RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 TULP4Q9NRJ4 1543 aa15.42■□□□□ 0.06
TFF3-203ENST00000489676 CENPJQ9HC77 1338 aaPredicted RBP15.42■□□□□ 0.06
TFF3-203ENST00000489676 CDC42BPGQ6DT37 1551 aa15.41■□□□□ 0.06
TFF3-203ENST00000489676 HSPA5P11021 654 aaKnown RBP15.41■□□□□ 0.06
TFF3-203ENST00000489676 EIF4G2P78344 907 aaKnown RBP eCLIP15.41■□□□□ 0.06
TFF3-203ENST00000489676 ADGRL3Q9HAR2 1447 aa15.41■□□□□ 0.06
TFF3-203ENST00000489676 NCOA3Q9Y6Q9 1424 aa15.41■□□□□ 0.06
TFF3-203ENST00000489676 WAPLQ7Z5K2 1190 aa15.4■□□□□ 0.06
TFF3-203ENST00000489676 TESK2Q96S53 571 aa15.4■□□□□ 0.06
TFF3-203ENST00000489676 TMEM94Q12767 1356 aa15.39■□□□□ 0.05
TFF3-203ENST00000489676 ST20-MTHFSA0A0A6YYL1 179 aa15.39■□□□□ 0.05
TFF3-203ENST00000489676 FMN2Q9NZ56 1722 aa15.37■□□□□ 0.05
TFF3-203ENST00000489676 DCCP43146 1447 aa15.36■□□□□ 0.05
TFF3-203ENST00000489676 PROSER2Q86WR7 435 aaPredicted RBP15.36■□□□□ 0.05
TFF3-203ENST00000489676 POGKQ9P215 609 aa15.36■□□□□ 0.05
TFF3-203ENST00000489676 SAFB2Q14151 953 aaKnown RBP eCLIP15.35■□□□□ 0.05
TFF3-203ENST00000489676 USP32Q8NFA0 1604 aa15.35■□□□□ 0.05
TFF3-203ENST00000489676 RBM33Q96EV2 1170 aaKnown RBP15.34■□□□□ 0.05
TFF3-203ENST00000489676 TOPAZ1Q8N9V7 1692 aa15.33■□□□□ 0.04
TFF3-203ENST00000489676 HIRIP3Q9BW71 556 aaPredicted RBP15.33■□□□□ 0.04
TFF3-203ENST00000489676 MINK1Q8N4C8 1332 aaPredicted RBP15.33■□□□□ 0.04
TFF3-203ENST00000489676 IQSEC2Q5JU85 1478 aa15.33■□□□□ 0.04
TFF3-203ENST00000489676 ATP7BP35670 1465 aa15.32■□□□□ 0.04
TFF3-203ENST00000489676 MYOM1P52179 1685 aa15.32■□□□□ 0.04
TFF3-203ENST00000489676 ANKARQ7Z5J8 1434 aa15.29■□□□□ 0.04
TFF3-203ENST00000489676 MSH6P52701 1360 aa15.29■□□□□ 0.04
TFF3-203ENST00000489676 WASLO00401 505 aaPredicted RBP15.29■□□□□ 0.04
TFF3-203ENST00000489676 MST1RQ04912 1400 aa15.28■□□□□ 0.04
TFF3-203ENST00000489676 EVC2Q86UK5 1308 aa15.28■□□□□ 0.04
TFF3-203ENST00000489676 C11orf95C9JLR9 678 aaPredicted RBP15.28■□□□□ 0.04
TFF3-203ENST00000489676 C19orf44Q9H6X5 657 aa15.28■□□□□ 0.04
TFF3-203ENST00000489676 ITSN1Q15811 1721 aa15.28■□□□□ 0.04
TFF3-203ENST00000489676 SLC24A1O60721 1099 aa15.27■□□□□ 0.04
TFF3-203ENST00000489676 TMF1P82094 1093 aa15.27■□□□□ 0.04
TFF3-203ENST00000489676 RGPD8O14715 1765 aaPredicted RBP15.26■□□□□ 0.03
TFF3-203ENST00000489676 PRR36Q9H6K5 1346 aa15.26■□□□□ 0.03
TFF3-203ENST00000489676 PUS7Q96PZ0 661 aaKnown RBP15.26■□□□□ 0.03
TFF3-203ENST00000489676 CCDC7Q96M83 1385 aa15.25■□□□□ 0.03
TFF3-203ENST00000489676 KIF7Q2M1P5 1343 aa15.25■□□□□ 0.03
TFF3-203ENST00000489676 C14orf37Q86TY3 774 aa15.25■□□□□ 0.03
TFF3-203ENST00000489676 CDK19Q9BWU1 502 aa15.25■□□□□ 0.03
TFF3-203ENST00000489676 ATAD2Q6PL18 1390 aa15.24■□□□□ 0.03
TFF3-203ENST00000489676 WASHC2AQ641Q2 1341 aa15.24■□□□□ 0.03
TFF3-203ENST00000489676 C1orf167Q5SNV9 1468 aa15.24■□□□□ 0.03
TFF3-203ENST00000489676 CABP2Q9NPB3 220 aa15.23■□□□□ 0.03
TFF3-203ENST00000489676 KIF1AQ12756 1690 aa15.22■□□□□ 0.03
TFF3-203ENST00000489676 CADPS2Q86UW7 1296 aa15.22■□□□□ 0.03
TFF3-203ENST00000489676 CD163L1Q9NR16 1453 aa15.21■□□□□ 0.03
TFF3-203ENST00000489676 SRPK2P78362 688 aaKnown RBP15.21■□□□□ 0.03
TFF3-203ENST00000489676 CDCA8Q53HL2 280 aa15.21■□□□□ 0.03
TFF3-203ENST00000489676 NINLQ9Y2I6 1382 aa15.21■□□□□ 0.02
TFF3-203ENST00000489676 ZNF316A6NFI3 1004 aaPredicted RBP15.2■□□□□ 0.02
TFF3-203ENST00000489676 ATF3P18847 181 aa15.2■□□□□ 0.02
TFF3-203ENST00000489676 NUDT16Q96DE0 195 aaKnown RBP15.2■□□□□ 0.02
TFF3-203ENST00000489676 AKAP12Q02952 1782 aa15.2■□□□□ 0.02
TFF3-203ENST00000489676 PPIP5K1Q6PFW1 1433 aa15.19■□□□□ 0.02
TFF3-203ENST00000489676 MON2Q7Z3U7 1717 aa15.19■□□□□ 0.02
TFF3-203ENST00000489676 NRKQ7Z2Y5 1582 aa15.19■□□□□ 0.02
TFF3-203ENST00000489676 NUTM2FA1L443 756 aa15.18■□□□□ 0.02
TFF3-203ENST00000489676 ROBO1Q9Y6N7 1651 aa15.18■□□□□ 0.02
TFF3-203ENST00000489676 NHSL1Q5SYE7 1610 aa15.17■□□□□ 0.02
TFF3-203ENST00000489676 POLR3AO14802 1390 aaPredicted RBP15.17■□□□□ 0.02
TFF3-203ENST00000489676 UBAP1LF5GYI3 381 aa15.17■□□□□ 0.02
TFF3-203ENST00000489676 CCDC61Q9Y6R9 512 aa15.17■□□□□ 0.02
TFF3-203ENST00000489676 CPSF1Q10570 1443 aaKnown RBP15.17■□□□□ 0.02
TFF3-203ENST00000489676 ANKRD36BQ8N2N9 1353 aa15.15■□□□□ 0.02
TFF3-203ENST00000489676 PLEKHG3A1L390 1219 aa15.15■□□□□ 0.02
TFF3-203ENST00000489676 ORAI2Q96SN7 254 aa15.15■□□□□ 0.02
TFF3-203ENST00000489676 SLAIN2Q9P270 581 aa15.15■□□□□ 0.02
TFF3-203ENST00000489676 AHDC1Q5TGY3 1603 aaPredicted RBP15.14■□□□□ 0.01
TFF3-203ENST00000489676 A0A1W2PP64 1363 aa15.14■□□□□ 0.01
TFF3-203ENST00000489676 BRINP3Q76B58 766 aa15.14■□□□□ 0.01
TFF3-203ENST00000489676 CABP1Q9NZU7 370 aa15.14■□□□□ 0.01
TFF3-203ENST00000489676 TRPM3Q9HCF6 1732 aaPredicted RBP15.14■□□□□ 0.01
TFF3-203ENST00000489676 SLC12A5Q9H2X9 1139 aa15.13■□□□□ 0.01
TFF3-203ENST00000489676 PXDNQ92626 1479 aa15.13■□□□□ 0.01
TFF3-203ENST00000489676 MED1Q15648 1581 aaPredicted RBP15.12■□□□□ 0.01
TFF3-203ENST00000489676 USP6P35125 1406 aa15.12■□□□□ 0.01
TFF3-203ENST00000489676 SSH2Q76I76 1423 aa15.12■□□□□ 0.01
TFF3-203ENST00000489676 ESCO1Q5FWF5 840 aa15.12■□□□□ 0.01
TFF3-203ENST00000489676 PHF8Q9UPP1 1060 aa15.12■□□□□ 0.01
TFF3-203ENST00000489676 POLR3GLQ9BT43 218 aa15.11■□□□□ 0.01
TFF3-203ENST00000489676 ACEP12821 1306 aa15.11■□□□□ 0.01
TFF3-203ENST00000489676 TOM1O60784 492 aa15.1■□□□□ 0.01
TFF3-203ENST00000489676 PMFBP1Q8TBY8 1022 aa15.1■□□□□ 0.01
TFF3-203ENST00000489676 TMC1Q8TDI8 760 aa15.1■□□□□ 0.01
TFF3-203ENST00000489676 EDC4Q6P2E9 1401 aaKnown RBP15.09■□□□□ 0.01
TFF3-203ENST00000489676 COL16A1Q07092 1604 aaPredicted RBP15.09■□□□□ 0.01
TFF3-203ENST00000489676 ALS2Q96Q42 1657 aa15.09■□□□□ 0.01
TFF3-203ENST00000489676 USP54Q70EL1 1684 aa15.08■□□□□ 0
TFF3-203ENST00000489676 PIK3C2AO00443 1686 aa15.07■□□□□ 0
TFF3-203ENST00000489676 CARD14Q9BXL6 1004 aa15.07■□□□□ 0
TFF3-203ENST00000489676 TERF2IPQ9NYB0 399 aa15.07■□□□□ 0
TFF3-203ENST00000489676 NPHP3Q7Z494 1330 aa15.07■□□□□ 0
TFF3-203ENST00000489676 BRD4O60885 1362 aaPredicted RBP15.07■□□□□ 0
TFF3-203ENST00000489676 KTN1Q86UP2 1357 aaKnown RBP15.07■□□□□ 0
TFF3-203ENST00000489676 NSD3Q9BZ95 1437 aa15.07■□□□□ 0
TFF3-203ENST00000489676 MARF1Q9Y4F3 1742 aaKnown RBP15.06■□□□□ 0
TFF3-203ENST00000489676 KIF20BQ96Q89 1820 aa15.06■□□□□ 0
TFF3-203ENST00000489676 FOXO3O43524 673 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms