RNA–Protein interactions for RNA: ENST00000488723.1

CDK5RAP1-214, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 3

Gene CDK5RAP1, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-214ENST00000488723 UBAP1LF5GYI3 381 aa24.23■■□□□ 1.47
CDK5RAP1-214ENST00000488723 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.22■■□□□ 1.47
CDK5RAP1-214ENST00000488723 EIF3AQ14152 1382 aaKnown RBP24.22■■□□□ 1.47
CDK5RAP1-214ENST00000488723 PLEKHH1Q9ULM0 1364 aa24.22■■□□□ 1.47
CDK5RAP1-214ENST00000488723 ARHGEF28Q8N1W1 1705 aaKnown RBP24.21■■□□□ 1.47
CDK5RAP1-214ENST00000488723 FBXO41Q8TF61 875 aa24.21■■□□□ 1.47
CDK5RAP1-214ENST00000488723 NALCNQ8IZF0 1738 aa24.18■■□□□ 1.46
CDK5RAP1-214ENST00000488723 CENPJQ9HC77 1338 aaPredicted RBP24.18■■□□□ 1.46
CDK5RAP1-214ENST00000488723 SLAIN2Q9P270 581 aa24.18■■□□□ 1.46
CDK5RAP1-214ENST00000488723 SLC24A1O60721 1099 aa24.16■■□□□ 1.46
CDK5RAP1-214ENST00000488723 CDC42BPGQ6DT37 1551 aa24.16■■□□□ 1.46
CDK5RAP1-214ENST00000488723 SAFB2Q14151 953 aaKnown RBP eCLIP24.14■■□□□ 1.45
CDK5RAP1-214ENST00000488723 ADGRB2O60241 1585 aa24.13■■□□□ 1.45
CDK5RAP1-214ENST00000488723 SBNO2Q9Y2G9 1366 aa24.12■■□□□ 1.45
CDK5RAP1-214ENST00000488723 WASLO00401 505 aaPredicted RBP24.11■■□□□ 1.45
CDK5RAP1-214ENST00000488723 MINK1Q8N4C8 1332 aaPredicted RBP24.1■■□□□ 1.45
CDK5RAP1-214ENST00000488723 MST1RQ04912 1400 aa24.1■■□□□ 1.45
CDK5RAP1-214ENST00000488723 C1orf167Q5SNV9 1468 aa24.07■■□□□ 1.44
CDK5RAP1-214ENST00000488723 USP47Q96K76 1375 aa24.06■■□□□ 1.44
CDK5RAP1-214ENST00000488723 PIP4K2BP78356 416 aa24.06■■□□□ 1.44
CDK5RAP1-214ENST00000488723 HIRIP3Q9BW71 556 aaPredicted RBP24.06■■□□□ 1.44
CDK5RAP1-214ENST00000488723 QRICH2Q9H0J4 1663 aa24.05■■□□□ 1.44
CDK5RAP1-214ENST00000488723 FMN2Q9NZ56 1722 aa24.05■■□□□ 1.44
CDK5RAP1-214ENST00000488723 ANKARQ7Z5J8 1434 aa24.05■■□□□ 1.44
CDK5RAP1-214ENST00000488723 ZEB1P37275 1124 aaPredicted RBP24.05■■□□□ 1.44
CDK5RAP1-214ENST00000488723 ST20-MTHFSA0A0A6YYL1 179 aa24.04■■□□□ 1.44
CDK5RAP1-214ENST00000488723 CDK19Q9BWU1 502 aa24.04■■□□□ 1.44
CDK5RAP1-214ENST00000488723 EVC2Q86UK5 1308 aa24.04■■□□□ 1.44
CDK5RAP1-214ENST00000488723 BRINP3Q76B58 766 aa24.02■■□□□ 1.44
CDK5RAP1-214ENST00000488723 PUS7Q96PZ0 661 aaKnown RBP24.02■■□□□ 1.44
CDK5RAP1-214ENST00000488723 SCAF1Q9H7N4 1312 aaKnown RBP24.02■■□□□ 1.44
CDK5RAP1-214ENST00000488723 EIF4G2P78344 907 aaKnown RBP eCLIP24.01■■□□□ 1.43
CDK5RAP1-214ENST00000488723 TULP4Q9NRJ4 1543 aa24■■□□□ 1.43
CDK5RAP1-214ENST00000488723 TESK2Q96S53 571 aa24■■□□□ 1.43
CDK5RAP1-214ENST00000488723 ROBO1Q9Y6N7 1651 aa23.99■■□□□ 1.43
CDK5RAP1-214ENST00000488723 ESCO1Q5FWF5 840 aa23.98■■□□□ 1.43
CDK5RAP1-214ENST00000488723 NUDT16Q96DE0 195 aaKnown RBP23.97■■□□□ 1.43
CDK5RAP1-214ENST00000488723 ORAI2Q96SN7 254 aa23.97■■□□□ 1.43
CDK5RAP1-214ENST00000488723 CCDC61Q9Y6R9 512 aa23.97■■□□□ 1.43
CDK5RAP1-214ENST00000488723 SRPK2P78362 688 aaKnown RBP23.96■■□□□ 1.43
CDK5RAP1-214ENST00000488723 NUTM2FA1L443 756 aa23.95■■□□□ 1.42
CDK5RAP1-214ENST00000488723 PRR36Q9H6K5 1346 aa23.94■■□□□ 1.42
CDK5RAP1-214ENST00000488723 ILDR1Q86SU0 546 aaPredicted RBP23.94■■□□□ 1.42
CDK5RAP1-214ENST00000488723 PHF8Q9UPP1 1060 aa23.94■■□□□ 1.42
CDK5RAP1-214ENST00000488723 USP32Q8NFA0 1604 aa23.93■■□□□ 1.42
CDK5RAP1-214ENST00000488723 TMF1P82094 1093 aa23.93■■□□□ 1.42
CDK5RAP1-214ENST00000488723 CDCA8Q53HL2 280 aa23.93■■□□□ 1.42
CDK5RAP1-214ENST00000488723 ATP7BP35670 1465 aa23.93■■□□□ 1.42
CDK5RAP1-214ENST00000488723 NPHP3Q7Z494 1330 aa23.92■■□□□ 1.42
CDK5RAP1-214ENST00000488723 PLEKHG3A1L390 1219 aa23.92■■□□□ 1.42
CDK5RAP1-214ENST00000488723 CABP2Q9NPB3 220 aa23.92■■□□□ 1.42
CDK5RAP1-214ENST00000488723 RGPD8O14715 1765 aaPredicted RBP23.92■■□□□ 1.42
CDK5RAP1-214ENST00000488723 KIF1AQ12756 1690 aa23.92■■□□□ 1.42
CDK5RAP1-214ENST00000488723 AHDC1Q5TGY3 1603 aaPredicted RBP23.92■■□□□ 1.42
CDK5RAP1-214ENST00000488723 ATAD2Q6PL18 1390 aa23.91■■□□□ 1.42
CDK5RAP1-214ENST00000488723 HSPA5P11021 654 aaKnown RBP23.91■■□□□ 1.42
CDK5RAP1-214ENST00000488723 ITSN1Q15811 1721 aa23.9■■□□□ 1.42
CDK5RAP1-214ENST00000488723 HSPA1LP34931 641 aa23.89■■□□□ 1.41
CDK5RAP1-214ENST00000488723 NHSL1Q5SYE7 1610 aa23.88■■□□□ 1.41
CDK5RAP1-214ENST00000488723 SOS2Q07890 1332 aaPredicted RBP23.87■■□□□ 1.41
CDK5RAP1-214ENST00000488723 FOXO3O43524 673 aa23.87■■□□□ 1.41
CDK5RAP1-214ENST00000488723 PSME1Q06323 249 aa23.85■■□□□ 1.41
CDK5RAP1-214ENST00000488723 LRRC59Q96AG4 307 aaKnown RBP23.85■■□□□ 1.41
CDK5RAP1-214ENST00000488723 POLR3AO14802 1390 aaPredicted RBP23.85■■□□□ 1.41
CDK5RAP1-214ENST00000488723 TOPAZ1Q8N9V7 1692 aa23.85■■□□□ 1.41
CDK5RAP1-214ENST00000488723 PHLPP1O60346 1717 aa23.84■■□□□ 1.41
CDK5RAP1-214ENST00000488723 NINLQ9Y2I6 1382 aa23.84■■□□□ 1.41
CDK5RAP1-214ENST00000488723 PMFBP1Q8TBY8 1022 aa23.84■■□□□ 1.41
CDK5RAP1-214ENST00000488723 PPIP5K1Q6PFW1 1433 aa23.84■■□□□ 1.41
CDK5RAP1-214ENST00000488723 NGDNQ8NEJ9 315 aaKnown RBP23.83■■□□□ 1.41
CDK5RAP1-214ENST00000488723 CABP1Q9NZU7 370 aa23.83■■□□□ 1.41
CDK5RAP1-214ENST00000488723 DISP3Q9P2K9 1392 aa23.82■■□□□ 1.4
CDK5RAP1-214ENST00000488723 BRD4O60885 1362 aaPredicted RBP23.81■■□□□ 1.4
CDK5RAP1-214ENST00000488723 KRT28Q7Z3Y7 464 aa23.81■■□□□ 1.4
CDK5RAP1-214ENST00000488723 ZNF692Q9BU19 519 aaPredicted RBP23.81■■□□□ 1.4
CDK5RAP1-214ENST00000488723 ACEP12821 1306 aa23.81■■□□□ 1.4
CDK5RAP1-214ENST00000488723 COL16A1Q07092 1604 aaPredicted RBP23.81■■□□□ 1.4
CDK5RAP1-214ENST00000488723 PXDNQ92626 1479 aa23.8■■□□□ 1.4
CDK5RAP1-214ENST00000488723 DDX17Q92841 729 aaKnown RBP23.79■■□□□ 1.4
CDK5RAP1-214ENST00000488723 SBNO1A3KN83 1393 aa23.78■■□□□ 1.4
CDK5RAP1-214ENST00000488723 JCADQ9P266 1359 aa23.77■■□□□ 1.4
CDK5RAP1-214ENST00000488723 TERF2IPQ9NYB0 399 aa23.75■■□□□ 1.39
CDK5RAP1-214ENST00000488723 TMC1Q8TDI8 760 aa23.74■■□□□ 1.39
CDK5RAP1-214ENST00000488723 SPATA31A3Q5VYP0 1347 aa23.74■■□□□ 1.39
CDK5RAP1-214ENST00000488723 CPSF1Q10570 1443 aaKnown RBP23.74■■□□□ 1.39
CDK5RAP1-214ENST00000488723 SLC12A5Q9H2X9 1139 aa23.73■■□□□ 1.39
CDK5RAP1-214ENST00000488723 XPCQ01831 940 aaPredicted RBP23.72■■□□□ 1.39
CDK5RAP1-214ENST00000488723 HDGFL2Q7Z4V5 671 aaPredicted RBP23.72■■□□□ 1.39
CDK5RAP1-214ENST00000488723 ARHGEF10O15013 1369 aa23.7■■□□□ 1.38
CDK5RAP1-214ENST00000488723 SPATA31A6Q5VVP1 1343 aa23.7■■□□□ 1.38
CDK5RAP1-214ENST00000488723 USP6P35125 1406 aa23.69■■□□□ 1.38
CDK5RAP1-214ENST00000488723 TNS3Q68CZ2 1445 aa23.69■■□□□ 1.38
CDK5RAP1-214ENST00000488723 SHPRHQ149N8 1683 aa23.69■■□□□ 1.38
CDK5RAP1-214ENST00000488723 AKAP12Q02952 1782 aa23.68■■□□□ 1.38
CDK5RAP1-214ENST00000488723 PNPLA6Q8IY17 1366 aa23.68■■□□□ 1.38
CDK5RAP1-214ENST00000488723 TRPM3Q9HCF6 1732 aaPredicted RBP23.68■■□□□ 1.38
CDK5RAP1-214ENST00000488723 C11orf95C9JLR9 678 aaPredicted RBP23.68■■□□□ 1.38
CDK5RAP1-214ENST00000488723 CD163L1Q9NR16 1453 aa23.68■■□□□ 1.38
CDK5RAP1-214ENST00000488723 SSH2Q76I76 1423 aa23.67■■□□□ 1.38
CDK5RAP1-214ENST00000488723 KTN1Q86UP2 1357 aaKnown RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms