RNA–Protein interactions for RNA: ENST00000487721.1

SFXN3-206, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-206ENST00000487721 ROBO2Q9HCK4 1378 aa17.6■□□□□ 0.41
SFXN3-206ENST00000487721 XRN1Q8IZH2 1706 aaKnown RBP17.58■□□□□ 0.41
SFXN3-206ENST00000487721 PRAG1Q86YV5 1406 aa17.58■□□□□ 0.41
SFXN3-206ENST00000487721 UPF1Q92900 1129 aaKnown RBP eCLIP17.58■□□□□ 0.4
SFXN3-206ENST00000487721 SIRT1Q96EB6 747 aa17.58■□□□□ 0.4
SFXN3-206ENST00000487721 SIN3AQ96ST3 1273 aa17.58■□□□□ 0.4
SFXN3-206ENST00000487721 ASXL1Q8IXJ9 1541 aa17.57■□□□□ 0.4
SFXN3-206ENST00000487721 YTHDC2Q9H6S0 1430 aaKnown RBP17.57■□□□□ 0.4
SFXN3-206ENST00000487721 ADGRL3Q9HAR2 1447 aa17.57■□□□□ 0.4
SFXN3-206ENST00000487721 IFT172Q9UG01 1749 aa17.56■□□□□ 0.4
SFXN3-206ENST00000487721 AFF2P51816 1311 aa17.56■□□□□ 0.4
SFXN3-206ENST00000487721 SHPRHQ149N8 1683 aa17.56■□□□□ 0.4
SFXN3-206ENST00000487721 POGKQ9P215 609 aa17.55■□□□□ 0.4
SFXN3-206ENST00000487721 TECPR2O15040 1411 aa17.55■□□□□ 0.4
SFXN3-206ENST00000487721 WAPLQ7Z5K2 1190 aa17.54■□□□□ 0.4
SFXN3-206ENST00000487721 L3MBTL2Q969R5 705 aa17.54■□□□□ 0.4
SFXN3-206ENST00000487721 C8orf37Q96NL8 207 aa17.54■□□□□ 0.4
SFXN3-206ENST00000487721 QTRT2Q9H974 415 aaKnown RBP17.54■□□□□ 0.4
SFXN3-206ENST00000487721 ORAI2Q96SN7 254 aa17.53■□□□□ 0.4
SFXN3-206ENST00000487721 SETD1AO15047 1707 aaKnown RBP17.52■□□□□ 0.4
SFXN3-206ENST00000487721 PNPLA6Q8IY17 1366 aa17.52■□□□□ 0.39
SFXN3-206ENST00000487721 C1orf167Q5SNV9 1468 aa17.51■□□□□ 0.39
SFXN3-206ENST00000487721 LAMC1P11047 1609 aa17.51■□□□□ 0.39
SFXN3-206ENST00000487721 PRAM1Q96QH2 718 aa17.51■□□□□ 0.39
SFXN3-206ENST00000487721 TRAK1Q9UPV9 953 aa17.51■□□□□ 0.39
SFXN3-206ENST00000487721 ADAMTS2O95450 1211 aa17.5■□□□□ 0.39
SFXN3-206ENST00000487721 NGLY1Q96IV0 654 aa17.5■□□□□ 0.39
SFXN3-206ENST00000487721 RBM6P78332 1123 aaKnown RBP17.49■□□□□ 0.39
SFXN3-206ENST00000487721 TONSLQ96HA7 1378 aa17.49■□□□□ 0.39
SFXN3-206ENST00000487721 SOS2Q07890 1332 aaPredicted RBP17.48■□□□□ 0.39
SFXN3-206ENST00000487721 SAFB2Q14151 953 aaKnown RBP eCLIP17.48■□□□□ 0.39
SFXN3-206ENST00000487721 NHSL1Q5SYE7 1610 aa17.47■□□□□ 0.39
SFXN3-206ENST00000487721 PLEKHH1Q9ULM0 1364 aa17.47■□□□□ 0.39
SFXN3-206ENST00000487721 CDK12Q9NYV4 1490 aaPredicted RBP17.47■□□□□ 0.39
SFXN3-206ENST00000487721 NALCNQ8IZF0 1738 aa17.44■□□□□ 0.38
SFXN3-206ENST00000487721 DLC1Q96QB1 1528 aa17.44■□□□□ 0.38
SFXN3-206ENST00000487721 ESCO1Q5FWF5 840 aa17.44■□□□□ 0.38
SFXN3-206ENST00000487721 ADGRB1O14514 1584 aa17.44■□□□□ 0.38
SFXN3-206ENST00000487721 NBPF1Q3BBV0 1214 aa17.43■□□□□ 0.38
SFXN3-206ENST00000487721 USP21Q9UK80 565 aa17.43■□□□□ 0.38
SFXN3-206ENST00000487721 NUTM2FA1L443 756 aa17.42■□□□□ 0.38
SFXN3-206ENST00000487721 KNDC1Q76NI1 1749 aa17.41■□□□□ 0.38
SFXN3-206ENST00000487721 FNBP4Q8N3X1 1017 aaPredicted RBP17.41■□□□□ 0.38
SFXN3-206ENST00000487721 CLSPNQ9HAW4 1339 aa17.41■□□□□ 0.38
SFXN3-206ENST00000487721 FOXO3O43524 673 aa17.4■□□□□ 0.38
SFXN3-206ENST00000487721 TRPC5Q9UL62 973 aaPredicted RBP17.4■□□□□ 0.38
SFXN3-206ENST00000487721 NPHP3Q7Z494 1330 aa17.4■□□□□ 0.38
SFXN3-206ENST00000487721 MINK1Q8N4C8 1332 aaPredicted RBP17.4■□□□□ 0.38
SFXN3-206ENST00000487721 CDC42BPGQ6DT37 1551 aa17.4■□□□□ 0.38
SFXN3-206ENST00000487721 EIF3AQ14152 1382 aaKnown RBP17.4■□□□□ 0.38
SFXN3-206ENST00000487721 HIRIP3Q9BW71 556 aaPredicted RBP17.39■□□□□ 0.37
SFXN3-206ENST00000487721 ROCK2O75116 1388 aaKnown RBP17.39■□□□□ 0.37
SFXN3-206ENST00000487721 RGS12O14924 1447 aa17.38■□□□□ 0.37
SFXN3-206ENST00000487721 CCER1Q8TC90 406 aaPredicted RBP17.38■□□□□ 0.37
SFXN3-206ENST00000487721 WASLO00401 505 aaPredicted RBP17.37■□□□□ 0.37
SFXN3-206ENST00000487721 XPCQ01831 940 aaPredicted RBP17.37■□□□□ 0.37
SFXN3-206ENST00000487721 TIMELESSQ9UNS1 1208 aa17.36■□□□□ 0.37
SFXN3-206ENST00000487721 CENPJQ9HC77 1338 aaPredicted RBP17.36■□□□□ 0.37
SFXN3-206ENST00000487721 PHF8Q9UPP1 1060 aa17.35■□□□□ 0.37
SFXN3-206ENST00000487721 KIAA1210Q9ULL0 1709 aa17.35■□□□□ 0.37
SFXN3-206ENST00000487721 NBPF8Q3BBV2 869 aa17.34■□□□□ 0.37
SFXN3-206ENST00000487721 CARD11Q9BXL7 1154 aa17.33■□□□□ 0.36
SFXN3-206ENST00000487721 ANKARQ7Z5J8 1434 aa17.32■□□□□ 0.36
SFXN3-206ENST00000487721 PSME1Q06323 249 aa17.32■□□□□ 0.36
SFXN3-206ENST00000487721 CDK19Q9BWU1 502 aa17.31■□□□□ 0.36
SFXN3-206ENST00000487721 PXDNQ92626 1479 aa17.31■□□□□ 0.36
SFXN3-206ENST00000487721 ATRNO75882 1429 aa17.3■□□□□ 0.36
SFXN3-206ENST00000487721 ATAD2Q6PL18 1390 aa17.3■□□□□ 0.36
SFXN3-206ENST00000487721 SRPK2P78362 688 aaKnown RBP17.29■□□□□ 0.36
SFXN3-206ENST00000487721 KRT28Q7Z3Y7 464 aa17.29■□□□□ 0.36
SFXN3-206ENST00000487721 NUDT16Q96DE0 195 aaKnown RBP17.29■□□□□ 0.36
SFXN3-206ENST00000487721 GJD4Q96KN9 370 aaPredicted RBP17.29■□□□□ 0.36
SFXN3-206ENST00000487721 BCL9LQ86UU0 1499 aa17.29■□□□□ 0.36
SFXN3-206ENST00000487721 ADGRB2O60241 1585 aa17.28■□□□□ 0.36
SFXN3-206ENST00000487721 NGDNQ8NEJ9 315 aaKnown RBP17.28■□□□□ 0.36
SFXN3-206ENST00000487721 PMFBP1Q8TBY8 1022 aa17.28■□□□□ 0.36
SFXN3-206ENST00000487721 GPRASP1Q5JY77 1395 aa17.28■□□□□ 0.36
SFXN3-206ENST00000487721 SPATA31A3Q5VYP0 1347 aa17.27■□□□□ 0.36
SFXN3-206ENST00000487721 COL22A1Q8NFW1 1626 aaPredicted RBP17.27■□□□□ 0.36
SFXN3-206ENST00000487721 EVC2Q86UK5 1308 aa17.26■□□□□ 0.35
SFXN3-206ENST00000487721 UNC5CLQ8IV45 518 aa17.26■□□□□ 0.35
SFXN3-206ENST00000487721 CCDC61Q9Y6R9 512 aa17.26■□□□□ 0.35
SFXN3-206ENST00000487721 FMN2Q9NZ56 1722 aa17.26■□□□□ 0.35
SFXN3-206ENST00000487721 TULP4Q9NRJ4 1543 aa17.26■□□□□ 0.35
SFXN3-206ENST00000487721 CCDC125Q86Z20 511 aa17.25■□□□□ 0.35
SFXN3-206ENST00000487721 TRPM1Q7Z4N2 1603 aa17.25■□□□□ 0.35
SFXN3-206ENST00000487721 RALGAPBQ86X10 1494 aa17.24■□□□□ 0.35
SFXN3-206ENST00000487721 PRR36Q9H6K5 1346 aa17.24■□□□□ 0.35
SFXN3-206ENST00000487721 SLC24A1O60721 1099 aa17.24■□□□□ 0.35
SFXN3-206ENST00000487721 ARHGEF28Q8N1W1 1705 aaKnown RBP17.24■□□□□ 0.35
SFXN3-206ENST00000487721 LMOD2Q6P5Q4 547 aa17.23■□□□□ 0.35
SFXN3-206ENST00000487721 HAP1P54257 671 aaPredicted RBP17.22■□□□□ 0.35
SFXN3-206ENST00000487721 CABP2Q9NPB3 220 aa17.22■□□□□ 0.35
SFXN3-206ENST00000487721 KIF1AQ12756 1690 aa17.22■□□□□ 0.35
SFXN3-206ENST00000487721 SBNO1A3KN83 1393 aa17.21■□□□□ 0.35
SFXN3-206ENST00000487721 PLEKHG5O94827 1062 aa17.21■□□□□ 0.35
SFXN3-206ENST00000487721 CABLES1Q8TDN4 633 aa17.21■□□□□ 0.35
SFXN3-206ENST00000487721 ZRANB1Q9UGI0 708 aa17.21■□□□□ 0.35
SFXN3-206ENST00000487721 PLEKHG3A1L390 1219 aa17.2■□□□□ 0.34
SFXN3-206ENST00000487721 ARHGEF10O15013 1369 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms