RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 MINK1Q8N4C8 1332 aaPredicted RBP19.74■□□□□ 0.75
NUP188-207ENST00000487952 ADGRL3Q9HAR2 1447 aa19.71■□□□□ 0.75
NUP188-207ENST00000487952 SLC24A1O60721 1099 aa19.71■□□□□ 0.75
NUP188-207ENST00000487952 MSH6P52701 1360 aa19.7■□□□□ 0.74
NUP188-207ENST00000487952 HIRIP3Q9BW71 556 aaPredicted RBP19.7■□□□□ 0.74
NUP188-207ENST00000487952 QRICH2Q9H0J4 1663 aa19.69■□□□□ 0.74
NUP188-207ENST00000487952 C19orf44Q9H6X5 657 aa19.68■□□□□ 0.74
NUP188-207ENST00000487952 SBNO2Q9Y2G9 1366 aa19.68■□□□□ 0.74
NUP188-207ENST00000487952 EVC2Q86UK5 1308 aa19.67■□□□□ 0.74
NUP188-207ENST00000487952 ATF3P18847 181 aa19.66■□□□□ 0.74
NUP188-207ENST00000487952 TMF1P82094 1093 aa19.66■□□□□ 0.74
NUP188-207ENST00000487952 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.65■□□□□ 0.74
NUP188-207ENST00000487952 TESK2Q96S53 571 aa19.65■□□□□ 0.74
NUP188-207ENST00000487952 WASLO00401 505 aaPredicted RBP19.64■□□□□ 0.73
NUP188-207ENST00000487952 CADPS2Q86UW7 1296 aa19.64■□□□□ 0.73
NUP188-207ENST00000487952 CERKQ8TCT0 537 aa19.64■□□□□ 0.73
NUP188-207ENST00000487952 DCCP43146 1447 aa19.64■□□□□ 0.73
NUP188-207ENST00000487952 NALCNQ8IZF0 1738 aa19.64■□□□□ 0.73
NUP188-207ENST00000487952 ADGRB2O60241 1585 aa19.63■□□□□ 0.73
NUP188-207ENST00000487952 SRPK2P78362 688 aaKnown RBP19.63■□□□□ 0.73
NUP188-207ENST00000487952 CDC42BPGQ6DT37 1551 aa19.62■□□□□ 0.73
NUP188-207ENST00000487952 CDK19Q9BWU1 502 aa19.62■□□□□ 0.73
NUP188-207ENST00000487952 IQSEC2Q5JU85 1478 aa19.61■□□□□ 0.73
NUP188-207ENST00000487952 CDCA8Q53HL2 280 aa19.61■□□□□ 0.73
NUP188-207ENST00000487952 XIRP1Q702N8 1843 aaKnown RBP19.6■□□□□ 0.73
NUP188-207ENST00000487952 TULP4Q9NRJ4 1543 aa19.6■□□□□ 0.73
NUP188-207ENST00000487952 NUTM2FA1L443 756 aa19.59■□□□□ 0.73
NUP188-207ENST00000487952 POLR3GLQ9BT43 218 aa19.58■□□□□ 0.72
NUP188-207ENST00000487952 CABP2Q9NPB3 220 aa19.58■□□□□ 0.72
NUP188-207ENST00000487952 DISP3Q9P2K9 1392 aa19.57■□□□□ 0.72
NUP188-207ENST00000487952 TOM1O60784 492 aa19.56■□□□□ 0.72
NUP188-207ENST00000487952 ANKARQ7Z5J8 1434 aa19.56■□□□□ 0.72
NUP188-207ENST00000487952 ATAD2Q6PL18 1390 aa19.56■□□□□ 0.72
NUP188-207ENST00000487952 PUS7Q96PZ0 661 aaKnown RBP19.55■□□□□ 0.72
NUP188-207ENST00000487952 FMN2Q9NZ56 1722 aa19.54■□□□□ 0.72
NUP188-207ENST00000487952 UBAP1LF5GYI3 381 aa19.54■□□□□ 0.72
NUP188-207ENST00000487952 NUDT16Q96DE0 195 aaKnown RBP19.54■□□□□ 0.72
NUP188-207ENST00000487952 MST1RQ04912 1400 aa19.53■□□□□ 0.72
NUP188-207ENST00000487952 SLAIN2Q9P270 581 aa19.53■□□□□ 0.72
NUP188-207ENST00000487952 CCDC61Q9Y6R9 512 aa19.52■□□□□ 0.72
NUP188-207ENST00000487952 C1orf167Q5SNV9 1468 aa19.52■□□□□ 0.72
NUP188-207ENST00000487952 PRR36Q9H6K5 1346 aa19.51■□□□□ 0.71
NUP188-207ENST00000487952 ESCO1Q5FWF5 840 aa19.51■□□□□ 0.71
NUP188-207ENST00000487952 TMC1Q8TDI8 760 aa19.51■□□□□ 0.71
NUP188-207ENST00000487952 ATP7BP35670 1465 aa19.51■□□□□ 0.71
NUP188-207ENST00000487952 KIF7Q2M1P5 1343 aa19.5■□□□□ 0.71
NUP188-207ENST00000487952 SCAF1Q9H7N4 1312 aaKnown RBP19.5■□□□□ 0.71
NUP188-207ENST00000487952 ZNF316A6NFI3 1004 aaPredicted RBP19.49■□□□□ 0.71
NUP188-207ENST00000487952 C11orf95C9JLR9 678 aaPredicted RBP19.49■□□□□ 0.71
NUP188-207ENST00000487952 CCDC7Q96M83 1385 aa19.48■□□□□ 0.71
NUP188-207ENST00000487952 PHF8Q9UPP1 1060 aa19.48■□□□□ 0.71
NUP188-207ENST00000487952 PPIP5K1Q6PFW1 1433 aa19.48■□□□□ 0.71
NUP188-207ENST00000487952 PIP4K2BP78356 416 aa19.47■□□□□ 0.71
NUP188-207ENST00000487952 ORAI2Q96SN7 254 aa19.47■□□□□ 0.71
NUP188-207ENST00000487952 NINLQ9Y2I6 1382 aa19.46■□□□□ 0.71
NUP188-207ENST00000487952 NGDNQ8NEJ9 315 aaKnown RBP19.46■□□□□ 0.71
NUP188-207ENST00000487952 PMFBP1Q8TBY8 1022 aa19.46■□□□□ 0.71
NUP188-207ENST00000487952 CABP1Q9NZU7 370 aa19.46■□□□□ 0.71
NUP188-207ENST00000487952 USP32Q8NFA0 1604 aa19.46■□□□□ 0.71
NUP188-207ENST00000487952 WASHC2AQ641Q2 1341 aa19.45■□□□□ 0.7
NUP188-207ENST00000487952 ITSN1Q15811 1721 aa19.45■□□□□ 0.7
NUP188-207ENST00000487952 PLEKHG3A1L390 1219 aa19.44■□□□□ 0.7
NUP188-207ENST00000487952 BRINP3Q76B58 766 aa19.44■□□□□ 0.7
NUP188-207ENST00000487952 HDGFL2Q7Z4V5 671 aaPredicted RBP19.43■□□□□ 0.7
NUP188-207ENST00000487952 SLC12A5Q9H2X9 1139 aa19.43■□□□□ 0.7
NUP188-207ENST00000487952 TERF2IPQ9NYB0 399 aa19.42■□□□□ 0.7
NUP188-207ENST00000487952 TOPAZ1Q8N9V7 1692 aa19.42■□□□□ 0.7
NUP188-207ENST00000487952 KIF1AQ12756 1690 aa19.41■□□□□ 0.7
NUP188-207ENST00000487952 ACEP12821 1306 aa19.41■□□□□ 0.7
NUP188-207ENST00000487952 RGPD8O14715 1765 aaPredicted RBP19.41■□□□□ 0.7
NUP188-207ENST00000487952 FOXO3O43524 673 aa19.4■□□□□ 0.7
NUP188-207ENST00000487952 NPHP3Q7Z494 1330 aa19.4■□□□□ 0.7
NUP188-207ENST00000487952 PSME1Q06323 249 aa19.39■□□□□ 0.69
NUP188-207ENST00000487952 POLR3AO14802 1390 aaPredicted RBP19.38■□□□□ 0.69
NUP188-207ENST00000487952 ANKRD36BQ8N2N9 1353 aa19.38■□□□□ 0.69
NUP188-207ENST00000487952 ZNF692Q9BU19 519 aaPredicted RBP19.38■□□□□ 0.69
NUP188-207ENST00000487952 ROBO1Q9Y6N7 1651 aa19.38■□□□□ 0.69
NUP188-207ENST00000487952 KTN1Q86UP2 1357 aaKnown RBP19.36■□□□□ 0.69
NUP188-207ENST00000487952 A0A1W2PP64 1363 aa19.35■□□□□ 0.69
NUP188-207ENST00000487952 KRT28Q7Z3Y7 464 aa19.35■□□□□ 0.69
NUP188-207ENST00000487952 DDX17Q92841 729 aaKnown RBP19.35■□□□□ 0.69
NUP188-207ENST00000487952 PANK3Q9H999 370 aa19.35■□□□□ 0.69
NUP188-207ENST00000487952 MYOM1P52179 1685 aa19.35■□□□□ 0.69
NUP188-207ENST00000487952 XPCQ01831 940 aaPredicted RBP19.34■□□□□ 0.69
NUP188-207ENST00000487952 CPSF1Q10570 1443 aaKnown RBP19.34■□□□□ 0.69
NUP188-207ENST00000487952 CD163L1Q9NR16 1453 aa19.33■□□□□ 0.68
NUP188-207ENST00000487952 USP6P35125 1406 aa19.33■□□□□ 0.68
NUP188-207ENST00000487952 PAK3O75914 559 aaPredicted RBP19.32■□□□□ 0.68
NUP188-207ENST00000487952 DDX10Q13206 875 aaKnown RBP19.32■□□□□ 0.68
NUP188-207ENST00000487952 BRD4O60885 1362 aaPredicted RBP19.32■□□□□ 0.68
NUP188-207ENST00000487952 FBXO41Q8TF61 875 aa19.31■□□□□ 0.68
NUP188-207ENST00000487952 AHDC1Q5TGY3 1603 aaPredicted RBP19.31■□□□□ 0.68
NUP188-207ENST00000487952 EDC4Q6P2E9 1401 aaKnown RBP19.31■□□□□ 0.68
NUP188-207ENST00000487952 NHSL1Q5SYE7 1610 aa19.29■□□□□ 0.68
NUP188-207ENST00000487952 SOS2Q07890 1332 aaPredicted RBP19.29■□□□□ 0.68
NUP188-207ENST00000487952 NSD3Q9BZ95 1437 aa19.29■□□□□ 0.68
NUP188-207ENST00000487952 LMOD2Q6P5Q4 547 aa19.29■□□□□ 0.68
NUP188-207ENST00000487952 KNSTRNQ9Y448 316 aa19.29■□□□□ 0.68
NUP188-207ENST00000487952 AKAP12Q02952 1782 aa19.29■□□□□ 0.68
NUP188-207ENST00000487952 PXDNQ92626 1479 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms