RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 DNAJC5GQ8N7S2 189 aa12.82□□□□□ -0.36
EXOSC3-206ENST00000489414 SYT17Q9BSW7 474 aa12.82□□□□□ -0.36
EXOSC3-206ENST00000489414 CASZ1Q86V15 1759 aa12.81□□□□□ -0.36
EXOSC3-206ENST00000489414 NBPF8Q3BBV2 869 aa12.81□□□□□ -0.36
EXOSC3-206ENST00000489414 NBPF14Q5TI25 921 aa12.81□□□□□ -0.36
EXOSC3-206ENST00000489414 DLC1Q96QB1 1528 aa12.81□□□□□ -0.36
EXOSC3-206ENST00000489414 PIK3R4Q99570 1358 aa12.81□□□□□ -0.36
EXOSC3-206ENST00000489414 VPS72Q15906 364 aa12.8□□□□□ -0.36
EXOSC3-206ENST00000489414 ZFYVE9O95405 1425 aa12.79□□□□□ -0.36
EXOSC3-206ENST00000489414 CCDC18Q5T9S5 1454 aa12.79□□□□□ -0.36
EXOSC3-206ENST00000489414 IDI1Q13907 227 aa12.79□□□□□ -0.36
EXOSC3-206ENST00000489414 FHDC1Q9C0D6 1143 aaPredicted RBP12.79□□□□□ -0.36
EXOSC3-206ENST00000489414 TMEM131LA2VDJ0 1609 aa12.79□□□□□ -0.36
EXOSC3-206ENST00000489414 EIF2AK4Q9P2K8 1649 aaKnown RBP12.78□□□□□ -0.36
EXOSC3-206ENST00000489414 ZNF644Q9H582 1327 aaPredicted RBP12.78□□□□□ -0.36
EXOSC3-206ENST00000489414 ADAMTS13Q76LX8 1427 aa12.78□□□□□ -0.36
EXOSC3-206ENST00000489414 RPRD2Q5VT52 1461 aaKnown RBP12.78□□□□□ -0.36
EXOSC3-206ENST00000489414 EHBP1L1Q8N3D4 1523 aa12.78□□□□□ -0.36
EXOSC3-206ENST00000489414 PTGER2P43116 358 aa12.77□□□□□ -0.37
EXOSC3-206ENST00000489414 NCBP3Q53F19 620 aaKnown RBP12.76□□□□□ -0.37
EXOSC3-206ENST00000489414 FAM182BQ5T319 152 aa12.76□□□□□ -0.37
EXOSC3-206ENST00000489414 C1orf167Q5SNV9 1468 aa12.76□□□□□ -0.37
EXOSC3-206ENST00000489414 NOS1P29475 1434 aa12.75□□□□□ -0.37
EXOSC3-206ENST00000489414 APLP1P51693 650 aa12.75□□□□□ -0.37
EXOSC3-206ENST00000489414 MTUS2Q5JR59 1369 aa12.75□□□□□ -0.37
EXOSC3-206ENST00000489414 CCDC141Q6ZP82 1450 aa12.75□□□□□ -0.37
EXOSC3-206ENST00000489414 PTPN23Q9H3S7 1636 aa12.75□□□□□ -0.37
EXOSC3-206ENST00000489414 WWC3Q9ULE0 1092 aa12.75□□□□□ -0.37
EXOSC3-206ENST00000489414 NWD2Q9ULI1 1742 aa12.74□□□□□ -0.37
EXOSC3-206ENST00000489414 PTPRUQ92729 1446 aa12.74□□□□□ -0.37
EXOSC3-206ENST00000489414 ADGRL3Q9HAR2 1447 aa12.73□□□□□ -0.37
EXOSC3-206ENST00000489414 CCNB3Q8WWL7 1395 aa12.73□□□□□ -0.37
EXOSC3-206ENST00000489414 A0A0G2JS52 829 aa12.73□□□□□ -0.37
EXOSC3-206ENST00000489414 MYT1Q01538 1121 aa12.73□□□□□ -0.37
EXOSC3-206ENST00000489414 XRN1Q8IZH2 1706 aaKnown RBP12.73□□□□□ -0.37
EXOSC3-206ENST00000489414 PLCH1Q4KWH8 1693 aa12.73□□□□□ -0.37
EXOSC3-206ENST00000489414 USP32Q8NFA0 1604 aa12.73□□□□□ -0.37
EXOSC3-206ENST00000489414 NALCNQ8IZF0 1738 aa12.72□□□□□ -0.37
EXOSC3-206ENST00000489414 APBA3O96018 575 aa12.72□□□□□ -0.37
EXOSC3-206ENST00000489414 AMOTL2Q9Y2J4 779 aa12.72□□□□□ -0.37
EXOSC3-206ENST00000489414 TNS2Q63HR2 1409 aa12.71□□□□□ -0.37
EXOSC3-206ENST00000489414 ATP10DQ9P241 1426 aa12.71□□□□□ -0.37
EXOSC3-206ENST00000489414 AATKQ6ZMQ8 1374 aa12.71□□□□□ -0.37
EXOSC3-206ENST00000489414 CROCC2H7BZ55 1655 aa12.71□□□□□ -0.37
EXOSC3-206ENST00000489414 TRIM37O94972 964 aa12.71□□□□□ -0.37
EXOSC3-206ENST00000489414 CSRNP3Q8WYN3 585 aa12.71□□□□□ -0.37
EXOSC3-206ENST00000489414 JMYQ8N9B5 988 aa12.7□□□□□ -0.38
EXOSC3-206ENST00000489414 CCDC9Q9Y3X0 531 aaKnown RBP12.7□□□□□ -0.38
EXOSC3-206ENST00000489414 MYO5BQ9ULV0 1848 aa12.69□□□□□ -0.38
EXOSC3-206ENST00000489414 FAM98CQ17RN3 349 aaKnown RBP12.69□□□□□ -0.38
EXOSC3-206ENST00000489414 RIMS2Q9UQ26 1411 aa12.69□□□□□ -0.38
EXOSC3-206ENST00000489414 MAP3K5Q99683 1374 aa12.69□□□□□ -0.38
EXOSC3-206ENST00000489414 PXDNQ92626 1479 aa12.68□□□□□ -0.38
EXOSC3-206ENST00000489414 GPR162Q16538 588 aa12.68□□□□□ -0.38
EXOSC3-206ENST00000489414 ORAI2Q96SN7 254 aa12.68□□□□□ -0.38
EXOSC3-206ENST00000489414 GPBP1L1Q9HC44 474 aaPredicted RBP12.68□□□□□ -0.38
EXOSC3-206ENST00000489414 NEXMIFQ5QGS0 1516 aa12.67□□□□□ -0.38
EXOSC3-206ENST00000489414 THSD7AQ9UPZ6 1657 aa12.67□□□□□ -0.38
EXOSC3-206ENST00000489414 ZBTB7AO95365 584 aa12.67□□□□□ -0.38
EXOSC3-206ENST00000489414 PDGFDQ9GZP0 370 aaPredicted RBP12.67□□□□□ -0.38
EXOSC3-206ENST00000489414 ADGRL2O95490 1459 aa12.65□□□□□ -0.38
EXOSC3-206ENST00000489414 WDR90Q96KV7 1748 aa12.65□□□□□ -0.38
EXOSC3-206ENST00000489414 ABCC5O15440 1437 aa12.64□□□□□ -0.39
EXOSC3-206ENST00000489414 CASKIN1Q8WXD9 1431 aa12.64□□□□□ -0.39
EXOSC3-206ENST00000489414 FAM161AQ3B820 660 aa12.64□□□□□ -0.39
EXOSC3-206ENST00000489414 SGIP1Q9BQI5 828 aa12.64□□□□□ -0.39
EXOSC3-206ENST00000489414 FYCO1Q9BQS8 1478 aa12.64□□□□□ -0.39
EXOSC3-206ENST00000489414 NRAPQ86VF7 1730 aa12.63□□□□□ -0.39
EXOSC3-206ENST00000489414 HDGFP51858 240 aaKnown RBP12.63□□□□□ -0.39
EXOSC3-206ENST00000489414 FAM196AQ6ZSG2 479 aa12.63□□□□□ -0.39
EXOSC3-206ENST00000489414 KLRG1Q96E93 195 aa12.63□□□□□ -0.39
EXOSC3-206ENST00000489414 ATF5Q9Y2D1 282 aaPredicted RBP12.63□□□□□ -0.39
EXOSC3-206ENST00000489414 NPHP3Q7Z494 1330 aa12.62□□□□□ -0.39
EXOSC3-206ENST00000489414 GCC2Q8IWJ2 1684 aa12.61□□□□□ -0.39
EXOSC3-206ENST00000489414 RSPH4AQ5TD94 716 aa12.61□□□□□ -0.39
EXOSC3-206ENST00000489414 ANO8Q9HCE9 1232 aaPredicted RBP12.61□□□□□ -0.39
EXOSC3-206ENST00000489414 NPM3O75607 178 aaKnown RBP12.6□□□□□ -0.39
EXOSC3-206ENST00000489414 SLC52A1Q9NWF4 448 aa12.6□□□□□ -0.39
EXOSC3-206ENST00000489414 ADCY9O60503 1353 aa12.59□□□□□ -0.39
EXOSC3-206ENST00000489414 RGPD3A6NKT7 1758 aaPredicted RBP12.59□□□□□ -0.39
EXOSC3-206ENST00000489414 RGPD4Q7Z3J3 1758 aa12.59□□□□□ -0.39
EXOSC3-206ENST00000489414 ARHGEF5Q12774 1597 aa12.59□□□□□ -0.39
EXOSC3-206ENST00000489414 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.57□□□□□ -0.4
EXOSC3-206ENST00000489414 KIF3CO14782 793 aa12.56□□□□□ -0.4
EXOSC3-206ENST00000489414 LMTK2Q8IWU2 1503 aa12.56□□□□□ -0.4
EXOSC3-206ENST00000489414 XPCQ01831 940 aaPredicted RBP12.55□□□□□ -0.4
EXOSC3-206ENST00000489414 ARXQ96QS3 562 aa12.55□□□□□ -0.4
EXOSC3-206ENST00000489414 MTFR1LQ9H019 292 aa12.55□□□□□ -0.4
EXOSC3-206ENST00000489414 NRXN3Q9Y4C0 1643 aa12.55□□□□□ -0.4
EXOSC3-206ENST00000489414 KIAA1210Q9ULL0 1709 aa12.54□□□□□ -0.4
EXOSC3-206ENST00000489414 ZNF526Q8TF50 670 aaPredicted RBP12.54□□□□□ -0.4
EXOSC3-206ENST00000489414 ABCA3Q99758 1704 aa12.54□□□□□ -0.4
EXOSC3-206ENST00000489414 TSPY4P0CV99 314 aa12.53□□□□□ -0.4
EXOSC3-206ENST00000489414 TSPY10P0CW01 314 aa12.53□□□□□ -0.4
EXOSC3-206ENST00000489414 PELP1Q8IZL8 1130 aaKnown RBP12.53□□□□□ -0.4
EXOSC3-206ENST00000489414 SPATA31A5Q5VU36 1347 aa12.52□□□□□ -0.41
EXOSC3-206ENST00000489414 SPATA31A7Q8IWB4 1347 aa12.52□□□□□ -0.41
EXOSC3-206ENST00000489414 DUOX2Q9NRD8 1548 aa12.52□□□□□ -0.41
EXOSC3-206ENST00000489414 SPATA31A3Q5VYP0 1347 aa12.51□□□□□ -0.41
EXOSC3-206ENST00000489414 FOXO3O43524 673 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms