RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-222ENST00000488833 KNDC1Q76NI1 1749 aa27.12■■□□□ 1.93
ATG9A-222ENST00000488833 LRPPRCP42704 1394 aaKnown RBP27.11■■□□□ 1.93
ATG9A-222ENST00000488833 TMEM132EQ6IEE7 984 aa27.08■■□□□ 1.93
ATG9A-222ENST00000488833 ABCC11Q96J66 1382 aa27.07■■□□□ 1.92
ATG9A-222ENST00000488833 WAPLQ7Z5K2 1190 aa27.06■■□□□ 1.92
ATG9A-222ENST00000488833 AFF2P51816 1311 aa27.05■■□□□ 1.92
ATG9A-222ENST00000488833 SOS2Q07890 1332 aaPredicted RBP27.05■■□□□ 1.92
ATG9A-222ENST00000488833 YTHDC2Q9H6S0 1430 aaKnown RBP27.05■■□□□ 1.92
ATG9A-222ENST00000488833 MYOM2P54296 1465 aa27.05■■□□□ 1.92
ATG9A-222ENST00000488833 NRXN1Q9ULB1 1477 aa27.03■■□□□ 1.92
ATG9A-222ENST00000488833 PLEKHH1Q9ULM0 1364 aa27.03■■□□□ 1.92
ATG9A-222ENST00000488833 ESCO1Q5FWF5 840 aa27.01■■□□□ 1.91
ATG9A-222ENST00000488833 C8orf37Q96NL8 207 aa27.01■■□□□ 1.91
ATG9A-222ENST00000488833 C14orf93Q9H972 538 aaKnown RBP26.99■■□□□ 1.91
ATG9A-222ENST00000488833 FMN2Q9NZ56 1722 aa26.99■■□□□ 1.91
ATG9A-222ENST00000488833 NPHP3Q7Z494 1330 aa26.98■■□□□ 1.91
ATG9A-222ENST00000488833 NUTM2FA1L443 756 aa26.98■■□□□ 1.91
ATG9A-222ENST00000488833 RXRBP28702 533 aa26.98■■□□□ 1.91
ATG9A-222ENST00000488833 PXDNQ92626 1479 aa26.96■■□□□ 1.91
ATG9A-222ENST00000488833 ADAMTS2O95450 1211 aa26.96■■□□□ 1.91
ATG9A-222ENST00000488833 CFAP70Q5T0N1 1121 aa26.96■■□□□ 1.91
ATG9A-222ENST00000488833 COL22A1Q8NFW1 1626 aaPredicted RBP26.96■■□□□ 1.91
ATG9A-222ENST00000488833 DHX57Q6P158 1386 aaKnown RBP26.96■■□□□ 1.91
ATG9A-222ENST00000488833 CDK12Q9NYV4 1490 aaPredicted RBP26.93■■□□□ 1.9
ATG9A-222ENST00000488833 FOXO3O43524 673 aa26.92■■□□□ 1.9
ATG9A-222ENST00000488833 XPCQ01831 940 aaPredicted RBP26.92■■□□□ 1.9
ATG9A-222ENST00000488833 NGLY1Q96IV0 654 aa26.92■■□□□ 1.9
ATG9A-222ENST00000488833 KIF1AQ12756 1690 aa26.92■■□□□ 1.9
ATG9A-222ENST00000488833 SIRT1Q96EB6 747 aa26.91■■□□□ 1.9
ATG9A-222ENST00000488833 QTRT2Q9H974 415 aaKnown RBP26.89■■□□□ 1.9
ATG9A-222ENST00000488833 DLC1Q96QB1 1528 aa26.87■■□□□ 1.89
ATG9A-222ENST00000488833 SAFB2Q14151 953 aaKnown RBP eCLIP26.87■■□□□ 1.89
ATG9A-222ENST00000488833 PRAM1Q96QH2 718 aa26.87■■□□□ 1.89
ATG9A-222ENST00000488833 ADGRB1O14514 1584 aa26.86■■□□□ 1.89
ATG9A-222ENST00000488833 RGS12O14924 1447 aa26.85■■□□□ 1.89
ATG9A-222ENST00000488833 RGPD8O14715 1765 aaPredicted RBP26.85■■□□□ 1.89
ATG9A-222ENST00000488833 HRCP23327 699 aa26.85■■□□□ 1.89
ATG9A-222ENST00000488833 RBM6P78332 1123 aaKnown RBP26.85■■□□□ 1.89
ATG9A-222ENST00000488833 KDM2AQ9Y2K7 1162 aa26.84■■□□□ 1.89
ATG9A-222ENST00000488833 MARF1Q9Y4F3 1742 aaKnown RBP26.83■■□□□ 1.89
ATG9A-222ENST00000488833 DCAF11Q8TEB1 546 aa26.83■■□□□ 1.89
ATG9A-222ENST00000488833 POGKQ9P215 609 aa26.83■■□□□ 1.89
ATG9A-222ENST00000488833 UPF1Q92900 1129 aaKnown RBP eCLIP26.82■■□□□ 1.88
ATG9A-222ENST00000488833 USP21Q9UK80 565 aa26.82■■□□□ 1.88
ATG9A-222ENST00000488833 ADGRB2O60241 1585 aa26.8■■□□□ 1.88
ATG9A-222ENST00000488833 FNBP4Q8N3X1 1017 aaPredicted RBP26.79■■□□□ 1.88
ATG9A-222ENST00000488833 PHF8Q9UPP1 1060 aa26.79■■□□□ 1.88
ATG9A-222ENST00000488833 SPATA31A3Q5VYP0 1347 aa26.79■■□□□ 1.88
ATG9A-222ENST00000488833 KRT28Q7Z3Y7 464 aa26.78■■□□□ 1.88
ATG9A-222ENST00000488833 TRAK1Q9UPV9 953 aa26.78■■□□□ 1.88
ATG9A-222ENST00000488833 TRPC5Q9UL62 973 aaPredicted RBP26.77■■□□□ 1.88
ATG9A-222ENST00000488833 ATRNO75882 1429 aa26.76■■□□□ 1.87
ATG9A-222ENST00000488833 USP32Q8NFA0 1604 aa26.76■■□□□ 1.87
ATG9A-222ENST00000488833 TNS3Q68CZ2 1445 aa26.75■■□□□ 1.87
ATG9A-222ENST00000488833 ANKARQ7Z5J8 1434 aa26.75■■□□□ 1.87
ATG9A-222ENST00000488833 STAC3Q96MF2 364 aa26.75■■□□□ 1.87
ATG9A-222ENST00000488833 HIRIP3Q9BW71 556 aaPredicted RBP26.73■■□□□ 1.87
ATG9A-222ENST00000488833 PSME1Q06323 249 aa26.72■■□□□ 1.87
ATG9A-222ENST00000488833 MINK1Q8N4C8 1332 aaPredicted RBP26.71■■□□□ 1.87
ATG9A-222ENST00000488833 BCL9LQ86UU0 1499 aa26.71■■□□□ 1.87
ATG9A-222ENST00000488833 ARHGEF28Q8N1W1 1705 aaKnown RBP26.69■■□□□ 1.86
ATG9A-222ENST00000488833 PMFBP1Q8TBY8 1022 aa26.69■■□□□ 1.86
ATG9A-222ENST00000488833 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.69■■□□□ 1.86
ATG9A-222ENST00000488833 SBNO1A3KN83 1393 aa26.69■■□□□ 1.86
ATG9A-222ENST00000488833 EIF3AQ14152 1382 aaKnown RBP26.69■■□□□ 1.86
ATG9A-222ENST00000488833 TULP4Q9NRJ4 1543 aa26.68■■□□□ 1.86
ATG9A-222ENST00000488833 HAP1P54257 671 aaPredicted RBP26.67■■□□□ 1.86
ATG9A-222ENST00000488833 ABCA3Q99758 1704 aa26.67■■□□□ 1.86
ATG9A-222ENST00000488833 PLEKHG5O94827 1062 aa26.66■■□□□ 1.86
ATG9A-222ENST00000488833 LMOD2Q6P5Q4 547 aa26.66■■□□□ 1.86
ATG9A-222ENST00000488833 ARHGEF10O15013 1369 aa26.66■■□□□ 1.86
ATG9A-222ENST00000488833 SLIT2O94813 1529 aa26.65■■□□□ 1.86
ATG9A-222ENST00000488833 ATAD2Q6PL18 1390 aa26.64■■□□□ 1.86
ATG9A-222ENST00000488833 PRR36Q9H6K5 1346 aa26.64■■□□□ 1.85
ATG9A-222ENST00000488833 WASLO00401 505 aaPredicted RBP26.63■■□□□ 1.85
ATG9A-222ENST00000488833 CABLES1Q8TDN4 633 aa26.63■■□□□ 1.85
ATG9A-222ENST00000488833 TRPM3Q9HCF6 1732 aaPredicted RBP26.62■■□□□ 1.85
ATG9A-222ENST00000488833 UNC5CLQ8IV45 518 aa26.61■■□□□ 1.85
ATG9A-222ENST00000488833 KIAA1210Q9ULL0 1709 aa26.61■■□□□ 1.85
ATG9A-222ENST00000488833 PLCH1Q4KWH8 1693 aa26.6■■□□□ 1.85
ATG9A-222ENST00000488833 GPRASP1Q5JY77 1395 aa26.6■■□□□ 1.85
ATG9A-222ENST00000488833 GJD4Q96KN9 370 aaPredicted RBP26.6■■□□□ 1.85
ATG9A-222ENST00000488833 ITSN1Q15811 1721 aa26.59■■□□□ 1.85
ATG9A-222ENST00000488833 RALGAPBQ86X10 1494 aa26.58■■□□□ 1.85
ATG9A-222ENST00000488833 GLI3P10071 1580 aa26.58■■□□□ 1.85
ATG9A-222ENST00000488833 ALS2Q96Q42 1657 aa26.57■■□□□ 1.84
ATG9A-222ENST00000488833 NWD2Q9ULI1 1742 aa26.56■■□□□ 1.84
ATG9A-222ENST00000488833 ATP7BP35670 1465 aa26.56■■□□□ 1.84
ATG9A-222ENST00000488833 NGDNQ8NEJ9 315 aaKnown RBP26.55■■□□□ 1.84
ATG9A-222ENST00000488833 NUDT16Q96DE0 195 aaKnown RBP26.51■■□□□ 1.83
ATG9A-222ENST00000488833 PAK3O75914 559 aaPredicted RBP26.49■■□□□ 1.83
ATG9A-222ENST00000488833 VPS72Q15906 364 aa26.49■■□□□ 1.83
ATG9A-222ENST00000488833 NBPF1Q3BBV0 1214 aa26.49■■□□□ 1.83
ATG9A-222ENST00000488833 TOPAZ1Q8N9V7 1692 aa26.49■■□□□ 1.83
ATG9A-222ENST00000488833 CDK19Q9BWU1 502 aa26.48■■□□□ 1.83
ATG9A-222ENST00000488833 CCDC9Q9Y3X0 531 aaKnown RBP26.48■■□□□ 1.83
ATG9A-222ENST00000488833 CRYBG1Q9Y4K1 1723 aa26.48■■□□□ 1.83
ATG9A-222ENST00000488833 FAM83GA6ND36 823 aa26.47■■□□□ 1.83
ATG9A-222ENST00000488833 BRWD3Q6RI45 1802 aa26.46■■□□□ 1.83
ATG9A-222ENST00000488833 COL14A1Q05707 1796 aaKnown RBP26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms