RNA–Protein interactions for RNA: ENST00000489206.1

SYNGR1-207, Transcript of synaptogyrin 1, humanhuman

TSL 2

Gene SYNGR1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-207ENST00000489206 NKTRP30414 1462 aaKnown RBP25.7■■□□□ 1.7
SYNGR1-207ENST00000489206 MYO5BQ9ULV0 1848 aa25.69■■□□□ 1.7
SYNGR1-207ENST00000489206 TULP4Q9NRJ4 1543 aa25.68■■□□□ 1.7
SYNGR1-207ENST00000489206 SLC52A1Q9NWF4 448 aa25.67■■□□□ 1.7
SYNGR1-207ENST00000489206 NSD2O96028 1365 aa25.66■■□□□ 1.7
SYNGR1-207ENST00000489206 EVC2Q86UK5 1308 aa25.66■■□□□ 1.7
SYNGR1-207ENST00000489206 E9PSI1 815 aa25.66■■□□□ 1.7
SYNGR1-207ENST00000489206 APAF1O14727 1248 aa25.66■■□□□ 1.7
SYNGR1-207ENST00000489206 CCDC146Q8IYE0 955 aa25.66■■□□□ 1.7
SYNGR1-207ENST00000489206 TMEM131LA2VDJ0 1609 aa25.66■■□□□ 1.7
SYNGR1-207ENST00000489206 TMEM132EQ6IEE7 984 aa25.65■■□□□ 1.7
SYNGR1-207ENST00000489206 MORC1Q86VD1 984 aa25.65■■□□□ 1.7
SYNGR1-207ENST00000489206 NOP58Q9Y2X3 529 aaKnown RBP25.65■■□□□ 1.7
SYNGR1-207ENST00000489206 YEATS2Q9ULM3 1422 aa25.64■■□□□ 1.7
SYNGR1-207ENST00000489206 ANKRD36BQ8N2N9 1353 aa25.63■■□□□ 1.69
SYNGR1-207ENST00000489206 CGNL1Q0VF96 1302 aa25.63■■□□□ 1.69
SYNGR1-207ENST00000489206 SLC12A5Q9H2X9 1139 aa25.62■■□□□ 1.69
SYNGR1-207ENST00000489206 NINLQ9Y2I6 1382 aa25.62■■□□□ 1.69
SYNGR1-207ENST00000489206 IPO9Q96P70 1041 aaKnown RBP25.62■■□□□ 1.69
SYNGR1-207ENST00000489206 REREQ9P2R6 1566 aa25.6■■□□□ 1.69
SYNGR1-207ENST00000489206 C20orf194Q5TEA3 1177 aa25.6■■□□□ 1.69
SYNGR1-207ENST00000489206 CLTCQ00610 1675 aaKnown RBP25.59■■□□□ 1.69
SYNGR1-207ENST00000489206 IDI1Q13907 227 aa25.59■■□□□ 1.69
SYNGR1-207ENST00000489206 IQSEC2Q5JU85 1478 aa25.59■■□□□ 1.69
SYNGR1-207ENST00000489206 KDM2BQ8NHM5 1336 aa25.58■■□□□ 1.69
SYNGR1-207ENST00000489206 PDE4AP27815 886 aa25.57■■□□□ 1.68
SYNGR1-207ENST00000489206 CENPQQ7L2Z9 268 aaPredicted RBP25.56■■□□□ 1.68
SYNGR1-207ENST00000489206 BACH2Q9BYV9 841 aa25.56■■□□□ 1.68
SYNGR1-207ENST00000489206 ANKRD26Q9UPS8 1709 aa25.56■■□□□ 1.68
SYNGR1-207ENST00000489206 CFAP53Q96M91 514 aa25.55■■□□□ 1.68
SYNGR1-207ENST00000489206 NCBP3Q53F19 620 aaKnown RBP25.54■■□□□ 1.68
SYNGR1-207ENST00000489206 RUNDC1Q96C34 613 aa25.54■■□□□ 1.68
SYNGR1-207ENST00000489206 SPINK5Q9NQ38 1064 aaPredicted RBP25.54■■□□□ 1.68
SYNGR1-207ENST00000489206 PTPRMP28827 1452 aa25.52■■□□□ 1.68
SYNGR1-207ENST00000489206 AGLP35573 1532 aa25.52■■□□□ 1.68
SYNGR1-207ENST00000489206 WWC1Q8IX03 1113 aa25.51■■□□□ 1.67
SYNGR1-207ENST00000489206 NUTM2DQ5VT03 806 aaPredicted RBP25.5■■□□□ 1.67
SYNGR1-207ENST00000489206 ATAD2Q6PL18 1390 aa25.49■■□□□ 1.67
SYNGR1-207ENST00000489206 ABCC11Q96J66 1382 aa25.49■■□□□ 1.67
SYNGR1-207ENST00000489206 ZBTB47Q9UFB7 747 aaPredicted RBP25.49■■□□□ 1.67
SYNGR1-207ENST00000489206 PHF23Q9BUL5 403 aaPredicted RBP25.48■■□□□ 1.67
SYNGR1-207ENST00000489206 ADGRB2O60241 1585 aa25.48■■□□□ 1.67
SYNGR1-207ENST00000489206 MTHFSP49914 203 aa25.47■■□□□ 1.67
SYNGR1-207ENST00000489206 PPP6R1Q9UPN7 881 aa25.47■■□□□ 1.67
SYNGR1-207ENST00000489206 MED14O60244 1454 aa25.47■■□□□ 1.67
SYNGR1-207ENST00000489206 CCDC27Q2M243 656 aa25.47■■□□□ 1.67
SYNGR1-207ENST00000489206 YTHDC2Q9H6S0 1430 aaKnown RBP25.47■■□□□ 1.67
SYNGR1-207ENST00000489206 ALKQ9UM73 1620 aa25.46■■□□□ 1.67
SYNGR1-207ENST00000489206 PAK3O75914 559 aaPredicted RBP25.45■■□□□ 1.67
SYNGR1-207ENST00000489206 WDR63Q8IWG1 891 aa25.45■■□□□ 1.67
SYNGR1-207ENST00000489206 TNNT2P45379 298 aaPredicted RBP25.45■■□□□ 1.66
SYNGR1-207ENST00000489206 PDE3AQ14432 1141 aa25.45■■□□□ 1.66
SYNGR1-207ENST00000489206 DMRT2Q9Y5R5 561 aa25.45■■□□□ 1.66
SYNGR1-207ENST00000489206 CABP2Q9NPB3 220 aa25.44■■□□□ 1.66
SYNGR1-207ENST00000489206 A0A1W2PP64 1363 aa25.44■■□□□ 1.66
SYNGR1-207ENST00000489206 TCP11L2Q8N4U5 519 aa25.43■■□□□ 1.66
SYNGR1-207ENST00000489206 BCAR3O75815 825 aa25.42■■□□□ 1.66
SYNGR1-207ENST00000489206 SPATA31D1Q6ZQQ2 1576 aa25.41■■□□□ 1.66
SYNGR1-207ENST00000489206 KIF20BQ96Q89 1820 aa25.41■■□□□ 1.66
SYNGR1-207ENST00000489206 DLC1Q96QB1 1528 aa25.41■■□□□ 1.66
SYNGR1-207ENST00000489206 SRPK2P78362 688 aaKnown RBP25.39■■□□□ 1.66
SYNGR1-207ENST00000489206 TERF2IPQ9NYB0 399 aa25.38■■□□□ 1.65
SYNGR1-207ENST00000489206 STK26Q9P289 416 aa25.38■■□□□ 1.65
SYNGR1-207ENST00000489206 SETD1AO15047 1707 aaKnown RBP25.38■■□□□ 1.65
SYNGR1-207ENST00000489206 COL3A1P02461 1466 aaPredicted RBP25.37■■□□□ 1.65
SYNGR1-207ENST00000489206 CD163L1Q9NR16 1453 aa25.37■■□□□ 1.65
SYNGR1-207ENST00000489206 AAMPQ13685 434 aa25.36■■□□□ 1.65
SYNGR1-207ENST00000489206 VIRMAQ69YN4 1812 aaKnown RBP25.36■■□□□ 1.65
SYNGR1-207ENST00000489206 SAFB2Q14151 953 aaKnown RBP eCLIP25.35■■□□□ 1.65
SYNGR1-207ENST00000489206 ARHGEF40Q8TER5 1519 aa25.35■■□□□ 1.65
SYNGR1-207ENST00000489206 PRAM1Q96QH2 718 aa25.35■■□□□ 1.65
SYNGR1-207ENST00000489206 NLRP1Q9C000 1473 aa25.35■■□□□ 1.65
SYNGR1-207ENST00000489206 POGKQ9P215 609 aa25.35■■□□□ 1.65
SYNGR1-207ENST00000489206 NPM2Q86SE8 214 aaKnown RBP25.35■■□□□ 1.65
SYNGR1-207ENST00000489206 FBXO31Q5XUX0 539 aaPredicted RBP25.33■■□□□ 1.65
SYNGR1-207ENST00000489206 A2ML1A8K2U0 1454 aa25.33■■□□□ 1.65
SYNGR1-207ENST00000489206 MYH16Q9H6N6 1097 aa25.33■■□□□ 1.64
SYNGR1-207ENST00000489206 CANXP27824 592 aaKnown RBP25.32■■□□□ 1.64
SYNGR1-207ENST00000489206 NEUROD2Q15784 382 aa25.32■■□□□ 1.64
SYNGR1-207ENST00000489206 DDRGK1Q96HY6 314 aa25.32■■□□□ 1.64
SYNGR1-207ENST00000489206 RRP7AQ9Y3A4 280 aaKnown RBP25.32■■□□□ 1.64
SYNGR1-207ENST00000489206 MINK1Q8N4C8 1332 aaPredicted RBP25.31■■□□□ 1.64
SYNGR1-207ENST00000489206 U2AF1L5P0DN76 240 aaPredicted RBP25.31■■□□□ 1.64
SYNGR1-207ENST00000489206 RARSP54136 660 aaKnown RBP25.31■■□□□ 1.64
SYNGR1-207ENST00000489206 U2AF1Q01081 240 aaKnown RBP eCLIP25.31■■□□□ 1.64
SYNGR1-207ENST00000489206 FAM161AQ3B820 660 aa25.31■■□□□ 1.64
SYNGR1-207ENST00000489206 HDGFL2Q7Z4V5 671 aaPredicted RBP25.3■■□□□ 1.64
SYNGR1-207ENST00000489206 SKAP1Q86WV1 359 aa25.3■■□□□ 1.64
SYNGR1-207ENST00000489206 STAG3Q9UJ98 1225 aa25.3■■□□□ 1.64
SYNGR1-207ENST00000489206 CLUAP1Q96AJ1 413 aa25.29■■□□□ 1.64
SYNGR1-207ENST00000489206 ATP7BP35670 1465 aa25.28■■□□□ 1.64
SYNGR1-207ENST00000489206 CT47B1P0C2W7 299 aaPredicted RBP25.28■■□□□ 1.64
SYNGR1-207ENST00000489206 CDC42BPGQ6DT37 1551 aa25.27■■□□□ 1.64
SYNGR1-207ENST00000489206 RIMS2Q9UQ26 1411 aa25.27■■□□□ 1.64
SYNGR1-207ENST00000489206 FYB1O15117 783 aa25.27■■□□□ 1.64
SYNGR1-207ENST00000489206 GGNBP2Q9H3C7 697 aa25.25■■□□□ 1.63
SYNGR1-207ENST00000489206 CDK19Q9BWU1 502 aa25.25■■□□□ 1.63
SYNGR1-207ENST00000489206 PNPLA6Q8IY17 1366 aa25.24■■□□□ 1.63
SYNGR1-207ENST00000489206 KNDC1Q76NI1 1749 aa25.24■■□□□ 1.63
SYNGR1-207ENST00000489206 PLEKHF1Q96S99 279 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms