RNA–Protein interactions for RNA: ENST00000488175.5

GCOM1-210, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,601 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-210ENST00000488175 PHF23Q9BUL5 403 aaPredicted RBP20.92■□□□□ 0.94
GCOM1-210ENST00000488175 DEPDC5O75140 1603 aa20.92■□□□□ 0.94
GCOM1-210ENST00000488175 NOS1P29475 1434 aa20.92■□□□□ 0.94
GCOM1-210ENST00000488175 WDR63Q8IWG1 891 aa20.91■□□□□ 0.94
GCOM1-210ENST00000488175 UPF2Q9HAU5 1272 aaKnown RBP20.91■□□□□ 0.94
GCOM1-210ENST00000488175 NLRP1Q9C000 1473 aa20.91■□□□□ 0.94
GCOM1-210ENST00000488175 SPRYD3Q8NCJ5 442 aa20.91■□□□□ 0.94
GCOM1-210ENST00000488175 ATP7AQ04656 1500 aa20.91■□□□□ 0.94
GCOM1-210ENST00000488175 KIAA1210Q9ULL0 1709 aa20.9■□□□□ 0.94
GCOM1-210ENST00000488175 TBC1D32Q96NH3 1257 aa20.9■□□□□ 0.94
GCOM1-210ENST00000488175 VWDEQ8N2E2 1590 aa20.89■□□□□ 0.94
GCOM1-210ENST00000488175 FANCAO15360 1455 aa20.89■□□□□ 0.94
GCOM1-210ENST00000488175 TBC1D2Q9BYX2 928 aa20.89■□□□□ 0.93
GCOM1-210ENST00000488175 RWDD1Q9H446 243 aaPredicted RBP20.89■□□□□ 0.93
GCOM1-210ENST00000488175 ANTXR1Q9H6X2 564 aa20.89■□□□□ 0.93
GCOM1-210ENST00000488175 SBNO2Q9Y2G9 1366 aa20.89■□□□□ 0.93
GCOM1-210ENST00000488175 U2AF1L5P0DN76 240 aaPredicted RBP20.89■□□□□ 0.93
GCOM1-210ENST00000488175 U2AF1Q01081 240 aaKnown RBP eCLIP20.89■□□□□ 0.93
GCOM1-210ENST00000488175 UHRF1BP1LA0JNW5 1464 aa20.88■□□□□ 0.93
GCOM1-210ENST00000488175 PRKCSHP14314 528 aaPredicted RBP20.87■□□□□ 0.93
GCOM1-210ENST00000488175 CFAP53Q96M91 514 aa20.87■□□□□ 0.93
GCOM1-210ENST00000488175 NUTM2DQ5VT03 806 aaPredicted RBP20.87■□□□□ 0.93
GCOM1-210ENST00000488175 TSR2Q969E8 191 aaKnown RBP20.87■□□□□ 0.93
GCOM1-210ENST00000488175 IQSEC2Q5JU85 1478 aa20.85■□□□□ 0.93
GCOM1-210ENST00000488175 AAMPQ13685 434 aa20.85■□□□□ 0.93
GCOM1-210ENST00000488175 MVPQ14764 893 aaKnown RBP20.85■□□□□ 0.93
GCOM1-210ENST00000488175 MYH16Q9H6N6 1097 aa20.85■□□□□ 0.93
GCOM1-210ENST00000488175 C14orf93Q9H972 538 aaKnown RBP20.85■□□□□ 0.93
GCOM1-210ENST00000488175 FTSJ3Q8IY81 847 aaKnown RBP20.85■□□□□ 0.93
GCOM1-210ENST00000488175 ARXQ96QS3 562 aa20.84■□□□□ 0.93
GCOM1-210ENST00000488175 SHPRHQ149N8 1683 aa20.84■□□□□ 0.93
GCOM1-210ENST00000488175 ADGRL1O94910 1474 aa20.84■□□□□ 0.93
GCOM1-210ENST00000488175 CCDC27Q2M243 656 aa20.84■□□□□ 0.93
GCOM1-210ENST00000488175 SENP3Q9H4L4 574 aaPredicted RBP20.84■□□□□ 0.93
GCOM1-210ENST00000488175 NRXN1Q9ULB1 1477 aa20.83■□□□□ 0.92
GCOM1-210ENST00000488175 ZKSCAN2Q63HK3 967 aa20.83■□□□□ 0.92
GCOM1-210ENST00000488175 MROH1Q8NDA8 1641 aa20.82■□□□□ 0.92
GCOM1-210ENST00000488175 DZIP1LQ8IYY4 767 aaKnown RBP20.82■□□□□ 0.92
GCOM1-210ENST00000488175 ZNF518AQ6AHZ1 1483 aa20.82■□□□□ 0.92
GCOM1-210ENST00000488175 GGT6Q6P531 493 aa20.82■□□□□ 0.92
GCOM1-210ENST00000488175 NEURL4Q96JN8 1562 aa20.82■□□□□ 0.92
GCOM1-210ENST00000488175 INO80Q9ULG1 1556 aaPredicted RBP20.82■□□□□ 0.92
GCOM1-210ENST00000488175 SAFB2Q14151 953 aaKnown RBP eCLIP20.81■□□□□ 0.92
GCOM1-210ENST00000488175 VIRMAQ69YN4 1812 aaKnown RBP20.81■□□□□ 0.92
GCOM1-210ENST00000488175 ARAP3Q8WWN8 1544 aa20.81■□□□□ 0.92
GCOM1-210ENST00000488175 MROH2AA6NES4 1674 aa20.8■□□□□ 0.92
GCOM1-210ENST00000488175 EIF5BO60841 1220 aaKnown RBP20.8■□□□□ 0.92
GCOM1-210ENST00000488175 MFAP1P55081 439 aaKnown RBP20.8■□□□□ 0.92
GCOM1-210ENST00000488175 CABP2Q9NPB3 220 aa20.8■□□□□ 0.92
GCOM1-210ENST00000488175 SMC4Q9NTJ3 1288 aa20.8■□□□□ 0.92
GCOM1-210ENST00000488175 EXOSC9Q06265 439 aaKnown RBP20.79■□□□□ 0.92
GCOM1-210ENST00000488175 EFCAB6Q5THR3 1501 aa20.79■□□□□ 0.92
GCOM1-210ENST00000488175 U2SURPO15042 1029 aaKnown RBP20.79■□□□□ 0.92
GCOM1-210ENST00000488175 FAM43AQ8N2R8 423 aa20.79■□□□□ 0.92
GCOM1-210ENST00000488175 KIF1BO60333 1816 aa20.78■□□□□ 0.92
GCOM1-210ENST00000488175 MYO3AQ8NEV4 1616 aa20.77■□□□□ 0.92
GCOM1-210ENST00000488175 TRIM27P14373 513 aa20.77■□□□□ 0.92
GCOM1-210ENST00000488175 ITPRIPQ8IWB1 547 aa20.77■□□□□ 0.92
GCOM1-210ENST00000488175 C22orf23Q9BZE7 217 aa20.77■□□□□ 0.92
GCOM1-210ENST00000488175 GZF1Q9H116 711 aaPredicted RBP20.76■□□□□ 0.91
GCOM1-210ENST00000488175 SSH1Q8WYL5 1049 aa20.76■□□□□ 0.91
GCOM1-210ENST00000488175 PPRC1Q5VV67 1664 aaKnown RBP20.76■□□□□ 0.91
GCOM1-210ENST00000488175 EVC2Q86UK5 1308 aa20.74■□□□□ 0.91
GCOM1-210ENST00000488175 ZMYM3Q14202 1370 aa20.74■□□□□ 0.91
GCOM1-210ENST00000488175 GGNBP2Q9H3C7 697 aa20.74■□□□□ 0.91
GCOM1-210ENST00000488175 IFT172Q9UG01 1749 aa20.74■□□□□ 0.91
GCOM1-210ENST00000488175 ADGRB3O60242 1522 aa20.73■□□□□ 0.91
GCOM1-210ENST00000488175 NOB1Q9ULX3 412 aaKnown RBP20.73■□□□□ 0.91
GCOM1-210ENST00000488175 NPATQ14207 1427 aa20.73■□□□□ 0.91
GCOM1-210ENST00000488175 ADGRB1O14514 1584 aa20.73■□□□□ 0.91
GCOM1-210ENST00000488175 TMPOP42166 694 aaKnown RBP20.73■□□□□ 0.91
GCOM1-210ENST00000488175 TRIM35Q9UPQ4 493 aa20.73■□□□□ 0.91
GCOM1-210ENST00000488175 SETBP1Q9Y6X0 1596 aa20.73■□□□□ 0.91
GCOM1-210ENST00000488175 ABCA9Q8IUA7 1624 aa20.72■□□□□ 0.91
GCOM1-210ENST00000488175 MCM4P33991 863 aa20.72■□□□□ 0.91
GCOM1-210ENST00000488175 L1TD1Q5T7N2 865 aaKnown RBP20.72■□□□□ 0.91
GCOM1-210ENST00000488175 ANKRD36BQ8N2N9 1353 aa20.71■□□□□ 0.91
GCOM1-210ENST00000488175 PLEKHF1Q96S99 279 aa20.71■□□□□ 0.91
GCOM1-210ENST00000488175 QRICH2Q9H0J4 1663 aa20.71■□□□□ 0.91
GCOM1-210ENST00000488175 ATF7IPQ6VMQ6 1270 aa20.71■□□□□ 0.91
GCOM1-210ENST00000488175 TMEM57Q8N5G2 664 aa20.7■□□□□ 0.9
GCOM1-210ENST00000488175 RRAGDQ9NQL2 400 aaPredicted RBP20.7■□□□□ 0.9
GCOM1-210ENST00000488175 STK26Q9P289 416 aa20.7■□□□□ 0.9
GCOM1-210ENST00000488175 HDAC1Q13547 482 aaPredicted RBP20.7■□□□□ 0.9
GCOM1-210ENST00000488175 DDX19BQ9UMR2 479 aa20.7■□□□□ 0.9
GCOM1-210ENST00000488175 CD109Q6YHK3 1445 aa20.69■□□□□ 0.9
GCOM1-210ENST00000488175 XRCC6P12956 609 aaKnown RBP eCLIP20.69■□□□□ 0.9
GCOM1-210ENST00000488175 CFAP65Q6ZU64 1925 aaKnown RBP20.69■□□□□ 0.9
GCOM1-210ENST00000488175 SRPK2P78362 688 aaKnown RBP20.68■□□□□ 0.9
GCOM1-210ENST00000488175 CT47B1P0C2W7 299 aaPredicted RBP20.68■□□□□ 0.9
GCOM1-210ENST00000488175 NCBP3Q53F19 620 aaKnown RBP20.67■□□□□ 0.9
GCOM1-210ENST00000488175 CHMP5Q9NZZ3 219 aa20.67■□□□□ 0.9
GCOM1-210ENST00000488175 GOLGA6L3A6NEY3 463 aa20.67■□□□□ 0.9
GCOM1-210ENST00000488175 RIPK4P57078 832 aa20.67■□□□□ 0.9
GCOM1-210ENST00000488175 RPGRIP1LQ68CZ1 1315 aa20.66■□□□□ 0.9
GCOM1-210ENST00000488175 LMTK2Q8IWU2 1503 aa20.66■□□□□ 0.9
GCOM1-210ENST00000488175 PANK2Q9BZ23 570 aa20.66■□□□□ 0.9
GCOM1-210ENST00000488175 SMC5Q8IY18 1101 aa20.65■□□□□ 0.9
GCOM1-210ENST00000488175 A0A1W2PP64 1363 aa20.65■□□□□ 0.9
GCOM1-210ENST00000488175 NSD2O96028 1365 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms