RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 PLA2G2CQ5R387 149 aa10.47□□□□□ -0.73
BRCA1-217ENST00000487825 LIAT1Q6ZQX7 453 aa10.46□□□□□ -0.73
BRCA1-217ENST00000487825 SYMPKQ92797 1274 aaKnown RBP10.46□□□□□ -0.73
BRCA1-217ENST00000487825 USB1Q9BQ65 265 aaKnown RBP10.46□□□□□ -0.73
BRCA1-217ENST00000487825 FCF1Q9Y324 198 aaKnown RBP10.46□□□□□ -0.73
BRCA1-217ENST00000487825 NDUFV2P19404 249 aa10.45□□□□□ -0.74
BRCA1-217ENST00000487825 MOXD2PA6NHM9 499 aa10.44□□□□□ -0.74
BRCA1-217ENST00000487825 FDX1P10109 184 aa10.44□□□□□ -0.74
BRCA1-217ENST00000487825 MSS51Q4VC12 460 aa10.44□□□□□ -0.74
BRCA1-217ENST00000487825 PCDHGC3Q9UN70 934 aa10.44□□□□□ -0.74
BRCA1-217ENST00000487825 NACADO15069 1562 aa10.43□□□□□ -0.74
BRCA1-217ENST00000487825 GFRA3O60609 400 aa10.43□□□□□ -0.74
BRCA1-217ENST00000487825 SPRYD7Q5W111 196 aa10.42□□□□□ -0.74
BRCA1-217ENST00000487825 TBC1D2Q9BYX2 928 aa10.42□□□□□ -0.74
BRCA1-217ENST00000487825 C6orf229H3BNL8 230 aa10.4□□□□□ -0.74
BRCA1-217ENST00000487825 PDZRN3Q9UPQ7 1066 aa10.4□□□□□ -0.74
BRCA1-217ENST00000487825 ZNF697Q5TEC3 545 aa10.39□□□□□ -0.75
BRCA1-217ENST00000487825 ZNF598Q86UK7 904 aaKnown RBP10.39□□□□□ -0.75
BRCA1-217ENST00000487825 MMP16P51512 607 aa10.38□□□□□ -0.75
BRCA1-217ENST00000487825 Q6ZNB5 142 aa10.38□□□□□ -0.75
BRCA1-217ENST00000487825 BICRAQ9NZM4 1560 aa10.38□□□□□ -0.75
BRCA1-217ENST00000487825 DXOO77932 396 aaKnown RBP10.37□□□□□ -0.75
BRCA1-217ENST00000487825 RETREG3Q86VR2 466 aa10.37□□□□□ -0.75
BRCA1-217ENST00000487825 LAPTM4AQ15012 233 aa10.36□□□□□ -0.75
BRCA1-217ENST00000487825 DIXDC1Q155Q3 683 aa10.36□□□□□ -0.75
BRCA1-217ENST00000487825 CCDC24Q8N4L8 307 aa10.36□□□□□ -0.75
BRCA1-217ENST00000487825 RSBN1LQ6PCB5 846 aaPredicted RBP10.35□□□□□ -0.75
BRCA1-217ENST00000487825 TRIM67Q6ZTA4 783 aa10.35□□□□□ -0.75
BRCA1-217ENST00000487825 GPBP1L1Q9HC44 474 aaPredicted RBP10.35□□□□□ -0.75
BRCA1-217ENST00000487825 NRG2O14511 850 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-217ENST00000487825 ZBTB24O43167 697 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-217ENST00000487825 JUNDP17535 347 aa10.34□□□□□ -0.75
BRCA1-217ENST00000487825 RPIAP49247 311 aa10.34□□□□□ -0.75
BRCA1-217ENST00000487825 RIC3Q7Z5B4 369 aa10.34□□□□□ -0.75
BRCA1-217ENST00000487825 PCDHB15Q9Y5E8 787 aa10.34□□□□□ -0.75
BRCA1-217ENST00000487825 TNFRSF10AO00220 468 aa10.33□□□□□ -0.76
BRCA1-217ENST00000487825 CD2BP2O95400 341 aaKnown RBP10.33□□□□□ -0.76
BRCA1-217ENST00000487825 FOXC1Q12948 553 aa10.33□□□□□ -0.76
BRCA1-217ENST00000487825 MTMR2Q13614 643 aa10.33□□□□□ -0.76
BRCA1-217ENST00000487825 SPTLC1O15269 473 aa10.32□□□□□ -0.76
BRCA1-217ENST00000487825 CSPP1Q1MSJ5 1256 aa10.32□□□□□ -0.76
BRCA1-217ENST00000487825 MYSM1Q5VVJ2 828 aa10.31□□□□□ -0.76
BRCA1-217ENST00000487825 PRR7Q8TB68 274 aa10.31□□□□□ -0.76
BRCA1-217ENST00000487825 CC2D2AQ9P2K1 1620 aa10.31□□□□□ -0.76
BRCA1-217ENST00000487825 CECR2Q9BXF3 1484 aa10.3□□□□□ -0.76
BRCA1-217ENST00000487825 GJA5P36382 358 aa10.3□□□□□ -0.76
BRCA1-217ENST00000487825 KDM4CQ9H3R0 1056 aa10.3□□□□□ -0.76
BRCA1-217ENST00000487825 GDF9O60383 454 aa10.29□□□□□ -0.76
BRCA1-217ENST00000487825 CABLES1Q8TDN4 633 aa10.29□□□□□ -0.76
BRCA1-217ENST00000487825 NUDT12Q9BQG2 462 aa10.29□□□□□ -0.76
BRCA1-217ENST00000487825 LIMD1Q9UGP4 676 aa10.29□□□□□ -0.76
BRCA1-217ENST00000487825 SPDYE5A6NIY4 337 aa10.28□□□□□ -0.76
BRCA1-217ENST00000487825 HRCP23327 699 aa10.28□□□□□ -0.76
BRCA1-217ENST00000487825 TRIM32Q13049 653 aa10.28□□□□□ -0.76
BRCA1-217ENST00000487825 POLR3EQ9NVU0 708 aa10.28□□□□□ -0.76
BRCA1-217ENST00000487825 PKD2L1Q9P0L9 805 aa10.28□□□□□ -0.76
BRCA1-217ENST00000487825 PRR20EP86478 221 aa10.27□□□□□ -0.77
BRCA1-217ENST00000487825 PRR20CP86479 221 aa10.27□□□□□ -0.77
BRCA1-217ENST00000487825 PRR20DP86480 221 aa10.27□□□□□ -0.77
BRCA1-217ENST00000487825 PRR20BP86481 221 aa10.27□□□□□ -0.77
BRCA1-217ENST00000487825 PRR20AP86496 221 aa10.27□□□□□ -0.77
BRCA1-217ENST00000487825 ZBTB3Q9H5J0 574 aa10.27□□□□□ -0.77
BRCA1-217ENST00000487825 FAM117AQ9C073 453 aa10.26□□□□□ -0.77
BRCA1-217ENST00000487825 NUTM2BA6NNL0 878 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-217ENST00000487825 NUTM2EB1AL46 878 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-217ENST00000487825 CFAP99D6REC4 459 aa10.25□□□□□ -0.77
BRCA1-217ENST00000487825 QPCTQ16769 361 aa10.25□□□□□ -0.77
BRCA1-217ENST00000487825 NUTM2DQ5VT03 806 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-217ENST00000487825 PTCRAQ6ISU1 281 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-217ENST00000487825 NUTM2AQ8IVF1 878 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-217ENST00000487825 RSPH6AQ9H0K4 717 aa10.25□□□□□ -0.77
BRCA1-217ENST00000487825 LCE2BO14633 110 aa10.24□□□□□ -0.77
BRCA1-217ENST00000487825 CCNYL3P0C7X3 344 aa10.24□□□□□ -0.77
BRCA1-217ENST00000487825 TPRNQ4KMQ1 711 aa10.24□□□□□ -0.77
BRCA1-217ENST00000487825 TRAF7Q6Q0C0 670 aa10.24□□□□□ -0.77
BRCA1-217ENST00000487825 CLK2P49760 499 aaKnown RBP10.23□□□□□ -0.77
BRCA1-217ENST00000487825 PTPRNQ16849 979 aa10.23□□□□□ -0.77
BRCA1-217ENST00000487825 PRPF38BQ5VTL8 546 aaKnown RBP10.23□□□□□ -0.77
BRCA1-217ENST00000487825 TSC1Q92574 1164 aa10.23□□□□□ -0.77
BRCA1-217ENST00000487825 FAM187AA6NFU0 413 aa10.22□□□□□ -0.77
BRCA1-217ENST00000487825 PKDCCQ504Y2 493 aa10.22□□□□□ -0.77
BRCA1-217ENST00000487825 DESI1Q6ICB0 168 aa10.22□□□□□ -0.77
BRCA1-217ENST00000487825 DDRGK1Q96HY6 314 aa10.21□□□□□ -0.77
BRCA1-217ENST00000487825 ATP1B4Q9UN42 357 aaPredicted RBP10.21□□□□□ -0.77
BRCA1-217ENST00000487825 LILRB3O75022 631 aa10.2□□□□□ -0.78
BRCA1-217ENST00000487825 NEUROD2Q15784 382 aa10.2□□□□□ -0.78
BRCA1-217ENST00000487825 RTL5Q5HYW3 569 aaPredicted RBP10.2□□□□□ -0.78
BRCA1-217ENST00000487825 CYP4X1Q8N118 509 aa10.2□□□□□ -0.78
BRCA1-217ENST00000487825 EVA1BQ9NVM1 165 aa10.2□□□□□ -0.78
BRCA1-217ENST00000487825 SHROOM4Q9ULL8 1493 aa10.19□□□□□ -0.78
BRCA1-217ENST00000487825 PLEKHG3A1L390 1219 aa10.19□□□□□ -0.78
BRCA1-217ENST00000487825 WNT7AO00755 349 aa10.19□□□□□ -0.78
BRCA1-217ENST00000487825 SKOR1P84550 965 aa10.19□□□□□ -0.78
BRCA1-217ENST00000487825 TUSC1Q2TAM9 212 aa10.19□□□□□ -0.78
BRCA1-217ENST00000487825 LYPD8Q6UX82 237 aa10.19□□□□□ -0.78
BRCA1-217ENST00000487825 MRGPRX2Q96LB1 330 aa10.19□□□□□ -0.78
BRCA1-217ENST00000487825 DGAT1O75907 488 aa10.18□□□□□ -0.78
BRCA1-217ENST00000487825 CTHP32929 405 aa10.18□□□□□ -0.78
BRCA1-217ENST00000487825 KCNH2Q12809 1159 aa10.18□□□□□ -0.78
BRCA1-217ENST00000487825 UNC93B1Q9H1C4 597 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms