RNA–Protein interactions for RNA: ENST00000489324.1

FDPS-214, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-214ENST00000489324 ATF3P18847 181 aa13.82□□□□□ -0.2
FDPS-214ENST00000489324 CENPJQ9HC77 1338 aaPredicted RBP13.81□□□□□ -0.2
FDPS-214ENST00000489324 RBM33Q96EV2 1170 aaKnown RBP13.8□□□□□ -0.2
FDPS-214ENST00000489324 PLEKHH1Q9ULM0 1364 aa13.8□□□□□ -0.2
FDPS-214ENST00000489324 UBAP1LF5GYI3 381 aa13.78□□□□□ -0.2
FDPS-214ENST00000489324 SBNO2Q9Y2G9 1366 aa13.78□□□□□ -0.2
FDPS-214ENST00000489324 CDC42BPGQ6DT37 1551 aa13.76□□□□□ -0.21
FDPS-214ENST00000489324 SAFB2Q14151 953 aaKnown RBP eCLIP13.76□□□□□ -0.21
FDPS-214ENST00000489324 FBXO41Q8TF61 875 aa13.76□□□□□ -0.21
FDPS-214ENST00000489324 SLAIN2Q9P270 581 aa13.76□□□□□ -0.21
FDPS-214ENST00000489324 ARHGEF28Q8N1W1 1705 aaKnown RBP13.76□□□□□ -0.21
FDPS-214ENST00000489324 ADGRB2O60241 1585 aa13.75□□□□□ -0.21
FDPS-214ENST00000489324 USP47Q96K76 1375 aa13.75□□□□□ -0.21
FDPS-214ENST00000489324 MINK1Q8N4C8 1332 aaPredicted RBP13.75□□□□□ -0.21
FDPS-214ENST00000489324 WASLO00401 505 aaPredicted RBP13.75□□□□□ -0.21
FDPS-214ENST00000489324 XIRP1Q702N8 1843 aaKnown RBP13.75□□□□□ -0.21
FDPS-214ENST00000489324 EIF4G2P78344 907 aaKnown RBP eCLIP13.74□□□□□ -0.21
FDPS-214ENST00000489324 PUS7Q96PZ0 661 aaKnown RBP13.74□□□□□ -0.21
FDPS-214ENST00000489324 ANKARQ7Z5J8 1434 aa13.73□□□□□ -0.21
FDPS-214ENST00000489324 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.73□□□□□ -0.21
FDPS-214ENST00000489324 EVC2Q86UK5 1308 aa13.73□□□□□ -0.21
FDPS-214ENST00000489324 MST1RQ04912 1400 aa13.73□□□□□ -0.21
FDPS-214ENST00000489324 ST20-MTHFSA0A0A6YYL1 179 aa13.72□□□□□ -0.21
FDPS-214ENST00000489324 NALCNQ8IZF0 1738 aa13.72□□□□□ -0.21
FDPS-214ENST00000489324 HIRIP3Q9BW71 556 aaPredicted RBP13.71□□□□□ -0.21
FDPS-214ENST00000489324 CDK19Q9BWU1 502 aa13.71□□□□□ -0.21
FDPS-214ENST00000489324 C1orf167Q5SNV9 1468 aa13.71□□□□□ -0.21
FDPS-214ENST00000489324 CDCA8Q53HL2 280 aa13.7□□□□□ -0.22
FDPS-214ENST00000489324 TESK2Q96S53 571 aa13.7□□□□□ -0.22
FDPS-214ENST00000489324 PIP4K2BP78356 416 aa13.69□□□□□ -0.22
FDPS-214ENST00000489324 TMF1P82094 1093 aa13.69□□□□□ -0.22
FDPS-214ENST00000489324 TULP4Q9NRJ4 1543 aa13.69□□□□□ -0.22
FDPS-214ENST00000489324 SRPK2P78362 688 aaKnown RBP13.68□□□□□ -0.22
FDPS-214ENST00000489324 BRINP3Q76B58 766 aa13.68□□□□□ -0.22
FDPS-214ENST00000489324 CCDC61Q9Y6R9 512 aa13.68□□□□□ -0.22
FDPS-214ENST00000489324 ATAD2Q6PL18 1390 aa13.68□□□□□ -0.22
FDPS-214ENST00000489324 SCAF1Q9H7N4 1312 aaKnown RBP13.67□□□□□ -0.22
FDPS-214ENST00000489324 QRICH2Q9H0J4 1663 aa13.67□□□□□ -0.22
FDPS-214ENST00000489324 HSPA5P11021 654 aaKnown RBP13.67□□□□□ -0.22
FDPS-214ENST00000489324 ESCO1Q5FWF5 840 aa13.67□□□□□ -0.22
FDPS-214ENST00000489324 NUDT16Q96DE0 195 aaKnown RBP13.67□□□□□ -0.22
FDPS-214ENST00000489324 FMN2Q9NZ56 1722 aa13.66□□□□□ -0.22
FDPS-214ENST00000489324 PLEKHG3A1L390 1219 aa13.65□□□□□ -0.22
FDPS-214ENST00000489324 PHF8Q9UPP1 1060 aa13.65□□□□□ -0.22
FDPS-214ENST00000489324 NPHP3Q7Z494 1330 aa13.64□□□□□ -0.23
FDPS-214ENST00000489324 PRR36Q9H6K5 1346 aa13.64□□□□□ -0.23
FDPS-214ENST00000489324 ATP7BP35670 1465 aa13.64□□□□□ -0.23
FDPS-214ENST00000489324 NINLQ9Y2I6 1382 aa13.64□□□□□ -0.23
FDPS-214ENST00000489324 NUTM2FA1L443 756 aa13.64□□□□□ -0.23
FDPS-214ENST00000489324 ORAI2Q96SN7 254 aa13.64□□□□□ -0.23
FDPS-214ENST00000489324 CABP2Q9NPB3 220 aa13.64□□□□□ -0.23
FDPS-214ENST00000489324 KIF1AQ12756 1690 aa13.61□□□□□ -0.23
FDPS-214ENST00000489324 ROBO1Q9Y6N7 1651 aa13.61□□□□□ -0.23
FDPS-214ENST00000489324 PSME1Q06323 249 aa13.61□□□□□ -0.23
FDPS-214ENST00000489324 SOS2Q07890 1332 aaPredicted RBP13.61□□□□□ -0.23
FDPS-214ENST00000489324 AHDC1Q5TGY3 1603 aaPredicted RBP13.61□□□□□ -0.23
FDPS-214ENST00000489324 POLR3AO14802 1390 aaPredicted RBP13.6□□□□□ -0.23
FDPS-214ENST00000489324 BRD4O60885 1362 aaPredicted RBP13.6□□□□□ -0.23
FDPS-214ENST00000489324 FOXO3O43524 673 aa13.6□□□□□ -0.23
FDPS-214ENST00000489324 PPIP5K1Q6PFW1 1433 aa13.6□□□□□ -0.23
FDPS-214ENST00000489324 NGDNQ8NEJ9 315 aaKnown RBP13.6□□□□□ -0.23
FDPS-214ENST00000489324 ZNF692Q9BU19 519 aaPredicted RBP13.6□□□□□ -0.23
FDPS-214ENST00000489324 DISP3Q9P2K9 1392 aa13.59□□□□□ -0.23
FDPS-214ENST00000489324 LRRC59Q96AG4 307 aaKnown RBP13.59□□□□□ -0.23
FDPS-214ENST00000489324 CABP1Q9NZU7 370 aa13.59□□□□□ -0.23
FDPS-214ENST00000489324 USP32Q8NFA0 1604 aa13.59□□□□□ -0.23
FDPS-214ENST00000489324 HSPA1LP34931 641 aa13.58□□□□□ -0.24
FDPS-214ENST00000489324 PMFBP1Q8TBY8 1022 aa13.58□□□□□ -0.24
FDPS-214ENST00000489324 SBNO1A3KN83 1393 aa13.58□□□□□ -0.24
FDPS-214ENST00000489324 ITSN1Q15811 1721 aa13.57□□□□□ -0.24
FDPS-214ENST00000489324 KRT28Q7Z3Y7 464 aa13.57□□□□□ -0.24
FDPS-214ENST00000489324 TERF2IPQ9NYB0 399 aa13.57□□□□□ -0.24
FDPS-214ENST00000489324 ACEP12821 1306 aa13.57□□□□□ -0.24
FDPS-214ENST00000489324 HDGFL2Q7Z4V5 671 aaPredicted RBP13.56□□□□□ -0.24
FDPS-214ENST00000489324 ILDR1Q86SU0 546 aaPredicted RBP13.56□□□□□ -0.24
FDPS-214ENST00000489324 TMC1Q8TDI8 760 aa13.56□□□□□ -0.24
FDPS-214ENST00000489324 NHSL1Q5SYE7 1610 aa13.56□□□□□ -0.24
FDPS-214ENST00000489324 TOPAZ1Q8N9V7 1692 aa13.56□□□□□ -0.24
FDPS-214ENST00000489324 JCADQ9P266 1359 aa13.55□□□□□ -0.24
FDPS-214ENST00000489324 PXDNQ92626 1479 aa13.55□□□□□ -0.24
FDPS-214ENST00000489324 SLC12A5Q9H2X9 1139 aa13.54□□□□□ -0.24
FDPS-214ENST00000489324 CPSF1Q10570 1443 aaKnown RBP13.54□□□□□ -0.24
FDPS-214ENST00000489324 DDX17Q92841 729 aaKnown RBP13.53□□□□□ -0.24
FDPS-214ENST00000489324 SPATA31A3Q5VYP0 1347 aa13.53□□□□□ -0.24
FDPS-214ENST00000489324 ARHGEF10O15013 1369 aa13.53□□□□□ -0.24
FDPS-214ENST00000489324 ANKRD36BQ8N2N9 1353 aa13.53□□□□□ -0.24
FDPS-214ENST00000489324 USP6P35125 1406 aa13.52□□□□□ -0.25
FDPS-214ENST00000489324 COL16A1Q07092 1604 aaPredicted RBP13.52□□□□□ -0.25
FDPS-214ENST00000489324 PHLPP1O60346 1717 aa13.52□□□□□ -0.25
FDPS-214ENST00000489324 RGPD8O14715 1765 aaPredicted RBP13.51□□□□□ -0.25
FDPS-214ENST00000489324 TNS3Q68CZ2 1445 aa13.51□□□□□ -0.25
FDPS-214ENST00000489324 KTN1Q86UP2 1357 aaKnown RBP13.51□□□□□ -0.25
FDPS-214ENST00000489324 KIF7Q2M1P5 1343 aa13.51□□□□□ -0.25
FDPS-214ENST00000489324 SPATA31A6Q5VVP1 1343 aa13.51□□□□□ -0.25
FDPS-214ENST00000489324 TTC21AQ8NDW8 1320 aa13.51□□□□□ -0.25
FDPS-214ENST00000489324 SSH2Q76I76 1423 aa13.5□□□□□ -0.25
FDPS-214ENST00000489324 C11orf95C9JLR9 678 aaPredicted RBP13.5□□□□□ -0.25
FDPS-214ENST00000489324 XPCQ01831 940 aaPredicted RBP13.5□□□□□ -0.25
FDPS-214ENST00000489324 CD163L1Q9NR16 1453 aa13.49□□□□□ -0.25
FDPS-214ENST00000489324 A0A1W2PP64 1363 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms