RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 DDX17Q92841 729 aaKnown RBP17.31■□□□□ 0.36
SNU13-208ENST00000488571 CDK12Q9NYV4 1490 aaPredicted RBP17.31■□□□□ 0.36
SNU13-208ENST00000488571 NAIPQ13075 1403 aa17.3■□□□□ 0.36
SNU13-208ENST00000488571 AFF2P51816 1311 aa17.3■□□□□ 0.36
SNU13-208ENST00000488571 RXRBP28702 533 aa17.3■□□□□ 0.36
SNU13-208ENST00000488571 RRBP1Q9P2E9 1410 aaKnown RBP17.3■□□□□ 0.36
SNU13-208ENST00000488571 LAMC1P11047 1609 aa17.29■□□□□ 0.36
SNU13-208ENST00000488571 LRRC59Q96AG4 307 aaKnown RBP17.29■□□□□ 0.36
SNU13-208ENST00000488571 PNPLA6Q8IY17 1366 aa17.28■□□□□ 0.36
SNU13-208ENST00000488571 PTCH1Q13635 1447 aa17.28■□□□□ 0.36
SNU13-208ENST00000488571 C1orf167Q5SNV9 1468 aa17.27■□□□□ 0.36
SNU13-208ENST00000488571 ROBO2Q9HCK4 1378 aa17.26■□□□□ 0.35
SNU13-208ENST00000488571 PRAG1Q86YV5 1406 aa17.25■□□□□ 0.35
SNU13-208ENST00000488571 RGS12O14924 1447 aa17.23■□□□□ 0.35
SNU13-208ENST00000488571 PPLO60437 1756 aa17.23■□□□□ 0.35
SNU13-208ENST00000488571 VGFO15240 615 aaPredicted RBP17.22■□□□□ 0.35
SNU13-208ENST00000488571 C8orf37Q96NL8 207 aa17.22■□□□□ 0.35
SNU13-208ENST00000488571 SOS2Q07890 1332 aaPredicted RBP17.21■□□□□ 0.35
SNU13-208ENST00000488571 POLA2Q14181 598 aa17.21■□□□□ 0.35
SNU13-208ENST00000488571 ORAI2Q96SN7 254 aa17.21■□□□□ 0.35
SNU13-208ENST00000488571 HFM1A2PYH4 1435 aa17.21■□□□□ 0.34
SNU13-208ENST00000488571 QTRT2Q9H974 415 aaKnown RBP17.2■□□□□ 0.34
SNU13-208ENST00000488571 RBM6P78332 1123 aaKnown RBP17.19■□□□□ 0.34
SNU13-208ENST00000488571 RPGRIP1LQ68CZ1 1315 aa17.19■□□□□ 0.34
SNU13-208ENST00000488571 ADAMTS2O95450 1211 aa17.18■□□□□ 0.34
SNU13-208ENST00000488571 COL22A1Q8NFW1 1626 aaPredicted RBP17.18■□□□□ 0.34
SNU13-208ENST00000488571 ATF5Q9Y2D1 282 aaPredicted RBP17.17■□□□□ 0.34
SNU13-208ENST00000488571 NGLY1Q96IV0 654 aa17.16■□□□□ 0.34
SNU13-208ENST00000488571 CDC42BPGQ6DT37 1551 aa17.15■□□□□ 0.34
SNU13-208ENST00000488571 PXDNQ92626 1479 aa17.12■□□□□ 0.33
SNU13-208ENST00000488571 FNBP4Q8N3X1 1017 aaPredicted RBP17.12■□□□□ 0.33
SNU13-208ENST00000488571 IFT172Q9UG01 1749 aa17.12■□□□□ 0.33
SNU13-208ENST00000488571 MYOM2P54296 1465 aa17.12■□□□□ 0.33
SNU13-208ENST00000488571 USP21Q9UK80 565 aa17.11■□□□□ 0.33
SNU13-208ENST00000488571 ADGRF5Q8IZF2 1346 aa17.11■□□□□ 0.33
SNU13-208ENST00000488571 MARF1Q9Y4F3 1742 aaKnown RBP17.1■□□□□ 0.33
SNU13-208ENST00000488571 TECPR2O15040 1411 aa17.1■□□□□ 0.33
SNU13-208ENST00000488571 ATRNO75882 1429 aa17.1■□□□□ 0.33
SNU13-208ENST00000488571 SPATA31E1Q6ZUB1 1445 aa17.1■□□□□ 0.33
SNU13-208ENST00000488571 ESCO1Q5FWF5 840 aa17.09■□□□□ 0.33
SNU13-208ENST00000488571 NPHP3Q7Z494 1330 aa17.09■□□□□ 0.33
SNU13-208ENST00000488571 KNDC1Q76NI1 1749 aa17.08■□□□□ 0.32
SNU13-208ENST00000488571 TRPC5Q9UL62 973 aaPredicted RBP17.08■□□□□ 0.32
SNU13-208ENST00000488571 CCDC144AA2RUR9 1427 aa17.07■□□□□ 0.32
SNU13-208ENST00000488571 ATAD2Q6PL18 1390 aa17.07■□□□□ 0.32
SNU13-208ENST00000488571 WAPLQ7Z5K2 1190 aa17.07■□□□□ 0.32
SNU13-208ENST00000488571 BCL9LQ86UU0 1499 aa17.06■□□□□ 0.32
SNU13-208ENST00000488571 LRPPRCP42704 1394 aaKnown RBP17.06■□□□□ 0.32
SNU13-208ENST00000488571 FOXO3O43524 673 aa17.06■□□□□ 0.32
SNU13-208ENST00000488571 XPCQ01831 940 aaPredicted RBP17.06■□□□□ 0.32
SNU13-208ENST00000488571 PLEKHH1Q9ULM0 1364 aa17.05■□□□□ 0.32
SNU13-208ENST00000488571 FMN2Q9NZ56 1722 aa17.05■□□□□ 0.32
SNU13-208ENST00000488571 RGL3Q3MIN7 710 aa17.05■□□□□ 0.32
SNU13-208ENST00000488571 STK26Q9P289 416 aa17.05■□□□□ 0.32
SNU13-208ENST00000488571 PIK3C2GO75747 1445 aa17.04■□□□□ 0.32
SNU13-208ENST00000488571 ABCC11Q96J66 1382 aa17.04■□□□□ 0.32
SNU13-208ENST00000488571 ANKRD30BQ9BXX2 1392 aa17.04■□□□□ 0.32
SNU13-208ENST00000488571 EP400Q96L91 3159 aa17.03■□□□□ 0.32
SNU13-208ENST00000488571 NUTM2FA1L443 756 aa17.03■□□□□ 0.32
SNU13-208ENST00000488571 TMEM132EQ6IEE7 984 aa17.03■□□□□ 0.32
SNU13-208ENST00000488571 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.02■□□□□ 0.32
SNU13-208ENST00000488571 KIF1AQ12756 1690 aa17.01■□□□□ 0.31
SNU13-208ENST00000488571 MPHOSPH9Q99550 1183 aa17.01■□□□□ 0.31
SNU13-208ENST00000488571 YTHDC2Q9H6S0 1430 aaKnown RBP17.01■□□□□ 0.31
SNU13-208ENST00000488571 SRCAPQ6ZRS2 3230 aa17.01■□□□□ 0.31
SNU13-208ENST00000488571 SPATA31A3Q5VYP0 1347 aa16.99■□□□□ 0.31
SNU13-208ENST00000488571 SLIT2O94813 1529 aa16.99■□□□□ 0.31
SNU13-208ENST00000488571 RGPD8O14715 1765 aaPredicted RBP16.99■□□□□ 0.31
SNU13-208ENST00000488571 GLI3P10071 1580 aa16.98■□□□□ 0.31
SNU13-208ENST00000488571 GJD4Q96KN9 370 aaPredicted RBP16.98■□□□□ 0.31
SNU13-208ENST00000488571 USP32Q8NFA0 1604 aa16.98■□□□□ 0.31
SNU13-208ENST00000488571 NRXN1Q9ULB1 1477 aa16.98■□□□□ 0.31
SNU13-208ENST00000488571 RBM42Q9BTD8 480 aaKnown RBP16.96■□□□□ 0.31
SNU13-208ENST00000488571 RALGAPBQ86X10 1494 aa16.95■□□□□ 0.3
SNU13-208ENST00000488571 SIRT1Q96EB6 747 aa16.95■□□□□ 0.3
SNU13-208ENST00000488571 C14orf93Q9H972 538 aaKnown RBP16.95■□□□□ 0.3
SNU13-208ENST00000488571 KRT28Q7Z3Y7 464 aa16.94■□□□□ 0.3
SNU13-208ENST00000488571 UNC5CLQ8IV45 518 aa16.94■□□□□ 0.3
SNU13-208ENST00000488571 BRWD3Q6RI45 1802 aa16.93■□□□□ 0.3
SNU13-208ENST00000488571 ABCA3Q99758 1704 aa16.93■□□□□ 0.3
SNU13-208ENST00000488571 ATXN8OSP0DMR3 200 aa16.93■□□□□ 0.3
SNU13-208ENST00000488571 TNS3Q68CZ2 1445 aa16.93■□□□□ 0.3
SNU13-208ENST00000488571 PLCH1Q4KWH8 1693 aa16.92■□□□□ 0.3
SNU13-208ENST00000488571 CCDC125Q86Z20 511 aa16.92■□□□□ 0.3
SNU13-208ENST00000488571 CFAP70Q5T0N1 1121 aa16.91■□□□□ 0.3
SNU13-208ENST00000488571 ZRANB1Q9UGI0 708 aa16.91■□□□□ 0.3
SNU13-208ENST00000488571 PHF8Q9UPP1 1060 aa16.91■□□□□ 0.3
SNU13-208ENST00000488571 CABLES1Q8TDN4 633 aa16.9■□□□□ 0.3
SNU13-208ENST00000488571 NWD2Q9ULI1 1742 aa16.9■□□□□ 0.3
SNU13-208ENST00000488571 DHX57Q6P158 1386 aaKnown RBP16.89■□□□□ 0.3
SNU13-208ENST00000488571 SBNO1A3KN83 1393 aa16.89■□□□□ 0.29
SNU13-208ENST00000488571 DLC1Q96QB1 1528 aa16.88■□□□□ 0.29
SNU13-208ENST00000488571 PRAM1Q96QH2 718 aa16.88■□□□□ 0.29
SNU13-208ENST00000488571 ADGRB2O60241 1585 aa16.88■□□□□ 0.29
SNU13-208ENST00000488571 BLMP54132 1417 aaPredicted RBP16.87■□□□□ 0.29
SNU13-208ENST00000488571 ADGRB1O14514 1584 aa16.87■□□□□ 0.29
SNU13-208ENST00000488571 PSME1Q06323 249 aa16.87■□□□□ 0.29
SNU13-208ENST00000488571 SAFB2Q14151 953 aaKnown RBP eCLIP16.87■□□□□ 0.29
SNU13-208ENST00000488571 VPS72Q15906 364 aa16.86■□□□□ 0.29
SNU13-208ENST00000488571 ZBTB12Q9Y330 459 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms