RNA–Protein interactions for RNA: ENST00000489551.5

CSF3R-213, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best)

Gene CSF3R, Length 787 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-213ENST00000489551 CDC42BPGQ6DT37 1551 aa15.19■□□□□ 0.02
CSF3R-213ENST00000489551 KNDC1Q76NI1 1749 aa15.18■□□□□ 0.02
CSF3R-213ENST00000489551 RGPD8O14715 1765 aaPredicted RBP15.18■□□□□ 0.02
CSF3R-213ENST00000489551 ADAMTS2O95450 1211 aa15.17■□□□□ 0.02
CSF3R-213ENST00000489551 PXDNQ92626 1479 aa15.16■□□□□ 0.02
CSF3R-213ENST00000489551 RBM6P78332 1123 aaKnown RBP15.15■□□□□ 0.02
CSF3R-213ENST00000489551 WAPLQ7Z5K2 1190 aa15.15■□□□□ 0.02
CSF3R-213ENST00000489551 TECPR2O15040 1411 aa15.15■□□□□ 0.02
CSF3R-213ENST00000489551 FMN2Q9NZ56 1722 aa15.14■□□□□ 0.01
CSF3R-213ENST00000489551 MYOM2P54296 1465 aa15.14■□□□□ 0.01
CSF3R-213ENST00000489551 EP400Q96L91 3159 aa15.14■□□□□ 0.01
CSF3R-213ENST00000489551 PLEKHH1Q9ULM0 1364 aa15.14■□□□□ 0.01
CSF3R-213ENST00000489551 RGL3Q3MIN7 710 aa15.14■□□□□ 0.01
CSF3R-213ENST00000489551 NGLY1Q96IV0 654 aa15.14■□□□□ 0.01
CSF3R-213ENST00000489551 CCDC144AA2RUR9 1427 aa15.14■□□□□ 0.01
CSF3R-213ENST00000489551 TMEM132EQ6IEE7 984 aa15.13■□□□□ 0.01
CSF3R-213ENST00000489551 MPHOSPH9Q99550 1183 aa15.13■□□□□ 0.01
CSF3R-213ENST00000489551 PIK3C2GO75747 1445 aa15.12■□□□□ 0.01
CSF3R-213ENST00000489551 ESCO1Q5FWF5 840 aa15.12■□□□□ 0.01
CSF3R-213ENST00000489551 FNBP4Q8N3X1 1017 aaPredicted RBP15.12■□□□□ 0.01
CSF3R-213ENST00000489551 STK26Q9P289 416 aa15.12■□□□□ 0.01
CSF3R-213ENST00000489551 LRPPRCP42704 1394 aaKnown RBP15.11■□□□□ 0.01
CSF3R-213ENST00000489551 NUTM2FA1L443 756 aa15.11■□□□□ 0.01
CSF3R-213ENST00000489551 XPCQ01831 940 aaPredicted RBP15.11■□□□□ 0.01
CSF3R-213ENST00000489551 ABCC11Q96J66 1382 aa15.11■□□□□ 0.01
CSF3R-213ENST00000489551 ATRNO75882 1429 aa15.1■□□□□ 0.01
CSF3R-213ENST00000489551 FOXO3O43524 673 aa15.1■□□□□ 0.01
CSF3R-213ENST00000489551 USP21Q9UK80 565 aa15.1■□□□□ 0.01
CSF3R-213ENST00000489551 ANKRD30BQ9BXX2 1392 aa15.1■□□□□ 0.01
CSF3R-213ENST00000489551 BCL9LQ86UU0 1499 aa15.09■□□□□ 0.01
CSF3R-213ENST00000489551 NPHP3Q7Z494 1330 aa15.09■□□□□ 0.01
CSF3R-213ENST00000489551 SRCAPQ6ZRS2 3230 aa15.09■□□□□ 0.01
CSF3R-213ENST00000489551 YTHDC2Q9H6S0 1430 aaKnown RBP15.09■□□□□ 0.01
CSF3R-213ENST00000489551 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.08■□□□□ 0
CSF3R-213ENST00000489551 NRXN1Q9ULB1 1477 aa15.08■□□□□ 0
CSF3R-213ENST00000489551 TRPC5Q9UL62 973 aaPredicted RBP15.07■□□□□ 0
CSF3R-213ENST00000489551 KIF1AQ12756 1690 aa15.06■□□□□ 0
CSF3R-213ENST00000489551 BRWD3Q6RI45 1802 aa15.06■□□□□ 0
CSF3R-213ENST00000489551 ABCA3Q99758 1704 aa15.04■□□□□ -0
CSF3R-213ENST00000489551 USP32Q8NFA0 1604 aa15.04■□□□□ -0
CSF3R-213ENST00000489551 GLI3P10071 1580 aa15.04■□□□□ -0
CSF3R-213ENST00000489551 C14orf93Q9H972 538 aaKnown RBP15.04■□□□□ -0
CSF3R-213ENST00000489551 SPATA31A3Q5VYP0 1347 aa15.03■□□□□ -0
CSF3R-213ENST00000489551 CFAP70Q5T0N1 1121 aa15.03■□□□□ -0
CSF3R-213ENST00000489551 SLIT2O94813 1529 aa15.02■□□□□ -0
CSF3R-213ENST00000489551 SIRT1Q96EB6 747 aa15.02■□□□□ -0
CSF3R-213ENST00000489551 ATAD2Q6PL18 1390 aa15.01□□□□□ -0.01
CSF3R-213ENST00000489551 PLCH1Q4KWH8 1693 aa15□□□□□ -0.01
CSF3R-213ENST00000489551 KRT28Q7Z3Y7 464 aa15□□□□□ -0.01
CSF3R-213ENST00000489551 ADGRB1O14514 1584 aa14.99□□□□□ -0.01
CSF3R-213ENST00000489551 GJD4Q96KN9 370 aaPredicted RBP14.99□□□□□ -0.01
CSF3R-213ENST00000489551 TRPM3Q9HCF6 1732 aaPredicted RBP14.98□□□□□ -0.01
CSF3R-213ENST00000489551 RALGAPBQ86X10 1494 aa14.98□□□□□ -0.01
CSF3R-213ENST00000489551 SAFB2Q14151 953 aaKnown RBP eCLIP14.98□□□□□ -0.01
CSF3R-213ENST00000489551 DHX57Q6P158 1386 aaKnown RBP14.98□□□□□ -0.01
CSF3R-213ENST00000489551 NWD2Q9ULI1 1742 aa14.97□□□□□ -0.01
CSF3R-213ENST00000489551 DLC1Q96QB1 1528 aa14.97□□□□□ -0.01
CSF3R-213ENST00000489551 UNC5CLQ8IV45 518 aa14.97□□□□□ -0.01
CSF3R-213ENST00000489551 CABLES1Q8TDN4 633 aa14.97□□□□□ -0.01
CSF3R-213ENST00000489551 PRAM1Q96QH2 718 aa14.97□□□□□ -0.01
CSF3R-213ENST00000489551 PHF8Q9UPP1 1060 aa14.97□□□□□ -0.01
CSF3R-213ENST00000489551 TNS3Q68CZ2 1445 aa14.97□□□□□ -0.01
CSF3R-213ENST00000489551 ADGRB2O60241 1585 aa14.97□□□□□ -0.01
CSF3R-213ENST00000489551 RAB3GAP2Q9H2M9 1393 aa14.97□□□□□ -0.01
CSF3R-213ENST00000489551 ALS2Q96Q42 1657 aa14.96□□□□□ -0.01
CSF3R-213ENST00000489551 CRYBG1Q9Y4K1 1723 aa14.95□□□□□ -0.02
CSF3R-213ENST00000489551 NRAPQ86VF7 1730 aa14.94□□□□□ -0.02
CSF3R-213ENST00000489551 PMFBP1Q8TBY8 1022 aa14.93□□□□□ -0.02
CSF3R-213ENST00000489551 SBNO1A3KN83 1393 aa14.93□□□□□ -0.02
CSF3R-213ENST00000489551 PRR36Q9H6K5 1346 aa14.92□□□□□ -0.02
CSF3R-213ENST00000489551 PLEKHG5O94827 1062 aa14.92□□□□□ -0.02
CSF3R-213ENST00000489551 ARHGEF28Q8N1W1 1705 aaKnown RBP14.92□□□□□ -0.02
CSF3R-213ENST00000489551 HIRIP3Q9BW71 556 aaPredicted RBP14.91□□□□□ -0.02
CSF3R-213ENST00000489551 ANKARQ7Z5J8 1434 aa14.91□□□□□ -0.02
CSF3R-213ENST00000489551 FAM83GA6ND36 823 aa14.9□□□□□ -0.02
CSF3R-213ENST00000489551 PSME1Q06323 249 aa14.9□□□□□ -0.02
CSF3R-213ENST00000489551 TRAK1Q9UPV9 953 aa14.9□□□□□ -0.02
CSF3R-213ENST00000489551 ONECUT3O60422 494 aaPredicted RBP14.89□□□□□ -0.03
CSF3R-213ENST00000489551 VPS72Q15906 364 aa14.89□□□□□ -0.03
CSF3R-213ENST00000489551 SEPT12Q8IYM1 358 aa14.89□□□□□ -0.03
CSF3R-213ENST00000489551 POGKQ9P215 609 aa14.89□□□□□ -0.03
CSF3R-213ENST00000489551 KDM2AQ9Y2K7 1162 aa14.89□□□□□ -0.03
CSF3R-213ENST00000489551 ACIN1Q9UKV3 1341 aaKnown RBP14.89□□□□□ -0.03
CSF3R-213ENST00000489551 TULP4Q9NRJ4 1543 aa14.88□□□□□ -0.03
CSF3R-213ENST00000489551 LMOD2Q6P5Q4 547 aa14.88□□□□□ -0.03
CSF3R-213ENST00000489551 CCDC125Q86Z20 511 aa14.88□□□□□ -0.03
CSF3R-213ENST00000489551 MINK1Q8N4C8 1332 aaPredicted RBP14.88□□□□□ -0.03
CSF3R-213ENST00000489551 ARHGEF10O15013 1369 aa14.87□□□□□ -0.03
CSF3R-213ENST00000489551 DCAF11Q8TEB1 546 aa14.87□□□□□ -0.03
CSF3R-213ENST00000489551 COL14A1Q05707 1796 aaKnown RBP14.86□□□□□ -0.03
CSF3R-213ENST00000489551 BLMP54132 1417 aaPredicted RBP14.86□□□□□ -0.03
CSF3R-213ENST00000489551 DEFB132Q7Z7B7 95 aa14.86□□□□□ -0.03
CSF3R-213ENST00000489551 ZRANB1Q9UGI0 708 aa14.86□□□□□ -0.03
CSF3R-213ENST00000489551 HAP1P54257 671 aaPredicted RBP14.85□□□□□ -0.03
CSF3R-213ENST00000489551 ITSN1Q15811 1721 aa14.85□□□□□ -0.03
CSF3R-213ENST00000489551 WASLO00401 505 aaPredicted RBP14.84□□□□□ -0.03
CSF3R-213ENST00000489551 ATP7BP35670 1465 aa14.83□□□□□ -0.03
CSF3R-213ENST00000489551 PHRF1Q9P1Y6 1649 aaKnown RBP14.83□□□□□ -0.04
CSF3R-213ENST00000489551 TOPAZ1Q8N9V7 1692 aa14.83□□□□□ -0.04
CSF3R-213ENST00000489551 BTG4Q9NY30 223 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms