RNA–Protein interactions for RNA: ENST00000488684.5

POLR2F-211, Transcript of RNA polymerase II subunit F, human

TSL 2 BASIC

Gene POLR2F, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2F-211	ENST00000488684	LRPPRC	P42704	1394 aa	Known RBP	33.31	■■■□□ 2.92
POLR2F-211	ENST00000488684	TECPR2	O15040	1411 aa		33.3	■■■□□ 2.92
POLR2F-211	ENST00000488684	C8orf37	Q96NL8	207 aa		33.3	■■■□□ 2.92
POLR2F-211	ENST00000488684	PIK3C2G	O75747	1445 aa		33.29	■■■□□ 2.92
POLR2F-211	ENST00000488684	ABCC11	Q96J66	1382 aa		33.28	■■■□□ 2.92
POLR2F-211	ENST00000488684	CDC42BPG	Q6DT37	1551 aa		33.28	■■■□□ 2.92
POLR2F-211	ENST00000488684	ACIN1	Q9UKV3	1341 aa	Known RBP	33.27	■■■□□ 2.92
POLR2F-211	ENST00000488684	ESCO1	Q5FWF5	840 aa		33.26	■■■□□ 2.91
POLR2F-211	ENST00000488684	PLEKHH1	Q9ULM0	1364 aa		33.25	■■■□□ 2.91
POLR2F-211	ENST00000488684	ADAMTS2	O95450	1211 aa		33.25	■■■□□ 2.91
POLR2F-211	ENST00000488684	QTRT2	Q9H974	415 aa	Known RBP	33.22	■■■□□ 2.91
POLR2F-211	ENST00000488684	RAB3GAP2	Q9H2M9	1393 aa		33.21	■■■□□ 2.91
POLR2F-211	ENST00000488684	NUTM2F	A1L443	756 aa		33.21	■■■□□ 2.91
POLR2F-211	ENST00000488684	UPF1	Q92900	1129 aa	Known RBP eCLIP	33.21	■■■□□ 2.91
POLR2F-211	ENST00000488684	KNDC1	Q76NI1	1749 aa		33.21	■■■□□ 2.91
POLR2F-211	ENST00000488684	YTHDC2	Q9H6S0	1430 aa	Known RBP	33.2	■■■□□ 2.91
POLR2F-211	ENST00000488684	CDK12	Q9NYV4	1490 aa	Predicted RBP	33.2	■■■□□ 2.91
POLR2F-211	ENST00000488684	NGLY1	Q96IV0	654 aa		33.2	■■■□□ 2.91
POLR2F-211	ENST00000488684	C14orf93	Q9H972	538 aa	Known RBP	33.2	■■■□□ 2.91
POLR2F-211	ENST00000488684	NPHP3	Q7Z494	1330 aa		33.19	■■■□□ 2.9
POLR2F-211	ENST00000488684	FOXO3	O43524	673 aa		33.18	■■■□□ 2.9
POLR2F-211	ENST00000488684	PXDN	Q92626	1479 aa		33.17	■■■□□ 2.9
POLR2F-211	ENST00000488684	NRXN1	Q9ULB1	1477 aa		33.17	■■■□□ 2.9
POLR2F-211	ENST00000488684	XPC	Q01831	940 aa	Predicted RBP	33.16	■■■□□ 2.9
POLR2F-211	ENST00000488684	CFAP70	Q5T0N1	1121 aa		33.16	■■■□□ 2.9
POLR2F-211	ENST00000488684	RBM6	P78332	1123 aa	Known RBP	33.15	■■■□□ 2.9
POLR2F-211	ENST00000488684	COL22A1	Q8NFW1	1626 aa	Predicted RBP	33.14	■■■□□ 2.9
POLR2F-211	ENST00000488684	SIRT1	Q96EB6	747 aa		33.14	■■■□□ 2.9
POLR2F-211	ENST00000488684	MYOM2	P54296	1465 aa		33.12	■■■□□ 2.89
POLR2F-211	ENST00000488684	FMN2	Q9NZ56	1722 aa		33.11	■■■□□ 2.89
POLR2F-211	ENST00000488684	RGS12	O14924	1447 aa		33.1	■■■□□ 2.89
POLR2F-211	ENST00000488684	FNBP4	Q8N3X1	1017 aa	Predicted RBP	33.09	■■■□□ 2.89
POLR2F-211	ENST00000488684	DHX57	Q6P158	1386 aa	Known RBP	33.09	■■■□□ 2.89
POLR2F-211	ENST00000488684	USP21	Q9UK80	565 aa		33.08	■■■□□ 2.89
POLR2F-211	ENST00000488684	PRAM1	Q96QH2	718 aa		33.02	■■■□□ 2.88
POLR2F-211	ENST00000488684	SAFB2	Q14151	953 aa	Known RBP eCLIP	33.01	■■■□□ 2.87
POLR2F-211	ENST00000488684	TRPC5	Q9UL62	973 aa	Predicted RBP	33.01	■■■□□ 2.87
POLR2F-211	ENST00000488684	RGPD8	O14715	1765 aa	Predicted RBP	33.01	■■■□□ 2.87
POLR2F-211	ENST00000488684	SPATA31A3	Q5VYP0	1347 aa		32.99	■■■□□ 2.87
POLR2F-211	ENST00000488684	KIF1A	Q12756	1690 aa		32.98	■■■□□ 2.87
POLR2F-211	ENST00000488684	KRT28	Q7Z3Y7	464 aa		32.98	■■■□□ 2.87
POLR2F-211	ENST00000488684	ATRN	O75882	1429 aa		32.97	■■■□□ 2.87
POLR2F-211	ENST00000488684	MARF1	Q9Y4F3	1742 aa	Known RBP	32.97	■■■□□ 2.87
POLR2F-211	ENST00000488684	PHF8	Q9UPP1	1060 aa		32.96	■■■□□ 2.87
POLR2F-211	ENST00000488684	BCL9L	Q86UU0	1499 aa		32.96	■■■□□ 2.87
POLR2F-211	ENST00000488684	KDM2A	Q9Y2K7	1162 aa		32.95	■■■□□ 2.87
POLR2F-211	ENST00000488684	ADGRB1	O14514	1584 aa		32.95	■■■□□ 2.86
POLR2F-211	ENST00000488684	DLC1	Q96QB1	1528 aa		32.94	■■■□□ 2.86
POLR2F-211	ENST00000488684	POGK	Q9P215	609 aa		32.94	■■■□□ 2.86
POLR2F-211	ENST00000488684	HRC	P23327	699 aa		32.93	■■■□□ 2.86
POLR2F-211	ENST00000488684	DCAF11	Q8TEB1	546 aa		32.93	■■■□□ 2.86
POLR2F-211	ENST00000488684	TRAK1	Q9UPV9	953 aa		32.9	■■■□□ 2.86
POLR2F-211	ENST00000488684	PSME1	Q06323	249 aa		32.87	■■■□□ 2.85
POLR2F-211	ENST00000488684	USP32	Q8NFA0	1604 aa		32.86	■■■□□ 2.85
POLR2F-211	ENST00000488684	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.85	■■■□□ 2.85
POLR2F-211	ENST00000488684	TNS3	Q68CZ2	1445 aa		32.85	■■■□□ 2.85
POLR2F-211	ENST00000488684	PMFBP1	Q8TBY8	1022 aa		32.84	■■■□□ 2.85
POLR2F-211	ENST00000488684	CABLES1	Q8TDN4	633 aa		32.84	■■■□□ 2.85
POLR2F-211	ENST00000488684	ADGRB2	O60241	1585 aa		32.83	■■■□□ 2.85
POLR2F-211	ENST00000488684	GJD4	Q96KN9	370 aa	Predicted RBP	32.83	■■■□□ 2.85
POLR2F-211	ENST00000488684	ANKAR	Q7Z5J8	1434 aa		32.83	■■■□□ 2.85
POLR2F-211	ENST00000488684	SLIT2	O94813	1529 aa		32.82	■■■□□ 2.85
POLR2F-211	ENST00000488684	EP400	Q96L91	3159 aa		32.82	■■■□□ 2.84
POLR2F-211	ENST00000488684	STAC3	Q96MF2	364 aa		32.82	■■■□□ 2.84
POLR2F-211	ENST00000488684	SBNO1	A3KN83	1393 aa		32.82	■■■□□ 2.84
POLR2F-211	ENST00000488684	ATAD2	Q6PL18	1390 aa		32.82	■■■□□ 2.84
POLR2F-211	ENST00000488684	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.81	■■■□□ 2.84
POLR2F-211	ENST00000488684	UNC5CL	Q8IV45	518 aa		32.81	■■■□□ 2.84
POLR2F-211	ENST00000488684	PLEKHG5	O94827	1062 aa		32.79	■■■□□ 2.84
POLR2F-211	ENST00000488684	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.79	■■■□□ 2.84
POLR2F-211	ENST00000488684	LMOD2	Q6P5Q4	547 aa		32.78	■■■□□ 2.84
POLR2F-211	ENST00000488684	PRR36	Q9H6K5	1346 aa		32.77	■■■□□ 2.84
POLR2F-211	ENST00000488684	WASL	O00401	505 aa	Predicted RBP	32.75	■■■□□ 2.83
POLR2F-211	ENST00000488684	HAP1	P54257	671 aa	Predicted RBP	32.75	■■■□□ 2.83
POLR2F-211	ENST00000488684	ARHGEF10	O15013	1369 aa		32.74	■■■□□ 2.83
POLR2F-211	ENST00000488684	RALGAPB	Q86X10	1494 aa		32.74	■■■□□ 2.83
POLR2F-211	ENST00000488684	GLI3	P10071	1580 aa		32.73	■■■□□ 2.83
POLR2F-211	ENST00000488684	ABCA3	Q99758	1704 aa		32.71	■■■□□ 2.83
POLR2F-211	ENST00000488684	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.7	■■■□□ 2.83
POLR2F-211	ENST00000488684	TULP4	Q9NRJ4	1543 aa		32.7	■■■□□ 2.83
POLR2F-211	ENST00000488684	EIF3A	Q14152	1382 aa	Known RBP	32.69	■■■□□ 2.82
POLR2F-211	ENST00000488684	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.67	■■■□□ 2.82
POLR2F-211	ENST00000488684	FAM83G	A6ND36	823 aa		32.66	■■■□□ 2.82
POLR2F-211	ENST00000488684	GPRASP1	Q5JY77	1395 aa		32.66	■■■□□ 2.82
POLR2F-211	ENST00000488684	PLCH1	Q4KWH8	1693 aa		32.66	■■■□□ 2.82
POLR2F-211	ENST00000488684	VPS72	Q15906	364 aa		32.65	■■■□□ 2.82
POLR2F-211	ENST00000488684	NWD2	Q9ULI1	1742 aa		32.63	■■■□□ 2.81
POLR2F-211	ENST00000488684	ALS2	Q96Q42	1657 aa		32.63	■■■□□ 2.81
POLR2F-211	ENST00000488684	SRCAP	Q6ZRS2	3230 aa		32.63	■■■□□ 2.81
POLR2F-211	ENST00000488684	NGDN	Q8NEJ9	315 aa	Known RBP	32.62	■■■□□ 2.81
POLR2F-211	ENST00000488684	NUDT16	Q96DE0	195 aa	Known RBP	32.6	■■■□□ 2.81
POLR2F-211	ENST00000488684	BRWD3	Q6RI45	1802 aa		32.6	■■■□□ 2.81
POLR2F-211	ENST00000488684	CCDC125	Q86Z20	511 aa		32.59	■■■□□ 2.81
POLR2F-211	ENST00000488684	SEPT12	Q8IYM1	358 aa		32.59	■■■□□ 2.81
POLR2F-211	ENST00000488684	ONECUT3	O60422	494 aa	Predicted RBP	32.58	■■■□□ 2.81
POLR2F-211	ENST00000488684	ATP7B	P35670	1465 aa		32.58	■■■□□ 2.81
POLR2F-211	ENST00000488684	NBPF1	Q3BBV0	1214 aa		32.57	■■■□□ 2.8
POLR2F-211	ENST00000488684	CDK19	Q9BWU1	502 aa		32.57	■■■□□ 2.8
POLR2F-211	ENST00000488684	CCDC9	Q9Y3X0	531 aa	Known RBP	32.57	■■■□□ 2.8
POLR2F-211	ENST00000488684	PAK3	O75914	559 aa	Predicted RBP	32.55	■■■□□ 2.8

Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms