RNA–Protein interactions for RNA: ENST00000489842.1

GTF3C5-210, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 2

Gene GTF3C5, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-210ENST00000489842 PIK3C2GO75747 1445 aa13.54□□□□□ -0.24
GTF3C5-210ENST00000489842 LRRC59Q96AG4 307 aaKnown RBP13.53□□□□□ -0.24
GTF3C5-210ENST00000489842 PRAG1Q86YV5 1406 aa13.53□□□□□ -0.24
GTF3C5-210ENST00000489842 SAFB2Q14151 953 aaKnown RBP eCLIP13.52□□□□□ -0.25
GTF3C5-210ENST00000489842 ESCO1Q5FWF5 840 aa13.52□□□□□ -0.25
GTF3C5-210ENST00000489842 LRPPRCP42704 1394 aaKnown RBP13.52□□□□□ -0.25
GTF3C5-210ENST00000489842 LAMC1P11047 1609 aa13.52□□□□□ -0.25
GTF3C5-210ENST00000489842 RGPD8O14715 1765 aaPredicted RBP13.52□□□□□ -0.25
GTF3C5-210ENST00000489842 KNDC1Q76NI1 1749 aa13.51□□□□□ -0.25
GTF3C5-210ENST00000489842 YTHDC2Q9H6S0 1430 aaKnown RBP13.51□□□□□ -0.25
GTF3C5-210ENST00000489842 ANKRD30BQ9BXX2 1392 aa13.51□□□□□ -0.25
GTF3C5-210ENST00000489842 SOS2Q07890 1332 aaPredicted RBP13.51□□□□□ -0.25
GTF3C5-210ENST00000489842 CDC42BPGQ6DT37 1551 aa13.5□□□□□ -0.25
GTF3C5-210ENST00000489842 FOXO3O43524 673 aa13.5□□□□□ -0.25
GTF3C5-210ENST00000489842 PLEKHG5O94827 1062 aa13.49□□□□□ -0.25
GTF3C5-210ENST00000489842 ZNF772Q68DY9 489 aaPredicted RBP13.49□□□□□ -0.25
GTF3C5-210ENST00000489842 C14orf93Q9H972 538 aaKnown RBP13.49□□□□□ -0.25
GTF3C5-210ENST00000489842 KDM2AQ9Y2K7 1162 aa13.49□□□□□ -0.25
GTF3C5-210ENST00000489842 FMN2Q9NZ56 1722 aa13.49□□□□□ -0.25
GTF3C5-210ENST00000489842 TECPR2O15040 1411 aa13.48□□□□□ -0.25
GTF3C5-210ENST00000489842 ABCC11Q96J66 1382 aa13.48□□□□□ -0.25
GTF3C5-210ENST00000489842 PXDNQ92626 1479 aa13.48□□□□□ -0.25
GTF3C5-210ENST00000489842 RXRBP28702 533 aa13.47□□□□□ -0.25
GTF3C5-210ENST00000489842 NRXN1Q9ULB1 1477 aa13.47□□□□□ -0.25
GTF3C5-210ENST00000489842 NGLY1Q96IV0 654 aa13.46□□□□□ -0.25
GTF3C5-210ENST00000489842 QTRT2Q9H974 415 aaKnown RBP13.46□□□□□ -0.25
GTF3C5-210ENST00000489842 MYOM2P54296 1465 aa13.45□□□□□ -0.26
GTF3C5-210ENST00000489842 UPF1Q92900 1129 aaKnown RBP eCLIP13.45□□□□□ -0.268e-9■■■□□ 18.2
GTF3C5-210ENST00000489842 PRAM1Q96QH2 718 aa13.45□□□□□ -0.26
GTF3C5-210ENST00000489842 RGS12O14924 1447 aa13.45□□□□□ -0.26
GTF3C5-210ENST00000489842 COL22A1Q8NFW1 1626 aaPredicted RBP13.44□□□□□ -0.26
GTF3C5-210ENST00000489842 HIRIP3Q9BW71 556 aaPredicted RBP13.44□□□□□ -0.26
GTF3C5-210ENST00000489842 TRAK1Q9UPV9 953 aa13.44□□□□□ -0.26
GTF3C5-210ENST00000489842 DHX57Q6P158 1386 aaKnown RBP13.43□□□□□ -0.26
GTF3C5-210ENST00000489842 USP32Q8NFA0 1604 aa13.42□□□□□ -0.26
GTF3C5-210ENST00000489842 NPHP3Q7Z494 1330 aa13.42□□□□□ -0.26
GTF3C5-210ENST00000489842 ADGRB1O14514 1584 aa13.42□□□□□ -0.26
GTF3C5-210ENST00000489842 DCAF11Q8TEB1 546 aa13.42□□□□□ -0.26
GTF3C5-210ENST00000489842 USP21Q9UK80 565 aa13.42□□□□□ -0.26
GTF3C5-210ENST00000489842 MARF1Q9Y4F3 1742 aaKnown RBP13.42□□□□□ -0.26
GTF3C5-210ENST00000489842 KRT28Q7Z3Y7 464 aa13.41□□□□□ -0.26
GTF3C5-210ENST00000489842 PMFBP1Q8TBY8 1022 aa13.41□□□□□ -0.26
GTF3C5-210ENST00000489842 CABLES1Q8TDN4 633 aa13.41□□□□□ -0.26
GTF3C5-210ENST00000489842 MINK1Q8N4C8 1332 aaPredicted RBP13.4□□□□□ -0.26
GTF3C5-210ENST00000489842 POGKQ9P215 609 aa13.4□□□□□ -0.26
GTF3C5-210ENST00000489842 RBM6P78332 1123 aaKnown RBP13.39□□□□□ -0.27
GTF3C5-210ENST00000489842 PHF8Q9UPP1 1060 aa13.39□□□□□ -0.27
GTF3C5-210ENST00000489842 SPATA31A3Q5VYP0 1347 aa13.39□□□□□ -0.27
GTF3C5-210ENST00000489842 KIF1AQ12756 1690 aa13.38□□□□□ -0.27
GTF3C5-210ENST00000489842 SIRT1Q96EB6 747 aa13.38□□□□□ -0.27
GTF3C5-210ENST00000489842 PRR36Q9H6K5 1346 aa13.38□□□□□ -0.27
GTF3C5-210ENST00000489842 BCL9LQ86UU0 1499 aa13.37□□□□□ -0.27
GTF3C5-210ENST00000489842 CDK12Q9NYV4 1490 aaPredicted RBP13.37□□□□□ -0.27
GTF3C5-210ENST00000489842 LMOD2Q6P5Q4 547 aa13.37□□□□□ -0.27
GTF3C5-210ENST00000489842 FNBP4Q8N3X1 1017 aaPredicted RBP13.37□□□□□ -0.27
GTF3C5-210ENST00000489842 ATRNO75882 1429 aa13.37□□□□□ -0.27
GTF3C5-210ENST00000489842 DLC1Q96QB1 1528 aa13.36□□□□□ -0.27
GTF3C5-210ENST00000489842 ARHGEF28Q8N1W1 1705 aaKnown RBP13.35□□□□□ -0.27
GTF3C5-210ENST00000489842 ABCA3Q99758 1704 aa13.35□□□□□ -0.27
GTF3C5-210ENST00000489842 TRPC5Q9UL62 973 aaPredicted RBP13.34□□□□□ -0.27
GTF3C5-210ENST00000489842 ADGRB2O60241 1585 aa13.33□□□□□ -0.28
GTF3C5-210ENST00000489842 TNS3Q68CZ2 1445 aa13.33□□□□□ -0.28
GTF3C5-210ENST00000489842 PSME1Q06323 249 aa13.33□□□□□ -0.28
GTF3C5-210ENST00000489842 NBPF1Q3BBV0 1214 aa13.33□□□□□ -0.28
GTF3C5-210ENST00000489842 ACIN1Q9UKV3 1341 aaKnown RBP13.33□□□□□ -0.28
GTF3C5-210ENST00000489842 TRPM3Q9HCF6 1732 aaPredicted RBP13.33□□□□□ -0.28
GTF3C5-210ENST00000489842 GLI3P10071 1580 aa13.32□□□□□ -0.28
GTF3C5-210ENST00000489842 HRCP23327 699 aa13.31□□□□□ -0.28
GTF3C5-210ENST00000489842 PLCH1Q4KWH8 1693 aa13.31□□□□□ -0.28
GTF3C5-210ENST00000489842 BRWD3Q6RI45 1802 aa13.3□□□□□ -0.28
GTF3C5-210ENST00000489842 SLIT2O94813 1529 aa13.3□□□□□ -0.28
GTF3C5-210ENST00000489842 WASLO00401 505 aaPredicted RBP13.3□□□□□ -0.28
GTF3C5-210ENST00000489842 HAP1P54257 671 aaPredicted RBP13.3□□□□□ -0.28
GTF3C5-210ENST00000489842 SIN3AQ96ST3 1273 aa13.3□□□□□ -0.28
GTF3C5-210ENST00000489842 RALGAPBQ86X10 1494 aa13.29□□□□□ -0.28
GTF3C5-210ENST00000489842 TULP4Q9NRJ4 1543 aa13.29□□□□□ -0.28
GTF3C5-210ENST00000489842 ALS2Q96Q42 1657 aa13.29□□□□□ -0.28
GTF3C5-210ENST00000489842 UNC5CLQ8IV45 518 aa13.29□□□□□ -0.28
GTF3C5-210ENST00000489842 GJD4Q96KN9 370 aaPredicted RBP13.29□□□□□ -0.28
GTF3C5-210ENST00000489842 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.29□□□□□ -0.28
GTF3C5-210ENST00000489842 ANKARQ7Z5J8 1434 aa13.29□□□□□ -0.28
GTF3C5-210ENST00000489842 FAM83GA6ND36 823 aa13.28□□□□□ -0.28
GTF3C5-210ENST00000489842 SBNO1A3KN83 1393 aa13.28□□□□□ -0.28
GTF3C5-210ENST00000489842 NUTM2GQ5VZR2 741 aa13.27□□□□□ -0.29
GTF3C5-210ENST00000489842 ATP7BP35670 1465 aa13.27□□□□□ -0.29
GTF3C5-210ENST00000489842 EP400Q96L91 3159 aa13.26□□□□□ -0.29
GTF3C5-210ENST00000489842 PAK3O75914 559 aaPredicted RBP13.26□□□□□ -0.29
GTF3C5-210ENST00000489842 NGDNQ8NEJ9 315 aaKnown RBP13.26□□□□□ -0.29
GTF3C5-210ENST00000489842 NUDT16Q96DE0 195 aaKnown RBP13.26□□□□□ -0.29
GTF3C5-210ENST00000489842 CDK19Q9BWU1 502 aa13.26□□□□□ -0.29
GTF3C5-210ENST00000489842 CCDC9Q9Y3X0 531 aaKnown RBP13.26□□□□□ -0.29
GTF3C5-210ENST00000489842 CRYBG1Q9Y4K1 1723 aa13.26□□□□□ -0.29
GTF3C5-210ENST00000489842 NRAPQ86VF7 1730 aa13.25□□□□□ -0.29
GTF3C5-210ENST00000489842 ATAD2Q6PL18 1390 aa13.25□□□□□ -0.29
GTF3C5-210ENST00000489842 NEUROD1Q13562 356 aa13.24□□□□□ -0.29
GTF3C5-210ENST00000489842 KIAA1210Q9ULL0 1709 aa13.24□□□□□ -0.29
GTF3C5-210ENST00000489842 ARHGEF10O15013 1369 aa13.23□□□□□ -0.29
GTF3C5-210ENST00000489842 ITSN1Q15811 1721 aa13.23□□□□□ -0.29
GTF3C5-210ENST00000489842 NWD2Q9ULI1 1742 aa13.23□□□□□ -0.29
GTF3C5-210ENST00000489842 L3MBTL2Q969R5 705 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms