RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 POTEBQ6S5H4 581 aa13.29□□□□□ -0.28
TRAPPC12-221ENST00000489032 SLC4A3P48751 1232 aa13.28□□□□□ -0.28
TRAPPC12-221ENST00000489032 SULF1Q8IWU6 871 aa13.28□□□□□ -0.28
TRAPPC12-221ENST00000489032 TMUB1Q9BVT8 246 aa13.28□□□□□ -0.28
TRAPPC12-221ENST00000489032 TTBK1Q5TCY1 1321 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC12-221ENST00000489032 TK2O00142 265 aa13.27□□□□□ -0.29
TRAPPC12-221ENST00000489032 MS4A1P11836 297 aa13.27□□□□□ -0.29
TRAPPC12-221ENST00000489032 FAM217BQ9NTX9 383 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC12-221ENST00000489032 SEPT9Q9UHD8 586 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC12-221ENST00000489032 MAP3K4Q9Y6R4 1608 aa13.27□□□□□ -0.29
TRAPPC12-221ENST00000489032 C3orf80F5H4A9 247 aa13.26□□□□□ -0.29
TRAPPC12-221ENST00000489032 LSM11P83369 360 aaKnown RBP eCLIP13.26□□□□□ -0.29
TRAPPC12-221ENST00000489032 CUL7Q14999 1698 aa13.26□□□□□ -0.29
TRAPPC12-221ENST00000489032 RSPH4AQ5TD94 716 aa13.26□□□□□ -0.29
TRAPPC12-221ENST00000489032 SOCS7O14512 581 aa13.25□□□□□ -0.29
TRAPPC12-221ENST00000489032 TMEM134Q9H6X4 195 aa13.25□□□□□ -0.29
TRAPPC12-221ENST00000489032 FAM98CQ17RN3 349 aaKnown RBP13.24□□□□□ -0.29
TRAPPC12-221ENST00000489032 ANKRD13DQ6ZTN6 518 aa13.24□□□□□ -0.29
TRAPPC12-221ENST00000489032 BEGAINQ9BUH8 593 aa13.24□□□□□ -0.29
TRAPPC12-221ENST00000489032 EPRSP07814 1512 aaKnown RBP13.23□□□□□ -0.29
TRAPPC12-221ENST00000489032 DDX11L8A8MPP1 907 aa13.23□□□□□ -0.29
TRAPPC12-221ENST00000489032 LAPTM4BQ86VI4 370 aa13.23□□□□□ -0.29
TRAPPC12-221ENST00000489032 MRPL50Q8N5N7 158 aaKnown RBP13.23□□□□□ -0.29
TRAPPC12-221ENST00000489032 TNIKQ9UKE5 1360 aa13.22□□□□□ -0.29
TRAPPC12-221ENST00000489032 ADGRD1Q6QNK2 874 aa13.22□□□□□ -0.29
TRAPPC12-221ENST00000489032 ATP1B4Q9UN42 357 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC12-221ENST00000489032 GTF3C3Q9Y5Q9 886 aa13.22□□□□□ -0.29
TRAPPC12-221ENST00000489032 IGF1RP08069 1367 aa13.21□□□□□ -0.29
TRAPPC12-221ENST00000489032 UHRF1BP1LA0JNW5 1464 aa13.21□□□□□ -0.3
TRAPPC12-221ENST00000489032 CARMIL2Q6F5E8 1435 aa13.21□□□□□ -0.3
TRAPPC12-221ENST00000489032 GOLGA8CPA6NN73 597 aa13.2□□□□□ -0.3
TRAPPC12-221ENST00000489032 RDH13Q8NBN7 331 aa13.2□□□□□ -0.3
TRAPPC12-221ENST00000489032 RSPH6AQ9H0K4 717 aa13.2□□□□□ -0.3
TRAPPC12-221ENST00000489032 PLEKHG3A1L390 1219 aa13.18□□□□□ -0.3
TRAPPC12-221ENST00000489032 DIXDC1Q155Q3 683 aa13.18□□□□□ -0.3
TRAPPC12-221ENST00000489032 SWT1Q5T5J6 900 aaKnown RBP13.18□□□□□ -0.3
TRAPPC12-221ENST00000489032 ILDR2Q71H61 639 aa13.18□□□□□ -0.3
TRAPPC12-221ENST00000489032 CARMIL1Q5VZK9 1371 aa13.18□□□□□ -0.3
TRAPPC12-221ENST00000489032 DISP3Q9P2K9 1392 aa13.18□□□□□ -0.3
TRAPPC12-221ENST00000489032 EEA1Q15075 1411 aa13.17□□□□□ -0.3
TRAPPC12-221ENST00000489032 UACAQ9BZF9 1416 aa13.17□□□□□ -0.3
TRAPPC12-221ENST00000489032 KIF21BO75037 1637 aa13.17□□□□□ -0.3
TRAPPC12-221ENST00000489032 BHMG1C9JSJ3 638 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC12-221ENST00000489032 RNF40O75150 1001 aa13.16□□□□□ -0.3
TRAPPC12-221ENST00000489032 SLF2Q8IX21 1173 aa13.16□□□□□ -0.3
TRAPPC12-221ENST00000489032 KDM5BQ9UGL1 1544 aa13.15□□□□□ -0.3
TRAPPC12-221ENST00000489032 NUTM1Q86Y26 1132 aa13.15□□□□□ -0.3
TRAPPC12-221ENST00000489032 CD46P15529 392 aa13.14□□□□□ -0.31
TRAPPC12-221ENST00000489032 SAMD7Q7Z3H4 446 aa13.14□□□□□ -0.31
TRAPPC12-221ENST00000489032 ZFRQ96KR1 1074 aaKnown RBP13.14□□□□□ -0.31
TRAPPC12-221ENST00000489032 PCMTD1Q96MG8 357 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC12-221ENST00000489032 PTPRMP28827 1452 aa13.14□□□□□ -0.31
TRAPPC12-221ENST00000489032 GOPCQ9HD26 462 aa13.13□□□□□ -0.31
TRAPPC12-221ENST00000489032 ZCCHC11Q5TAX3 1644 aaKnown RBP13.13□□□□□ -0.31
TRAPPC12-221ENST00000489032 PCF11O94913 1555 aaKnown RBP13.12□□□□□ -0.31
TRAPPC12-221ENST00000489032 FAM9AQ8IZU1 332 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC12-221ENST00000489032 NECTIN2Q92692 538 aa13.11□□□□□ -0.31
TRAPPC12-221ENST00000489032 LRCH3Q96II8 777 aa13.11□□□□□ -0.31
TRAPPC12-221ENST00000489032 RAPGEF2Q9Y4G8 1499 aa13.1□□□□□ -0.31
TRAPPC12-221ENST00000489032 MAGI3Q5TCQ9 1506 aa13.1□□□□□ -0.31
TRAPPC12-221ENST00000489032 HRO43593 1189 aa13.1□□□□□ -0.31
TRAPPC12-221ENST00000489032 SH3D19Q5HYK7 790 aa13.1□□□□□ -0.31
TRAPPC12-221ENST00000489032 WDR7Q9Y4E6 1490 aa13.1□□□□□ -0.31
TRAPPC12-221ENST00000489032 ADAMTSL3P82987 1691 aa13.09□□□□□ -0.31
TRAPPC12-221ENST00000489032 CD109Q6YHK3 1445 aa13.09□□□□□ -0.31
TRAPPC12-221ENST00000489032 ANKK1Q8NFD2 765 aa13.09□□□□□ -0.31
TRAPPC12-221ENST00000489032 TBC1D2Q9BYX2 928 aa13.09□□□□□ -0.31
TRAPPC12-221ENST00000489032 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC12-221ENST00000489032 IQGAP2Q13576 1575 aa13.08□□□□□ -0.32
TRAPPC12-221ENST00000489032 SKIV2LQ15477 1246 aaKnown RBP13.08□□□□□ -0.32
TRAPPC12-221ENST00000489032 POTEGQ6S5H5 508 aa13.08□□□□□ -0.32
TRAPPC12-221ENST00000489032 CFAP43Q8NDM7 1665 aa13.08□□□□□ -0.32
TRAPPC12-221ENST00000489032 POTEMA6NI47 508 aa13.06□□□□□ -0.32
TRAPPC12-221ENST00000489032 POLR3EQ9NVU0 708 aa13.06□□□□□ -0.32
TRAPPC12-221ENST00000489032 PRXQ9BXM0 1461 aa13.05□□□□□ -0.32
TRAPPC12-221ENST00000489032 KDM4AO75164 1064 aa13.05□□□□□ -0.32
TRAPPC12-221ENST00000489032 CDAN1Q8IWY9 1227 aa13.05□□□□□ -0.32
TRAPPC12-221ENST00000489032 SPIRE2Q8WWL2 714 aa13.05□□□□□ -0.32
TRAPPC12-221ENST00000489032 DISP1Q96F81 1524 aa13.04□□□□□ -0.32
TRAPPC12-221ENST00000489032 GCGRP47871 477 aa13.04□□□□□ -0.32
TRAPPC12-221ENST00000489032 MYSM1Q5VVJ2 828 aa13.04□□□□□ -0.32
TRAPPC12-221ENST00000489032 ERICH6Q7L0X2 663 aa13.04□□□□□ -0.32
TRAPPC12-221ENST00000489032 WNT2BQ93097 391 aa13.04□□□□□ -0.32
TRAPPC12-221ENST00000489032 SLC10A3P09131 477 aa13.03□□□□□ -0.32
TRAPPC12-221ENST00000489032 KMT5BQ4FZB7 885 aa13.03□□□□□ -0.32
TRAPPC12-221ENST00000489032 GRIPAP1Q4V328 841 aa13.03□□□□□ -0.32
TRAPPC12-221ENST00000489032 KRTAP3-3Q9BYR6 98 aa13.03□□□□□ -0.32
TRAPPC12-221ENST00000489032 KRTAP3-2Q9BYR7 98 aa13.03□□□□□ -0.32
TRAPPC12-221ENST00000489032 ARAP3Q8WWN8 1544 aa13.03□□□□□ -0.32
TRAPPC12-221ENST00000489032 CLK2P49760 499 aaKnown RBP13.02□□□□□ -0.33
TRAPPC12-221ENST00000489032 USP46P62068 366 aa13.02□□□□□ -0.33
TRAPPC12-221ENST00000489032 CFHP08603 1231 aa13.01□□□□□ -0.33
TRAPPC12-221ENST00000489032 PPP4CP60510 307 aa13.01□□□□□ -0.33
TRAPPC12-221ENST00000489032 SPATA31D1Q6ZQQ2 1576 aa13.01□□□□□ -0.33
TRAPPC12-221ENST00000489032 MADDQ8WXG6 1647 aa13.01□□□□□ -0.33
TRAPPC12-221ENST00000489032 BCORL1Q5H9F3 1711 aa13.01□□□□□ -0.33
TRAPPC12-221ENST00000489032 HSPA2P54652 639 aa13□□□□□ -0.33
TRAPPC12-221ENST00000489032 RIC3Q7Z5B4 369 aa13□□□□□ -0.33
TRAPPC12-221ENST00000489032 PRR14Q9BWN1 585 aa13□□□□□ -0.33
TRAPPC12-221ENST00000489032 ARID4BQ4LE39 1312 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms