RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 ARHGEF5Q12774 1597 aa12.06□□□□□ -0.48
NECTIN3-209ENST00000488016 MIA2Q96PC5 1412 aa12.06□□□□□ -0.48
NECTIN3-209ENST00000488016 PSDA5PKW4 1024 aaPredicted RBP12.06□□□□□ -0.48
NECTIN3-209ENST00000488016 UPF1Q92900 1129 aaKnown RBP eCLIP12.06□□□□□ -0.48
NECTIN3-209ENST00000488016 ADGBQ8N7X0 1667 aa12.05□□□□□ -0.48
NECTIN3-209ENST00000488016 TCOF1Q13428 1488 aaKnown RBP12.04□□□□□ -0.48
NECTIN3-209ENST00000488016 FAM50AQ14320 339 aaKnown RBP12.04□□□□□ -0.48
NECTIN3-209ENST00000488016 OXER1Q8TDS5 423 aa12.04□□□□□ -0.48
NECTIN3-209ENST00000488016 REREQ9P2R6 1566 aa12.04□□□□□ -0.48
NECTIN3-209ENST00000488016 ABCC5O15440 1437 aa12.03□□□□□ -0.48
NECTIN3-209ENST00000488016 MFSD10Q14728 455 aa12.03□□□□□ -0.48
NECTIN3-209ENST00000488016 CADPS2Q86UW7 1296 aa12.03□□□□□ -0.48
NECTIN3-209ENST00000488016 PLXNC1O60486 1568 aa12.03□□□□□ -0.48
NECTIN3-209ENST00000488016 FER1L4A9Z1Z3 1794 aa12.02□□□□□ -0.48
NECTIN3-209ENST00000488016 A2MP01023 1474 aa12.02□□□□□ -0.48
NECTIN3-209ENST00000488016 CHIC2Q9UKJ5 165 aa12.02□□□□□ -0.49
NECTIN3-209ENST00000488016 CROCC2H7BZ55 1655 aa12.02□□□□□ -0.49
NECTIN3-209ENST00000488016 DAPK1P53355 1430 aa12.02□□□□□ -0.49
NECTIN3-209ENST00000488016 DNMT1P26358 1616 aaKnown RBP12.01□□□□□ -0.49
NECTIN3-209ENST00000488016 MMRN1Q13201 1228 aa12.01□□□□□ -0.49
NECTIN3-209ENST00000488016 RTEL1-TNFRSF6BF6WH68 1400 aa12.01□□□□□ -0.49
NECTIN3-209ENST00000488016 SPATA31D1Q6ZQQ2 1576 aa12.01□□□□□ -0.49
NECTIN3-209ENST00000488016 PBX2P40425 430 aa12□□□□□ -0.49
NECTIN3-209ENST00000488016 PAXIP1Q6ZW49 1069 aaPredicted RBP12□□□□□ -0.49
NECTIN3-209ENST00000488016 CFAP44Q96MT7 982 aa12□□□□□ -0.49
NECTIN3-209ENST00000488016 AGLP35573 1532 aa12□□□□□ -0.49
NECTIN3-209ENST00000488016 MAST1Q9Y2H9 1570 aa12□□□□□ -0.49
NECTIN3-209ENST00000488016 CEBPAP49715 358 aaPredicted RBP11.99□□□□□ -0.49
NECTIN3-209ENST00000488016 PTPRKQ15262 1439 aa11.99□□□□□ -0.49
NECTIN3-209ENST00000488016 TSPY4P0CV99 314 aa11.98□□□□□ -0.49
NECTIN3-209ENST00000488016 TSPY10P0CW01 314 aa11.98□□□□□ -0.49
NECTIN3-209ENST00000488016 DHX29Q7Z478 1369 aaKnown RBP11.97□□□□□ -0.49
NECTIN3-209ENST00000488016 ITGAEP38570 1179 aa11.97□□□□□ -0.49
NECTIN3-209ENST00000488016 GGT6Q6P531 493 aa11.97□□□□□ -0.49
NECTIN3-209ENST00000488016 SHANK2Q9UPX8 1470 aa11.96□□□□□ -0.49
NECTIN3-209ENST00000488016 PPP4R3BQ5MIZ7 849 aa11.96□□□□□ -0.49
NECTIN3-209ENST00000488016 RSPH4AQ5TD94 716 aa11.96□□□□□ -0.49
NECTIN3-209ENST00000488016 RRP7BPQ9NSQ0 103 aa11.96□□□□□ -0.49
NECTIN3-209ENST00000488016 KIF15Q9NS87 1388 aa11.95□□□□□ -0.5
NECTIN3-209ENST00000488016 CLTCQ00610 1675 aaKnown RBP11.95□□□□□ -0.5
NECTIN3-209ENST00000488016 KIF3BO15066 747 aa11.95□□□□□ -0.5
NECTIN3-209ENST00000488016 ANKRD13DQ6ZTN6 518 aa11.94□□□□□ -0.5
NECTIN3-209ENST00000488016 MAP3K9P80192 1104 aa11.93□□□□□ -0.5
NECTIN3-209ENST00000488016 LSM11P83369 360 aaKnown RBP eCLIP11.93□□□□□ -0.5
NECTIN3-209ENST00000488016 C3P01024 1663 aa11.93□□□□□ -0.5
NECTIN3-209ENST00000488016 MROH1Q8NDA8 1641 aa11.92□□□□□ -0.5
NECTIN3-209ENST00000488016 RRBP1Q9P2E9 1410 aaKnown RBP11.92□□□□□ -0.5
NECTIN3-209ENST00000488016 ARHGAP33O14559 1287 aa11.91□□□□□ -0.5
NECTIN3-209ENST00000488016 AXIN2Q9Y2T1 843 aa11.91□□□□□ -0.5
NECTIN3-209ENST00000488016 NCOA1Q15788 1441 aa11.91□□□□□ -0.5
NECTIN3-209ENST00000488016 DUOX2Q9NRD8 1548 aa11.91□□□□□ -0.5
NECTIN3-209ENST00000488016 EVI5O60447 810 aa11.9□□□□□ -0.5
NECTIN3-209ENST00000488016 RNF17Q9BXT8 1623 aaKnown RBP11.89□□□□□ -0.51
NECTIN3-209ENST00000488016 ADGRL2O95490 1459 aa11.89□□□□□ -0.51
NECTIN3-209ENST00000488016 PTGER2P43116 358 aa11.89□□□□□ -0.51
NECTIN3-209ENST00000488016 ZNF454Q8N9F8 522 aa11.89□□□□□ -0.51
NECTIN3-209ENST00000488016 ESF1Q9H501 851 aaKnown RBP11.89□□□□□ -0.51
NECTIN3-209ENST00000488016 EMILIN3Q9NT22 766 aa11.89□□□□□ -0.51
NECTIN3-209ENST00000488016 ANKRD30AQ9BXX3 1397 aa11.89□□□□□ -0.51
NECTIN3-209ENST00000488016 POTEEQ6S8J3 1075 aa11.88□□□□□ -0.51
NECTIN3-209ENST00000488016 EIF2AK4Q9P2K8 1649 aaKnown RBP11.88□□□□□ -0.51
NECTIN3-209ENST00000488016 CEP152O94986 1710 aa11.88□□□□□ -0.51
NECTIN3-209ENST00000488016 ZMYM3Q14202 1370 aa11.87□□□□□ -0.51
NECTIN3-209ENST00000488016 ERBINQ96RT1 1412 aa11.86□□□□□ -0.51
NECTIN3-209ENST00000488016 ABCC3O15438 1527 aa11.86□□□□□ -0.51
NECTIN3-209ENST00000488016 KDM5DQ9BY66 1539 aa11.86□□□□□ -0.51
NECTIN3-209ENST00000488016 MROH2AA6NES4 1674 aa11.86□□□□□ -0.51
NECTIN3-209ENST00000488016 CNTLNQ9NXG0 1405 aa11.86□□□□□ -0.51
NECTIN3-209ENST00000488016 FBXO31Q5XUX0 539 aaPredicted RBP11.85□□□□□ -0.51
NECTIN3-209ENST00000488016 RNF166Q96A37 237 aaPredicted RBP11.85□□□□□ -0.51
NECTIN3-209ENST00000488016 ANO8Q9HCE9 1232 aaPredicted RBP11.85□□□□□ -0.51
NECTIN3-209ENST00000488016 WASHC2CQ9Y4E1 1318 aa11.85□□□□□ -0.51
NECTIN3-209ENST00000488016 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.84□□□□□ -0.51
NECTIN3-209ENST00000488016 CAMK2BQ13554 666 aa11.84□□□□□ -0.51
NECTIN3-209ENST00000488016 DEPDC5O75140 1603 aa11.84□□□□□ -0.51
NECTIN3-209ENST00000488016 PRDM15P57071 1507 aaPredicted RBP11.84□□□□□ -0.51
NECTIN3-209ENST00000488016 STRCQ7RTU9 1775 aa11.84□□□□□ -0.51
NECTIN3-209ENST00000488016 ANKRD50Q9ULJ7 1429 aa11.84□□□□□ -0.51
NECTIN3-209ENST00000488016 FOSBP53539 338 aa11.83□□□□□ -0.52
NECTIN3-209ENST00000488016 PREX1Q8TCU6 1659 aa11.83□□□□□ -0.52
NECTIN3-209ENST00000488016 CAMSAP1Q5T5Y3 1602 aa11.82□□□□□ -0.52
NECTIN3-209ENST00000488016 PSEN2P49810 448 aa11.82□□□□□ -0.52
NECTIN3-209ENST00000488016 KCNK17Q96T54 332 aa11.82□□□□□ -0.52
NECTIN3-209ENST00000488016 WDR70Q9NW82 654 aa11.82□□□□□ -0.52
NECTIN3-209ENST00000488016 ROCK1Q13464 1354 aa11.81□□□□□ -0.52
NECTIN3-209ENST00000488016 MYO3AQ8NEV4 1616 aa11.81□□□□□ -0.52
NECTIN3-209ENST00000488016 CFAP65Q6ZU64 1925 aaKnown RBP11.8□□□□□ -0.52
NECTIN3-209ENST00000488016 DPYSL4O14531 572 aa11.8□□□□□ -0.52
NECTIN3-209ENST00000488016 PZPP20742 1482 aa11.8□□□□□ -0.52
NECTIN3-209ENST00000488016 ZC3H13Q5T200 1668 aaKnown RBP11.8□□□□□ -0.52
NECTIN3-209ENST00000488016 VWDEQ8N2E2 1590 aa11.79□□□□□ -0.52
NECTIN3-209ENST00000488016 UHRF1BP1Q6BDS2 1440 aa11.79□□□□□ -0.52
NECTIN3-209ENST00000488016 DMRTA1Q5VZB9 504 aa11.79□□□□□ -0.52
NECTIN3-209ENST00000488016 ADGRD1Q6QNK2 874 aa11.79□□□□□ -0.52
NECTIN3-209ENST00000488016 BCL2L12Q9HB09 334 aa11.79□□□□□ -0.52
NECTIN3-209ENST00000488016 NAIPQ13075 1403 aa11.78□□□□□ -0.52
NECTIN3-209ENST00000488016 TK2O00142 265 aa11.78□□□□□ -0.52
NECTIN3-209ENST00000488016 PTPREP23469 700 aa11.78□□□□□ -0.52
NECTIN3-209ENST00000488016 ZDHHC16Q969W1 377 aa11.78□□□□□ -0.52
NECTIN3-209ENST00000488016 UNC13BO14795 1591 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms