENST00000489858 EIF3AQ14152 1382 aaKnown RBP12.94□□□□□ -0.34
RAB3GAP1-205ENST00000489858 MROH2AA6NES4 1674 aa12.93□□□□□ -0.34
RAB3GAP1-205ENST00000489858 VGFO15240 615 aaPredicted RBP12.93□□□□□ -0.34
RAB3GAP1-205ENST00000489858 MMRN1Q13201 1228 aa12.93□□□□□ -0.34
RAB3GAP1-205ENST00000489858 HS3ST6Q96QI5 342 aa12.93□□□□□ -0.34
RAB3GAP1-205ENST00000489858 TESK2Q96S53 571 aa12.93□□□□□ -0.34
RAB3GAP1-205ENST00000489858 LRPPRCP42704 1394 aaKnown RBP12.93□□□□□ -0.34
RAB3GAP1-205ENST00000489858 ADGRB3O60242 1522 aa12.93□□□□□ -0.34
RAB3GAP1-205ENST00000489858 WASHC2CQ9Y4E1 1318 aa12.92□□□□□ -0.34
RAB3GAP1-205ENST00000489858 CNGB1Q14028 1251 aaPredicted RBP12.92□□□□□ -0.34
RAB3GAP1-205ENST00000489858 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.91□□□□□ -0.34
RAB3GAP1-205ENST00000489858 POTEB3A0JP26 581 aa12.91□□□□□ -0.34
RAB3GAP1-205ENST00000489858 FAM205CA6NFA0 338 aa12.91□□□□□ -0.34
RAB3GAP1-205ENST00000489858 POTEBQ6S5H4 581 aa12.91□□□□□ -0.34
RAB3GAP1-205ENST00000489858 ZFP91Q96JP5 570 aaPredicted RBP12.91□□□□□ -0.34
RAB3GAP1-205ENST00000489858 TSHZ2Q9NRE2 1034 aa12.91□□□□□ -0.34
RAB3GAP1-205ENST00000489858 KDM5AP29375 1690 aaKnown RBP12.91□□□□□ -0.34
RAB3GAP1-205ENST00000489858 ZMYM4Q5VZL5 1548 aa12.91□□□□□ -0.34
RAB3GAP1-205ENST00000489858 UGGT1Q9NYU2 1555 aa12.9□□□□□ -0.34
RAB3GAP1-205ENST00000489858 NLRP13Q86W25 1043 aa12.9□□□□□ -0.34
RAB3GAP1-205ENST00000489858 PNISRQ8TF01 805 aaKnown RBP12.9□□□□□ -0.34
RAB3GAP1-205ENST00000489858 CAMSAP1Q5T5Y3 1602 aa12.89□□□□□ -0.35
RAB3GAP1-205ENST00000489858 DOK7Q18PE1 504 aa12.89□□□□□ -0.35
RAB3GAP1-205ENST00000489858 CDCA8Q53HL2 280 aa12.89□□□□□ -0.35
RAB3GAP1-205ENST00000489858 ZC3H13Q5T200 1668 aaKnown RBP12.89□□□□□ -0.35
RAB3GAP1-205ENST00000489858 ABCC3O15438 1527 aa12.88□□□□□ -0.35
RAB3GAP1-205ENST00000489858 MYO3AQ8NEV4 1616 aa12.88□□□□□ -0.35
RAB3GAP1-205ENST00000489858 HOXB1P14653 301 aaPredicted RBP12.88□□□□□ -0.35
RAB3GAP1-205ENST00000489858 MICALL2Q8IY33 904 aa12.88□□□□□ -0.35
RAB3GAP1-205ENST00000489858 NUDCQ9Y266 331 aa12.88□□□□□ -0.35
RAB3GAP1-205ENST00000489858 INSRP06213 1382 aa12.88□□□□□ -0.35
RAB3GAP1-205ENST00000489858 DIP2CQ9Y2E4 1556 aa12.88□□□□□ -0.35
RAB3GAP1-205ENST00000489858 MYOM1P52179 1685 aa12.88□□□□□ -0.35
RAB3GAP1-205ENST00000489858 SETBP1Q9Y6X0 1596 aa12.87□□□□□ -0.35
RAB3GAP1-205ENST00000489858 NRXN1Q9ULB1 1477 aa12.87□□□□□ -0.35
RAB3GAP1-205ENST00000489858 ZNF710Q8N1W2 664 aa12.87□□□□□ -0.35
RAB3GAP1-205ENST00000489858 PPLO60437 1756 aa12.86□□□□□ -0.35
RAB3GAP1-205ENST00000489858 RICTORQ6R327 1708 aa12.86□□□□□ -0.35
RAB3GAP1-205ENST00000489858 KRTAP3-3Q9BYR6 98 aa12.86□□□□□ -0.35
RAB3GAP1-205ENST00000489858 KRTAP3-2Q9BYR7 98 aa12.86□□□□□ -0.35
RAB3GAP1-205ENST00000489858 GLI2P10070 1586 aa12.86□□□□□ -0.35
RAB3GAP1-205ENST00000489858 MS4A4AQ96JQ5 239 aa12.85□□□□□ -0.35
RAB3GAP1-205ENST00000489858 PPP4R2Q9NY27 417 aa12.85□□□□□ -0.35
RAB3GAP1-205ENST00000489858 PER1O15534 1290 aaPredicted RBP12.84□□□□□ -0.35
RAB3GAP1-205ENST00000489858 SLC24A1O60721 1099 aa12.84□□□□□ -0.35
RAB3GAP1-205ENST00000489858 IRX6P78412 446 aaPredicted RBP12.84□□□□□ -0.35
RAB3GAP1-205ENST00000489858 PANK3Q9H999 370 aa12.84□□□□□ -0.35
RAB3GAP1-205ENST00000489858 NPATQ14207 1427 aa12.84□□□□□ -0.35
RAB3GAP1-205ENST00000489858 ASXL1Q8IXJ9 1541 aa12.83□□□□□ -0.35
RAB3GAP1-205ENST00000489858 BLMP54132 1417 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms