RNA–Protein interactions for RNA: ENST00000488363.1

MMP11-210, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-210ENST00000488363 CDC42BPGQ6DT37 1551 aa26.72■■□□□ 1.87
MMP11-210ENST00000488363 MYOM2P54296 1465 aa26.72■■□□□ 1.87
MMP11-210ENST00000488363 YTHDC2Q9H6S0 1430 aaKnown RBP26.72■■□□□ 1.87
MMP11-210ENST00000488363 NRXN1Q9ULB1 1477 aa26.71■■□□□ 1.87
MMP11-210ENST00000488363 HRCP23327 699 aa26.71■■□□□ 1.87
MMP11-210ENST00000488363 ZNF772Q68DY9 489 aaPredicted RBP26.71■■□□□ 1.87
MMP11-210ENST00000488363 C14orf93Q9H972 538 aaKnown RBP26.71■■□□□ 1.87
MMP11-210ENST00000488363 PNPLA6Q8IY17 1366 aa26.71■■□□□ 1.87
MMP11-210ENST00000488363 KNDC1Q76NI1 1749 aa26.7■■□□□ 1.87
MMP11-210ENST00000488363 LAMC1P11047 1609 aa26.7■■□□□ 1.86
MMP11-210ENST00000488363 PLEKHH1Q9ULM0 1364 aa26.69■■□□□ 1.86
MMP11-210ENST00000488363 CFAP70Q5T0N1 1121 aa26.68■■□□□ 1.86
MMP11-210ENST00000488363 SOS2Q07890 1332 aaPredicted RBP26.67■■□□□ 1.86
MMP11-210ENST00000488363 ESCO1Q5FWF5 840 aa26.66■■□□□ 1.86
MMP11-210ENST00000488363 SIRT1Q96EB6 747 aa26.65■■□□□ 1.86
MMP11-210ENST00000488363 DHX57Q6P158 1386 aaKnown RBP26.65■■□□□ 1.86
MMP11-210ENST00000488363 NUTM2FA1L443 756 aa26.62■■□□□ 1.85
MMP11-210ENST00000488363 AFF2P51816 1311 aa26.62■■□□□ 1.85
MMP11-210ENST00000488363 NPHP3Q7Z494 1330 aa26.62■■□□□ 1.85
MMP11-210ENST00000488363 C8orf37Q96NL8 207 aa26.59■■□□□ 1.85
MMP11-210ENST00000488363 FOXO3O43524 673 aa26.57■■□□□ 1.84
MMP11-210ENST00000488363 DCAF11Q8TEB1 546 aa26.57■■□□□ 1.84
MMP11-210ENST00000488363 KDM2AQ9Y2K7 1162 aa26.57■■□□□ 1.84
MMP11-210ENST00000488363 ADAMTS2O95450 1211 aa26.56■■□□□ 1.84
MMP11-210ENST00000488363 PRAM1Q96QH2 718 aa26.56■■□□□ 1.84
MMP11-210ENST00000488363 FMN2Q9NZ56 1722 aa26.56■■□□□ 1.84
MMP11-210ENST00000488363 RXRBP28702 533 aa26.55■■□□□ 1.84
MMP11-210ENST00000488363 PXDNQ92626 1479 aa26.55■■□□□ 1.84
MMP11-210ENST00000488363 XPCQ01831 940 aaPredicted RBP26.54■■□□□ 1.84
MMP11-210ENST00000488363 SAFB2Q14151 953 aaKnown RBP eCLIP26.54■■□□□ 1.84
MMP11-210ENST00000488363 STAC3Q96MF2 364 aa26.53■■□□□ 1.84
MMP11-210ENST00000488363 ADGRB1O14514 1584 aa26.52■■□□□ 1.84
MMP11-210ENST00000488363 NGLY1Q96IV0 654 aa26.52■■□□□ 1.84
MMP11-210ENST00000488363 DLC1Q96QB1 1528 aa26.52■■□□□ 1.84
MMP11-210ENST00000488363 POGKQ9P215 609 aa26.52■■□□□ 1.84
MMP11-210ENST00000488363 COL22A1Q8NFW1 1626 aaPredicted RBP26.5■■□□□ 1.83
MMP11-210ENST00000488363 TRAK1Q9UPV9 953 aa26.49■■□□□ 1.83
MMP11-210ENST00000488363 KIF1AQ12756 1690 aa26.48■■□□□ 1.83
MMP11-210ENST00000488363 QTRT2Q9H974 415 aaKnown RBP26.48■■□□□ 1.83
MMP11-210ENST00000488363 PHF8Q9UPP1 1060 aa26.46■■□□□ 1.83
MMP11-210ENST00000488363 CDK12Q9NYV4 1490 aaPredicted RBP26.46■■□□□ 1.83
MMP11-210ENST00000488363 RBM6P78332 1123 aaKnown RBP26.44■■□□□ 1.82
MMP11-210ENST00000488363 KRT28Q7Z3Y7 464 aa26.44■■□□□ 1.82
MMP11-210ENST00000488363 SPATA31A3Q5VYP0 1347 aa26.42■■□□□ 1.82
MMP11-210ENST00000488363 USP21Q9UK80 565 aa26.42■■□□□ 1.82
MMP11-210ENST00000488363 RGPD8O14715 1765 aaPredicted RBP26.42■■□□□ 1.82
MMP11-210ENST00000488363 FNBP4Q8N3X1 1017 aaPredicted RBP26.41■■□□□ 1.82
MMP11-210ENST00000488363 ADGRB2O60241 1585 aa26.41■■□□□ 1.82
MMP11-210ENST00000488363 ANKARQ7Z5J8 1434 aa26.4■■□□□ 1.82
MMP11-210ENST00000488363 HIRIP3Q9BW71 556 aaPredicted RBP26.4■■□□□ 1.82
MMP11-210ENST00000488363 MINK1Q8N4C8 1332 aaPredicted RBP26.39■■□□□ 1.82
MMP11-210ENST00000488363 PSME1Q06323 249 aa26.39■■□□□ 1.82
MMP11-210ENST00000488363 TRPC5Q9UL62 973 aaPredicted RBP26.37■■□□□ 1.81
MMP11-210ENST00000488363 RGS12O14924 1447 aa26.37■■□□□ 1.81
MMP11-210ENST00000488363 USP32Q8NFA0 1604 aa26.36■■□□□ 1.81
MMP11-210ENST00000488363 EIF3AQ14152 1382 aaKnown RBP26.35■■□□□ 1.81
MMP11-210ENST00000488363 TNS3Q68CZ2 1445 aa26.35■■□□□ 1.81
MMP11-210ENST00000488363 PMFBP1Q8TBY8 1022 aa26.35■■□□□ 1.81
MMP11-210ENST00000488363 UPF1Q92900 1129 aaKnown RBP eCLIP26.35■■□□□ 1.81
MMP11-210ENST00000488363 SBNO1A3KN83 1393 aa26.33■■□□□ 1.81
MMP11-210ENST00000488363 WASLO00401 505 aaPredicted RBP26.33■■□□□ 1.81
MMP11-210ENST00000488363 MARF1Q9Y4F3 1742 aaKnown RBP26.33■■□□□ 1.81
MMP11-210ENST00000488363 ATRNO75882 1429 aa26.32■■□□□ 1.8
MMP11-210ENST00000488363 TULP4Q9NRJ4 1543 aa26.31■■□□□ 1.8
MMP11-210ENST00000488363 PRR36Q9H6K5 1346 aa26.31■■□□□ 1.8
MMP11-210ENST00000488363 ARHGEF28Q8N1W1 1705 aaKnown RBP26.31■■□□□ 1.8
MMP11-210ENST00000488363 BCL9LQ86UU0 1499 aa26.3■■□□□ 1.8
MMP11-210ENST00000488363 LMOD2Q6P5Q4 547 aa26.3■■□□□ 1.8
MMP11-210ENST00000488363 HAP1P54257 671 aaPredicted RBP26.29■■□□□ 1.8
MMP11-210ENST00000488363 ARHGEF10O15013 1369 aa26.29■■□□□ 1.8
MMP11-210ENST00000488363 KIAA1210Q9ULL0 1709 aa26.28■■□□□ 1.8
MMP11-210ENST00000488363 CABLES1Q8TDN4 633 aa26.27■■□□□ 1.8
MMP11-210ENST00000488363 PLEKHG5O94827 1062 aa26.26■■□□□ 1.79
MMP11-210ENST00000488363 GPRASP1Q5JY77 1395 aa26.25■■□□□ 1.79
MMP11-210ENST00000488363 NBPF1Q3BBV0 1214 aa26.24■■□□□ 1.79
MMP11-210ENST00000488363 SLIT2O94813 1529 aa26.24■■□□□ 1.79
MMP11-210ENST00000488363 UNC5CLQ8IV45 518 aa26.23■■□□□ 1.79
MMP11-210ENST00000488363 NGDNQ8NEJ9 315 aaKnown RBP26.23■■□□□ 1.79
MMP11-210ENST00000488363 GJD4Q96KN9 370 aaPredicted RBP26.22■■□□□ 1.79
MMP11-210ENST00000488363 NUDT16Q96DE0 195 aaKnown RBP26.21■■□□□ 1.79
MMP11-210ENST00000488363 TRPM3Q9HCF6 1732 aaPredicted RBP26.21■■□□□ 1.79
MMP11-210ENST00000488363 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.2■■□□□ 1.79
MMP11-210ENST00000488363 ATP7BP35670 1465 aa26.2■■□□□ 1.78
MMP11-210ENST00000488363 CDK19Q9BWU1 502 aa26.2■■□□□ 1.78
MMP11-210ENST00000488363 L3MBTL2Q969R5 705 aa26.18■■□□□ 1.78
MMP11-210ENST00000488363 ABCA3Q99758 1704 aa26.18■■□□□ 1.78
MMP11-210ENST00000488363 ATAD2Q6PL18 1390 aa26.18■■□□□ 1.78
MMP11-210ENST00000488363 SIN3AQ96ST3 1273 aa26.17■■□□□ 1.78
MMP11-210ENST00000488363 ITSN1Q15811 1721 aa26.17■■□□□ 1.78
MMP11-210ENST00000488363 ALS2Q96Q42 1657 aa26.15■■□□□ 1.78
MMP11-210ENST00000488363 PAK3O75914 559 aaPredicted RBP26.15■■□□□ 1.78
MMP11-210ENST00000488363 RALGAPBQ86X10 1494 aa26.15■■□□□ 1.78
MMP11-210ENST00000488363 NEUROD1Q13562 356 aa26.13■■□□□ 1.77
MMP11-210ENST00000488363 CENPJQ9HC77 1338 aaPredicted RBP26.13■■□□□ 1.77
MMP11-210ENST00000488363 FAM83GA6ND36 823 aa26.12■■□□□ 1.77
MMP11-210ENST00000488363 CCDC61Q9Y6R9 512 aa26.12■■□□□ 1.77
MMP11-210ENST00000488363 PLCH1Q4KWH8 1693 aa26.12■■□□□ 1.77
MMP11-210ENST00000488363 GLI3P10071 1580 aa26.12■■□□□ 1.77
MMP11-210ENST00000488363 VPS72Q15906 364 aa26.11■■□□□ 1.77
MMP11-210ENST00000488363 NWD2Q9ULI1 1742 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms