RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 TRIM6-TRIM34B2RNG4 842 aa9.56□□□□□ -0.88
CDHR3-213ENST00000488386 GNPATO15228 680 aa9.56□□□□□ -0.88
CDHR3-213ENST00000488386 HIC1Q14526 733 aa9.56□□□□□ -0.88
CDHR3-213ENST00000488386 ANKRD13DQ6ZTN6 518 aa9.56□□□□□ -0.88
CDHR3-213ENST00000488386 TTC13Q8NBP0 860 aa9.56□□□□□ -0.88
CDHR3-213ENST00000488386 CERKQ8TCT0 537 aa9.56□□□□□ -0.88
CDHR3-213ENST00000488386 MYO5CQ9NQX4 1742 aa9.56□□□□□ -0.88
CDHR3-213ENST00000488386 ADGRD1Q6QNK2 874 aa9.55□□□□□ -0.88
CDHR3-213ENST00000488386 SLC4A5Q9BY07 1137 aa9.55□□□□□ -0.88
CDHR3-213ENST00000488386 SIGLEC1Q9BZZ2 1709 aa9.55□□□□□ -0.88
CDHR3-213ENST00000488386 TROQ12816 1431 aaPredicted RBP9.55□□□□□ -0.88
CDHR3-213ENST00000488386 CASKIN1Q8WXD9 1431 aa9.55□□□□□ -0.88
CDHR3-213ENST00000488386 CFAP74Q9C0B2 1584 aa9.54□□□□□ -0.88
CDHR3-213ENST00000488386 DENND4BO75064 1496 aaPredicted RBP9.54□□□□□ -0.88
CDHR3-213ENST00000488386 LOC105371045A0A1W2PR82 267 aa9.54□□□□□ -0.88
CDHR3-213ENST00000488386 ZMYND10O75800 440 aa9.54□□□□□ -0.88
CDHR3-213ENST00000488386 FAM161AQ3B820 660 aa9.54□□□□□ -0.88
CDHR3-213ENST00000488386 RBM27Q9P2N5 1060 aaKnown RBP9.54□□□□□ -0.88
CDHR3-213ENST00000488386 PHLDB1Q86UU1 1377 aa9.53□□□□□ -0.88
CDHR3-213ENST00000488386 TK2O00142 265 aa9.53□□□□□ -0.88
CDHR3-213ENST00000488386 TPRNQ4KMQ1 711 aa9.53□□□□□ -0.88
CDHR3-213ENST00000488386 PLCH2O75038 1416 aa9.53□□□□□ -0.88
CDHR3-213ENST00000488386 SCAPERQ9BY12 1400 aa9.53□□□□□ -0.88
CDHR3-213ENST00000488386 YEATS2Q9ULM3 1422 aa9.53□□□□□ -0.88
CDHR3-213ENST00000488386 ARID4BQ4LE39 1312 aaPredicted RBP9.53□□□□□ -0.88
CDHR3-213ENST00000488386 ARHGAP5Q13017 1502 aa9.52□□□□□ -0.88
CDHR3-213ENST00000488386 ARHGEF40Q8TER5 1519 aa9.52□□□□□ -0.88
CDHR3-213ENST00000488386 HRO43593 1189 aa9.52□□□□□ -0.89
CDHR3-213ENST00000488386 KIAA1468Q9P260 1216 aa9.52□□□□□ -0.89
CDHR3-213ENST00000488386 CDC42BPBQ9Y5S2 1711 aa9.52□□□□□ -0.89
CDHR3-213ENST00000488386 PRKCSHP14314 528 aaPredicted RBP9.51□□□□□ -0.89
CDHR3-213ENST00000488386 CDK11AQ9UQ88 783 aaPredicted RBP9.51□□□□□ -0.89
CDHR3-213ENST00000488386 FYCO1Q9BQS8 1478 aa9.51□□□□□ -0.89
CDHR3-213ENST00000488386 CEP162Q5TB80 1403 aa9.5□□□□□ -0.89
CDHR3-213ENST00000488386 MADDQ8WXG6 1647 aa9.5□□□□□ -0.89
CDHR3-213ENST00000488386 BHMG1C9JSJ3 638 aaPredicted RBP9.5□□□□□ -0.89
CDHR3-213ENST00000488386 SMAPO00193 183 aa9.5□□□□□ -0.89
CDHR3-213ENST00000488386 BARGINQ6ZT62 677 aa9.5□□□□□ -0.89
CDHR3-213ENST00000488386 SEPT9Q9UHD8 586 aaPredicted RBP9.5□□□□□ -0.89
CDHR3-213ENST00000488386 CCDC18Q5T9S5 1454 aa9.5□□□□□ -0.89
CDHR3-213ENST00000488386 ADAMTSL3P82987 1691 aa9.5□□□□□ -0.89
CDHR3-213ENST00000488386 BCORL1Q5H9F3 1711 aa9.5□□□□□ -0.89
CDHR3-213ENST00000488386 CDC42BPAQ5VT25 1732 aa9.5□□□□□ -0.89
CDHR3-213ENST00000488386 ZFYVE16Q7Z3T8 1539 aa9.5□□□□□ -0.89
CDHR3-213ENST00000488386 HECW2Q9P2P5 1572 aa9.5□□□□□ -0.89
CDHR3-213ENST00000488386 POGZQ7Z3K3 1410 aa9.49□□□□□ -0.89
CDHR3-213ENST00000488386 MAP2K5Q13163 448 aa9.49□□□□□ -0.89
CDHR3-213ENST00000488386 MLECQ14165 292 aa9.49□□□□□ -0.89
CDHR3-213ENST00000488386 EFCAB2Q5VUJ9 269 aa9.49□□□□□ -0.89
CDHR3-213ENST00000488386 RABGEF1Q9UJ41 708 aa9.49□□□□□ -0.89
CDHR3-213ENST00000488386 ADGRG1Q9Y653 693 aa9.49□□□□□ -0.89
CDHR3-213ENST00000488386 PREX2Q70Z35 1606 aa9.49□□□□□ -0.89
CDHR3-213ENST00000488386 RIMS1Q86UR5 1692 aaKnown RBP9.48□□□□□ -0.89
CDHR3-213ENST00000488386 ZMYM4Q5VZL5 1548 aa9.48□□□□□ -0.89
CDHR3-213ENST00000488386 ONECUT3O60422 494 aaPredicted RBP9.48□□□□□ -0.89
CDHR3-213ENST00000488386 AFAP1Q8N556 730 aa9.48□□□□□ -0.89
CDHR3-213ENST00000488386 ARHGEF12Q9NZN5 1544 aa9.47□□□□□ -0.89
CDHR3-213ENST00000488386 NUDT18Q6ZVK8 323 aa9.47□□□□□ -0.89
CDHR3-213ENST00000488386 CCDC102AQ96A19 550 aa9.47□□□□□ -0.89
CDHR3-213ENST00000488386 PCDH10Q9P2E7 1040 aa9.47□□□□□ -0.89
CDHR3-213ENST00000488386 PNMA3Q9UL41 463 aa9.47□□□□□ -0.89
CDHR3-213ENST00000488386 MYT1LQ9UL68 1186 aa9.47□□□□□ -0.89
CDHR3-213ENST00000488386 ZNF777Q9ULD5 760 aaPredicted RBP9.47□□□□□ -0.89
CDHR3-213ENST00000488386 PTPRMP28827 1452 aa9.47□□□□□ -0.89
CDHR3-213ENST00000488386 ITSN2Q9NZM3 1697 aa9.46□□□□□ -0.89
CDHR3-213ENST00000488386 NBPF26B4DH59 902 aa9.46□□□□□ -0.9
CDHR3-213ENST00000488386 PACS2Q86VP3 889 aa9.46□□□□□ -0.9
CDHR3-213ENST00000488386 TATDN2Q93075 761 aa9.46□□□□□ -0.9
CDHR3-213ENST00000488386 TRAPPC8Q9Y2L5 1435 aa9.46□□□□□ -0.9
CDHR3-213ENST00000488386 IRF6O14896 467 aa9.45□□□□□ -0.9
CDHR3-213ENST00000488386 PHOX2BQ99453 314 aa9.45□□□□□ -0.9
CDHR3-213ENST00000488386 EYA1Q99502 592 aa9.45□□□□□ -0.9
CDHR3-213ENST00000488386 SLC24A3Q9HC58 644 aa9.45□□□□□ -0.9
CDHR3-213ENST00000488386 ABCC1P33527 1531 aa9.45□□□□□ -0.9
CDHR3-213ENST00000488386 SAMD9LQ8IVG5 1584 aa9.45□□□□□ -0.9
CDHR3-213ENST00000488386 NLRP7Q8WX94 980 aa9.44□□□□□ -0.9
CDHR3-213ENST00000488386 ABCA6Q8N139 1617 aa9.44□□□□□ -0.9
CDHR3-213ENST00000488386 KDM5CP41229 1560 aa9.43□□□□□ -0.9
CDHR3-213ENST00000488386 DIP2CQ9Y2E4 1556 aa9.43□□□□□ -0.9
CDHR3-213ENST00000488386 GPATCH8Q9UKJ3 1502 aaKnown RBP9.43□□□□□ -0.9
CDHR3-213ENST00000488386 ZNF518AQ6AHZ1 1483 aa9.43□□□□□ -0.9
CDHR3-213ENST00000488386 MTUS2Q5JR59 1369 aa9.43□□□□□ -0.9
CDHR3-213ENST00000488386 MINK1Q8N4C8 1332 aaPredicted RBP9.43□□□□□ -0.9
CDHR3-213ENST00000488386 METTL3Q86U44 580 aaKnown RBP9.43□□□□□ -0.9
CDHR3-213ENST00000488386 SPNS2Q8IVW8 549 aa9.43□□□□□ -0.9
CDHR3-213ENST00000488386 PXYLP1Q8TE99 480 aa9.43□□□□□ -0.9
CDHR3-213ENST00000488386 NBPF3Q9H094 633 aa9.43□□□□□ -0.9
CDHR3-213ENST00000488386 FER1L4A9Z1Z3 1794 aa9.42□□□□□ -0.9
CDHR3-213ENST00000488386 SYCP2Q9BX26 1530 aa9.42□□□□□ -0.9
CDHR3-213ENST00000488386 MAGI2Q86UL8 1455 aa9.42□□□□□ -0.9
CDHR3-213ENST00000488386 C9orf84Q5VXU9 1444 aa9.42□□□□□ -0.9
CDHR3-213ENST00000488386 HNRNPMP52272 730 aaKnown RBP eCLIP9.42□□□□□ -0.9
CDHR3-213ENST00000488386 KRI1Q8N9T8 703 aaKnown RBP9.42□□□□□ -0.9
CDHR3-213ENST00000488386 TIAM1Q13009 1591 aa9.41□□□□□ -0.9
CDHR3-213ENST00000488386 ATP10AO60312 1499 aa9.41□□□□□ -0.9
CDHR3-213ENST00000488386 MRPL50Q8N5N7 158 aaKnown RBP9.41□□□□□ -0.9
CDHR3-213ENST00000488386 EHBP1L1Q8N3D4 1523 aa9.41□□□□□ -0.9
CDHR3-213ENST00000488386 KIDINS220Q9ULH0 1771 aa9.4□□□□□ -0.9
CDHR3-213ENST00000488386 CCNB3Q8WWL7 1395 aa9.4□□□□□ -0.9
CDHR3-213ENST00000488386 ZNF644Q9H582 1327 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms