RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 KHSRPQ92945 711 aaKnown RBP eCLIP9.16□□□□□ -0.94
HDLBP-243ENST00000488923 RNF25Q96BH1 459 aaPredicted RBP9.16□□□□□ -0.94
HDLBP-243ENST00000488923 HIRIP3Q9BW71 556 aaPredicted RBP9.16□□□□□ -0.94
HDLBP-243ENST00000488923 PLA2G2EQ9NZK7 142 aa9.16□□□□□ -0.94
HDLBP-243ENST00000488923 HCSTQ9UBK5 93 aa9.16□□□□□ -0.94
HDLBP-243ENST00000488923 PHF8Q9UPP1 1060 aa9.16□□□□□ -0.94
HDLBP-243ENST00000488923 DHX29Q7Z478 1369 aaKnown RBP9.15□□□□□ -0.94
HDLBP-243ENST00000488923 CD109Q6YHK3 1445 aa9.14□□□□□ -0.95
HDLBP-243ENST00000488923 DEPDC5O75140 1603 aa9.14□□□□□ -0.95
HDLBP-243ENST00000488923 MYT1Q01538 1121 aa9.14□□□□□ -0.95
HDLBP-243ENST00000488923 AFAP1Q8N556 730 aa9.14□□□□□ -0.95
HDLBP-243ENST00000488923 CARD11Q9BXL7 1154 aa9.14□□□□□ -0.95
HDLBP-243ENST00000488923 NEO1Q92859 1461 aa9.14□□□□□ -0.95
HDLBP-243ENST00000488923 NEURL4Q96JN8 1562 aa9.13□□□□□ -0.95
HDLBP-243ENST00000488923 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.13□□□□□ -0.95
HDLBP-243ENST00000488923 DCAF11Q8TEB1 546 aa9.13□□□□□ -0.95
HDLBP-243ENST00000488923 ZFP91Q96JP5 570 aaPredicted RBP9.13□□□□□ -0.95
HDLBP-243ENST00000488923 POLR1AO95602 1720 aaPredicted RBP9.13□□□□□ -0.95
HDLBP-243ENST00000488923 MLH3Q9UHC1 1453 aa9.13□□□□□ -0.95
HDLBP-243ENST00000488923 PTPRTO14522 1441 aa9.13□□□□□ -0.95
HDLBP-243ENST00000488923 PRAG1Q86YV5 1406 aa9.13□□□□□ -0.95
HDLBP-243ENST00000488923 LAMC1P11047 1609 aa9.13□□□□□ -0.95
HDLBP-243ENST00000488923 GPRASP1Q5JY77 1395 aa9.12□□□□□ -0.95
HDLBP-243ENST00000488923 KDM5CP41229 1560 aa9.12□□□□□ -0.95
HDLBP-243ENST00000488923 KIF7Q2M1P5 1343 aa9.12□□□□□ -0.95
HDLBP-243ENST00000488923 PRDM15P57071 1507 aaPredicted RBP9.12□□□□□ -0.95
HDLBP-243ENST00000488923 ZNF326Q5BKZ1 582 aaKnown RBP9.12□□□□□ -0.95
HDLBP-243ENST00000488923 PLA2R1Q13018 1463 aa9.12□□□□□ -0.95
HDLBP-243ENST00000488923 VWDEQ8N2E2 1590 aa9.12□□□□□ -0.95
HDLBP-243ENST00000488923 KTN1Q86UP2 1357 aaKnown RBP9.12□□□□□ -0.95
HDLBP-243ENST00000488923 TRPM2O94759 1503 aa9.11□□□□□ -0.95
HDLBP-243ENST00000488923 POGZQ7Z3K3 1410 aa9.11□□□□□ -0.95
HDLBP-243ENST00000488923 LMTK2Q8IWU2 1503 aa9.1□□□□□ -0.95
HDLBP-243ENST00000488923 TET3O43151 1660 aa9.1□□□□□ -0.95
HDLBP-243ENST00000488923 RIOK3O14730 519 aaKnown RBP9.1□□□□□ -0.95
HDLBP-243ENST00000488923 A2MP01023 1474 aa9.09□□□□□ -0.95
HDLBP-243ENST00000488923 KIF3BO15066 747 aa9.09□□□□□ -0.95
HDLBP-243ENST00000488923 DAXXQ9UER7 740 aaPredicted RBP9.09□□□□□ -0.95
HDLBP-243ENST00000488923 PRKRIP1Q9H875 184 aaPredicted RBP9.08□□□□□ -0.96
HDLBP-243ENST00000488923 KDM2AQ9Y2K7 1162 aa9.08□□□□□ -0.96
HDLBP-243ENST00000488923 GLI2P10070 1586 aa9.07□□□□□ -0.96
HDLBP-243ENST00000488923 HECW2Q9P2P5 1572 aa9.07□□□□□ -0.96
HDLBP-243ENST00000488923 TRPM1Q7Z4N2 1603 aa9.07□□□□□ -0.96
HDLBP-243ENST00000488923 C11orf95C9JLR9 678 aaPredicted RBP9.07□□□□□ -0.96
HDLBP-243ENST00000488923 RNF17Q9BXT8 1623 aaKnown RBP9.06□□□□□ -0.96
HDLBP-243ENST00000488923 VGFO15240 615 aaPredicted RBP9.06□□□□□ -0.96
HDLBP-243ENST00000488923 RGL3Q3MIN7 710 aa9.06□□□□□ -0.96
HDLBP-243ENST00000488923 POTEEQ6S8J3 1075 aa9.06□□□□□ -0.96
HDLBP-243ENST00000488923 E9PCH4 1651 aa9.06□□□□□ -0.96
HDLBP-243ENST00000488923 WASHC2CQ9Y4E1 1318 aa9.05□□□□□ -0.96
HDLBP-243ENST00000488923 SPHKAPQ2M3C7 1700 aa9.05□□□□□ -0.96
HDLBP-243ENST00000488923 BCORL1Q5H9F3 1711 aa9.05□□□□□ -0.96
HDLBP-243ENST00000488923 KIDINS220Q9ULH0 1771 aa9.05□□□□□ -0.96
HDLBP-243ENST00000488923 ST20-MTHFSA0A0A6YYL1 179 aa9.05□□□□□ -0.96
HDLBP-243ENST00000488923 CDCA8Q53HL2 280 aa9.05□□□□□ -0.96
HDLBP-243ENST00000488923 FBXO22Q8NEZ5 403 aa9.05□□□□□ -0.96
HDLBP-243ENST00000488923 EFCAB6Q5THR3 1501 aa9.05□□□□□ -0.96
HDLBP-243ENST00000488923 EIF3AQ14152 1382 aaKnown RBP9.04□□□□□ -0.96
HDLBP-243ENST00000488923 MROH1Q8NDA8 1641 aa9.04□□□□□ -0.96
HDLBP-243ENST00000488923 MYOM2P54296 1465 aa9.03□□□□□ -0.96
HDLBP-243ENST00000488923 CEP152O94986 1710 aa9.03□□□□□ -0.96
HDLBP-243ENST00000488923 KIF3CO14782 793 aa9.03□□□□□ -0.96
HDLBP-243ENST00000488923 TMF1P82094 1093 aa9.03□□□□□ -0.96
HDLBP-243ENST00000488923 RALBP1Q15311 655 aa9.03□□□□□ -0.96
HDLBP-243ENST00000488923 MAP3K4Q9Y6R4 1608 aa9.02□□□□□ -0.96
HDLBP-243ENST00000488923 NEFLP07196 543 aa9.02□□□□□ -0.97
HDLBP-243ENST00000488923 NUDT7P0C024 238 aa9.02□□□□□ -0.97
HDLBP-243ENST00000488923 MRS2Q9HD23 443 aa9.02□□□□□ -0.97
HDLBP-243ENST00000488923 RPGRIP1LQ68CZ1 1315 aa9.02□□□□□ -0.97
HDLBP-243ENST00000488923 COL17A1Q9UMD9 1497 aaPredicted RBP9.02□□□□□ -0.97
HDLBP-243ENST00000488923 NLRP6P59044 892 aa9.01□□□□□ -0.97
HDLBP-243ENST00000488923 KIAA1210Q9ULL0 1709 aa9.01□□□□□ -0.97
HDLBP-243ENST00000488923 AXIN2Q9Y2T1 843 aa9.01□□□□□ -0.97
HDLBP-243ENST00000488923 CLTCL1P53675 1640 aa9.01□□□□□ -0.97
HDLBP-243ENST00000488923 SCAF11Q99590 1463 aaKnown RBP9.01□□□□□ -0.97
HDLBP-243ENST00000488923 ARHGAP31Q2M1Z3 1444 aa9□□□□□ -0.97
HDLBP-243ENST00000488923 HNRNPUQ00839 825 aaKnown RBP eCLIP9□□□□□ -0.97
HDLBP-243ENST00000488923 POLR3GLQ9BT43 218 aa9□□□□□ -0.97
HDLBP-243ENST00000488923 MADDQ8WXG6 1647 aa9□□□□□ -0.97
HDLBP-243ENST00000488923 PSDA5PKW4 1024 aaPredicted RBP8.99□□□□□ -0.97
HDLBP-243ENST00000488923 C2orf72A6NCS6 295 aa8.99□□□□□ -0.97
HDLBP-243ENST00000488923 NBPF1Q3BBV0 1214 aa8.99□□□□□ -0.97
HDLBP-243ENST00000488923 CYB5RLQ6IPT4 315 aa8.99□□□□□ -0.97
HDLBP-243ENST00000488923 LHX6Q9UPM6 363 aa8.99□□□□□ -0.97
HDLBP-243ENST00000488923 ZC3H13Q5T200 1668 aaKnown RBP8.99□□□□□ -0.97
HDLBP-243ENST00000488923 ZMYM4Q5VZL5 1548 aa8.99□□□□□ -0.97
HDLBP-243ENST00000488923 FRMPD1Q5SYB0 1578 aa8.99□□□□□ -0.97
HDLBP-243ENST00000488923 BRD4O60885 1362 aaPredicted RBP8.99□□□□□ -0.97
HDLBP-243ENST00000488923 ARHGAP33O14559 1287 aa8.98□□□□□ -0.97
HDLBP-243ENST00000488923 SLC34A2O95436 690 aa8.98□□□□□ -0.97
HDLBP-243ENST00000488923 ADGRD1Q6QNK2 874 aa8.98□□□□□ -0.97
HDLBP-243ENST00000488923 TESK2Q96S53 571 aa8.98□□□□□ -0.97
HDLBP-243ENST00000488923 ZBED9Q6R2W3 1325 aa8.98□□□□□ -0.97
HDLBP-243ENST00000488923 MYBBP1AQ9BQG0 1328 aaKnown RBP8.98□□□□□ -0.97
HDLBP-243ENST00000488923 DIP2CQ9Y2E4 1556 aa8.98□□□□□ -0.97
HDLBP-243ENST00000488923 RIMBP3CA6NJZ7 1639 aa8.98□□□□□ -0.97
HDLBP-243ENST00000488923 RIMBP3BA6NNM3 1639 aa8.98□□□□□ -0.97
HDLBP-243ENST00000488923 ABCA6Q8N139 1617 aa8.98□□□□□ -0.97
HDLBP-243ENST00000488923 RIMBP3Q9UFD9 1639 aa8.98□□□□□ -0.97
HDLBP-243ENST00000488923 PPRC1Q5VV67 1664 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms