RNA–Protein interactions for RNA: ENST00000488149.5

MCF2L2-212, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 7,813 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-212ENST00000488149 PDCP20941 246 aa9.95□□□□□ -0.82
MCF2L2-212ENST00000488149 GNAI1P63096 354 aa9.95□□□□□ -0.82
MCF2L2-212ENST00000488149 ZSCAN30Q86W11 494 aa9.94□□□□□ -0.82
MCF2L2-212ENST00000488149 SDF4Q9BRK5 362 aa9.94□□□□□ -0.82
MCF2L2-212ENST00000488149 C9orf78Q9NZ63 289 aaPredicted RBP9.94□□□□□ -0.82
MCF2L2-212ENST00000488149 ADAMTS8Q9UP79 889 aa9.94□□□□□ -0.82
MCF2L2-212ENST00000488149 ERCC6Q03468 1493 aa9.94□□□□□ -0.82
MCF2L2-212ENST00000488149 RRP12Q5JTH9 1297 aaKnown RBP9.94□□□□□ -0.82
MCF2L2-212ENST00000488149 OLFM4Q6UX06 510 aa9.94□□□□□ -0.82
MCF2L2-212ENST00000488149 NCBP3Q53F19 620 aaKnown RBP9.94□□□□□ -0.82
MCF2L2-212ENST00000488149 CCDC112Q8NEF3 446 aa9.94□□□□□ -0.82
MCF2L2-212ENST00000488149 COG3Q96JB2 828 aa9.94□□□□□ -0.82
MCF2L2-212ENST00000488149 DCTN1Q14203 1278 aa9.94□□□□□ -0.82
MCF2L2-212ENST00000488149 WASHC2CQ9Y4E1 1318 aa9.94□□□□□ -0.82
MCF2L2-212ENST00000488149 FGD6Q6ZV73 1430 aa9.94□□□□□ -0.82
MCF2L2-212ENST00000488149 CUX1P39880 1505 aa9.93□□□□□ -0.82
MCF2L2-212ENST00000488149 NEK4P51957 841 aa9.93□□□□□ -0.82
MCF2L2-212ENST00000488149 NEXNQ0ZGT2 675 aa9.93□□□□□ -0.82
MCF2L2-212ENST00000488149 TDRD9Q8NDG6 1382 aaKnown RBP9.93□□□□□ -0.82
MCF2L2-212ENST00000488149 MLECQ14165 292 aa9.93□□□□□ -0.82
MCF2L2-212ENST00000488149 K7ELQ4 463 aaPredicted RBP9.93□□□□□ -0.82
MCF2L2-212ENST00000488149 PSMA5P28066 241 aa9.93□□□□□ -0.82
MCF2L2-212ENST00000488149 TRDNQ13061 729 aa9.93□□□□□ -0.82
MCF2L2-212ENST00000488149 CCDC191Q8NCU4 936 aa9.93□□□□□ -0.82
MCF2L2-212ENST00000488149 FBXW7Q969H0 707 aa9.93□□□□□ -0.82
MCF2L2-212ENST00000488149 KINO60870 393 aaKnown RBP9.92□□□□□ -0.82
MCF2L2-212ENST00000488149 CCDC192P0DO97 292 aa9.92□□□□□ -0.82
MCF2L2-212ENST00000488149 NGDNQ8NEJ9 315 aaKnown RBP9.92□□□□□ -0.82
MCF2L2-212ENST00000488149 STAC3Q96MF2 364 aa9.92□□□□□ -0.82
MCF2L2-212ENST00000488149 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.92□□□□□ -0.82
MCF2L2-212ENST00000488149 PDCL2Q8N4E4 241 aa9.92□□□□□ -0.82
MCF2L2-212ENST00000488149 GCC1Q96CN9 775 aa9.92□□□□□ -0.82
MCF2L2-212ENST00000488149 BCL11BQ9C0K0 894 aaPredicted RBP9.92□□□□□ -0.82
MCF2L2-212ENST00000488149 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.91□□□□□ -0.82
MCF2L2-212ENST00000488149 MYOM3Q5VTT5 1437 aa9.91□□□□□ -0.82
MCF2L2-212ENST00000488149 G3BP1Q13283 466 aaKnown RBP eCLIP9.91□□□□□ -0.82
MCF2L2-212ENST00000488149 FKBP5Q13451 457 aaPredicted RBP9.91□□□□□ -0.82
MCF2L2-212ENST00000488149 SAFBQ15424 915 aaKnown RBP eCLIP9.91□□□□□ -0.82
MCF2L2-212ENST00000488149 PDCL3Q9H2J4 239 aa9.91□□□□□ -0.82
MCF2L2-212ENST00000488149 PDILTQ8N807 584 aa9.91□□□□□ -0.82
MCF2L2-212ENST00000488149 SPC24Q8NBT2 197 aa9.91□□□□□ -0.82
MCF2L2-212ENST00000488149 VGFO15240 615 aaPredicted RBP9.9□□□□□ -0.82
MCF2L2-212ENST00000488149 PNISRQ8TF01 805 aaKnown RBP9.9□□□□□ -0.82
MCF2L2-212ENST00000488149 UBE2Q2Q8WVN8 375 aa9.9□□□□□ -0.82
MCF2L2-212ENST00000488149 KIF21BO75037 1637 aa9.9□□□□□ -0.82
MCF2L2-212ENST00000488149 TEFQ10587 303 aa9.9□□□□□ -0.82
MCF2L2-212ENST00000488149 CCDC9Q9Y3X0 531 aaKnown RBP9.9□□□□□ -0.82
MCF2L2-212ENST00000488149 WDR33Q9C0J8 1336 aaKnown RBP9.9□□□□□ -0.82
MCF2L2-212ENST00000488149 SMC2O95347 1197 aa9.9□□□□□ -0.83
MCF2L2-212ENST00000488149 CAGE1Q8TC20 777 aa9.9□□□□□ -0.83
MCF2L2-212ENST00000488149 FIBPO43427 364 aa9.9□□□□□ -0.83
MCF2L2-212ENST00000488149 CCDC27Q2M243 656 aa9.9□□□□□ -0.83
MCF2L2-212ENST00000488149 CNTROBQ8N137 903 aa9.89□□□□□ -0.83
MCF2L2-212ENST00000488149 LTV1Q96GA3 475 aaPredicted RBP9.89□□□□□ -0.83
MCF2L2-212ENST00000488149 LRRC9Q6ZRR7 1453 aa9.89□□□□□ -0.83
MCF2L2-212ENST00000488149 NAP1L1P55209 391 aaKnown RBP9.89□□□□□ -0.83
MCF2L2-212ENST00000488149 RRBP1Q9P2E9 1410 aaKnown RBP9.88□□□□□ -0.83
MCF2L2-212ENST00000488149 DDX58O95786 925 aaKnown RBP9.88□□□□□ -0.83
MCF2L2-212ENST00000488149 NUTM2DQ5VT03 806 aaPredicted RBP9.88□□□□□ -0.83
MCF2L2-212ENST00000488149 EIF3JO75822 258 aaKnown RBP9.88□□□□□ -0.83
MCF2L2-212ENST00000488149 TCP11L2Q8N4U5 519 aa9.88□□□□□ -0.83
MCF2L2-212ENST00000488149 USP8P40818 1118 aa9.88□□□□□ -0.83
MCF2L2-212ENST00000488149 SMARCE1Q969G3 411 aa9.88□□□□□ -0.83
MCF2L2-212ENST00000488149 C1orf141Q5JVX7 400 aa9.88□□□□□ -0.83
MCF2L2-212ENST00000488149 TSPYL1Q9H0U9 437 aa9.88□□□□□ -0.83
MCF2L2-212ENST00000488149 VPS53Q5VIR6 699 aa9.87□□□□□ -0.83
MCF2L2-212ENST00000488149 PDS5BQ9NTI5 1447 aa9.87□□□□□ -0.83
MCF2L2-212ENST00000488149 AXDND1Q5T1B0 1012 aaPredicted RBP9.87□□□□□ -0.83
MCF2L2-212ENST00000488149 NFXL1Q6ZNB6 911 aa9.87□□□□□ -0.83
MCF2L2-212ENST00000488149 AEBP1Q8IUX7 1158 aa9.87□□□□□ -0.83
MCF2L2-212ENST00000488149 ERLIN1O75477 346 aa9.87□□□□□ -0.83
MCF2L2-212ENST00000488149 CT47B1P0C2W7 299 aaPredicted RBP9.87□□□□□ -0.83
MCF2L2-212ENST00000488149 EIF2S2P20042 333 aaKnown RBP9.87□□□□□ -0.83
MCF2L2-212ENST00000488149 PPP2R1AP30153 589 aa9.87□□□□□ -0.83
MCF2L2-212ENST00000488149 RALYLQ86SE5 291 aaKnown RBP9.87□□□□□ -0.83
MCF2L2-212ENST00000488149 ZNF396Q96N95 335 aaPredicted RBP9.87□□□□□ -0.83
MCF2L2-212ENST00000488149 FOSBP53539 338 aa9.86□□□□□ -0.83
MCF2L2-212ENST00000488149 FILIP1LQ4L180 1135 aa9.86□□□□□ -0.83
MCF2L2-212ENST00000488149 TNMDQ9H2S6 317 aa9.86□□□□□ -0.83
MCF2L2-212ENST00000488149 MYO6Q9UM54 1294 aa9.86□□□□□ -0.83
MCF2L2-212ENST00000488149 ERICH2A1L162 156 aa9.86□□□□□ -0.83
MCF2L2-212ENST00000488149 KIAA0754O94854 1291 aa9.86□□□□□ -0.83
MCF2L2-212ENST00000488149 GNAI3P08754 354 aa9.86□□□□□ -0.83
MCF2L2-212ENST00000488149 UBTFL1P0CB47 393 aaPredicted RBP9.86□□□□□ -0.83
MCF2L2-212ENST00000488149 BCAR3O75815 825 aa9.85□□□□□ -0.83
MCF2L2-212ENST00000488149 KRT85P78386 507 aa9.85□□□□□ -0.83
MCF2L2-212ENST00000488149 DEF6Q9H4E7 631 aa9.85□□□□□ -0.83
MCF2L2-212ENST00000488149 HIP1O00291 1037 aa9.85□□□□□ -0.83
MCF2L2-212ENST00000488149 FMNL2Q96PY5 1086 aa9.85□□□□□ -0.83
MCF2L2-212ENST00000488149 TMX4Q9H1E5 349 aaPredicted RBP9.85□□□□□ -0.83
MCF2L2-212ENST00000488149 TSPYL4Q9UJ04 414 aa9.85□□□□□ -0.83
MCF2L2-212ENST00000488149 CLASRPQ8N2M8 674 aaKnown RBP9.85□□□□□ -0.83
MCF2L2-212ENST00000488149 PDIA4P13667 645 aaKnown RBP9.84□□□□□ -0.83
MCF2L2-212ENST00000488149 TTLL5Q6EMB2 1281 aa9.84□□□□□ -0.83
MCF2L2-212ENST00000488149 MVPQ14764 893 aaKnown RBP9.84□□□□□ -0.83
MCF2L2-212ENST00000488149 NECTIN2Q92692 538 aa9.84□□□□□ -0.83
MCF2L2-212ENST00000488149 MINK1Q8N4C8 1332 aaPredicted RBP9.84□□□□□ -0.83
MCF2L2-212ENST00000488149 KIF2AO00139 706 aaPredicted RBP9.84□□□□□ -0.83
MCF2L2-212ENST00000488149 SCAPERQ9BY12 1400 aa9.84□□□□□ -0.83
MCF2L2-212ENST00000488149 PIP4K2AP48426 406 aaPredicted RBP9.84□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms