RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 CTC1Q2NKJ3 1217 aa9.47□□□□□ -0.89
HMGB1P36-201ENST00000487709 LCE2AQ5TA79 106 aaPredicted RBP9.47□□□□□ -0.89
HMGB1P36-201ENST00000487709 TRIM32Q13049 653 aa9.46□□□□□ -0.9
HMGB1P36-201ENST00000487709 WNT7AO00755 349 aa9.44□□□□□ -0.9
HMGB1P36-201ENST00000487709 WFS1O76024 890 aa9.44□□□□□ -0.9
HMGB1P36-201ENST00000487709 Q3C1V9 767 aa9.44□□□□□ -0.9
HMGB1P36-201ENST00000487709 SMPD1P17405 629 aa9.43□□□□□ -0.9
HMGB1P36-201ENST00000487709 SMCPP49901 116 aaPredicted RBP9.43□□□□□ -0.9
HMGB1P36-201ENST00000487709 SNIP1Q8TAD8 396 aaKnown RBP9.43□□□□□ -0.9
HMGB1P36-201ENST00000487709 MRGPRX2Q96LB1 330 aa9.43□□□□□ -0.9
HMGB1P36-201ENST00000487709 J3QL48 77 aa9.42□□□□□ -0.9
HMGB1P36-201ENST00000487709 PLCB2Q00722 1185 aa9.42□□□□□ -0.9
HMGB1P36-201ENST00000487709 HLA-CQ95604 372 aa9.42□□□□□ -0.9
HMGB1P36-201ENST00000487709 CD46P15529 392 aa9.41□□□□□ -0.9
HMGB1P36-201ENST00000487709 MMP16P51512 607 aa9.41□□□□□ -0.9
HMGB1P36-201ENST00000487709 CCDC24Q8N4L8 307 aa9.41□□□□□ -0.9
HMGB1P36-201ENST00000487709 KDM4AO75164 1064 aa9.4□□□□□ -0.9
HMGB1P36-201ENST00000487709 USB1Q9BQ65 265 aaKnown RBP9.4□□□□□ -0.9
HMGB1P36-201ENST00000487709 ATP13A2Q9NQ11 1180 aa9.4□□□□□ -0.9
HMGB1P36-201ENST00000487709 MDM2Q00987 491 aaPredicted RBP9.39□□□□□ -0.91
HMGB1P36-201ENST00000487709 DXOO77932 396 aaKnown RBP9.38□□□□□ -0.91
HMGB1P36-201ENST00000487709 SNRPBP14678 240 aaKnown RBP9.38□□□□□ -0.91
HMGB1P36-201ENST00000487709 NFX1Q12986 1120 aaKnown RBP9.38□□□□□ -0.91
HMGB1P36-201ENST00000487709 MAP2K5Q13163 448 aa9.37□□□□□ -0.91
HMGB1P36-201ENST00000487709 HPS1Q92902 700 aa9.37□□□□□ -0.91
HMGB1P36-201ENST00000487709 REPIN1Q9BWE0 567 aaKnown RBP9.36□□□□□ -0.91
HMGB1P36-201ENST00000487709 GUCA2AQ02747 115 aa9.35□□□□□ -0.91
HMGB1P36-201ENST00000487709 HOXA2O43364 376 aa9.34□□□□□ -0.91
HMGB1P36-201ENST00000487709 SKOR1P84550 965 aa9.34□□□□□ -0.91
HMGB1P36-201ENST00000487709 RC3H1Q5TC82 1133 aaKnown RBP9.34□□□□□ -0.91
HMGB1P36-201ENST00000487709 IRF6O14896 467 aa9.33□□□□□ -0.92
HMGB1P36-201ENST00000487709 HAP1P54257 671 aaPredicted RBP9.33□□□□□ -0.92
HMGB1P36-201ENST00000487709 USP46P62068 366 aa9.33□□□□□ -0.92
HMGB1P36-201ENST00000487709 TRIM47Q96LD4 638 aa9.33□□□□□ -0.92
HMGB1P36-201ENST00000487709 SENP2Q9HC62 589 aa9.33□□□□□ -0.92
HMGB1P36-201ENST00000487709 SYMPKQ92797 1274 aaKnown RBP9.32□□□□□ -0.92
HMGB1P36-201ENST00000487709 SLC24A1O60721 1099 aa9.31□□□□□ -0.92
HMGB1P36-201ENST00000487709 ALDH1A1P00352 501 aa9.31□□□□□ -0.92
HMGB1P36-201ENST00000487709 WNT7BP56706 349 aa9.31□□□□□ -0.92
HMGB1P36-201ENST00000487709 TERTO14746 1132 aaKnown RBP9.3□□□□□ -0.92
HMGB1P36-201ENST00000487709 WIPF1O43516 503 aa9.3□□□□□ -0.92
HMGB1P36-201ENST00000487709 JUNDP17535 347 aa9.3□□□□□ -0.92
HMGB1P36-201ENST00000487709 LCE2CQ5TA81 110 aa9.3□□□□□ -0.92
HMGB1P36-201ENST00000487709 CCDC102AQ96A19 550 aa9.3□□□□□ -0.92
HMGB1P36-201ENST00000487709 INSM1Q01101 510 aaPredicted RBP9.29□□□□□ -0.92
HMGB1P36-201ENST00000487709 STK17AQ9UEE5 414 aa9.29□□□□□ -0.92
HMGB1P36-201ENST00000487709 TULP1O00294 542 aaPredicted RBP9.28□□□□□ -0.92
HMGB1P36-201ENST00000487709 KIFC2Q96AC6 838 aa9.28□□□□□ -0.92
HMGB1P36-201ENST00000487709 NUDT12Q9BQG2 462 aa9.27□□□□□ -0.93
HMGB1P36-201ENST00000487709 KDM2AQ9Y2K7 1162 aa9.27□□□□□ -0.93
HMGB1P36-201ENST00000487709 MINK1Q8N4C8 1332 aaPredicted RBP9.27□□□□□ -0.93
HMGB1P36-201ENST00000487709 NUTM1Q86Y26 1132 aa9.26□□□□□ -0.93
HMGB1P36-201ENST00000487709 EHBP1Q8NDI1 1231 aa9.26□□□□□ -0.93
HMGB1P36-201ENST00000487709 GPCPD1Q9NPB8 672 aa9.26□□□□□ -0.93
HMGB1P36-201ENST00000487709 BMP1P13497 986 aa9.25□□□□□ -0.93
HMGB1P36-201ENST00000487709 PTCRAQ6ISU1 281 aaPredicted RBP9.25□□□□□ -0.93
HMGB1P36-201ENST00000487709 FAM217BQ9NTX9 383 aaPredicted RBP9.25□□□□□ -0.93
HMGB1P36-201ENST00000487709 CLCN1P35523 988 aa9.24□□□□□ -0.93
HMGB1P36-201ENST00000487709 RETREG3Q86VR2 466 aa9.24□□□□□ -0.93
HMGB1P36-201ENST00000487709 C6orf229H3BNL8 230 aa9.23□□□□□ -0.93
HMGB1P36-201ENST00000487709 KRI1Q8N9T8 703 aaKnown RBP9.23□□□□□ -0.93
HMGB1P36-201ENST00000487709 WASF2Q9Y6W5 498 aa9.23□□□□□ -0.93
HMGB1P36-201ENST00000487709 SIAH2O43255 324 aa9.21□□□□□ -0.94
HMGB1P36-201ENST00000487709 FDX1P10109 184 aa9.21□□□□□ -0.94
HMGB1P36-201ENST00000487709 PCDHGC3Q9UN70 934 aa9.21□□□□□ -0.94
HMGB1P36-201ENST00000487709 CAPN5O15484 640 aaPredicted RBP9.2□□□□□ -0.94
HMGB1P36-201ENST00000487709 MS4A1P11836 297 aa9.2□□□□□ -0.94
HMGB1P36-201ENST00000487709 TRIM46Q7Z4K8 759 aa9.2□□□□□ -0.94
HMGB1P36-201ENST00000487709 CCNYL3P0C7X3 344 aa9.19□□□□□ -0.94
HMGB1P36-201ENST00000487709 SH3BP2P78314 561 aa9.19□□□□□ -0.94
HMGB1P36-201ENST00000487709 LINC01559Q495D7 138 aa9.19□□□□□ -0.94
HMGB1P36-201ENST00000487709 SLC16A10Q8TF71 515 aa9.19□□□□□ -0.94
HMGB1P36-201ENST00000487709 VEGFBP49765 207 aa9.18□□□□□ -0.94
HMGB1P36-201ENST00000487709 NXF1Q9UBU9 619 aaKnown RBP9.18□□□□□ -0.94
HMGB1P36-201ENST00000487709 TLL2Q9Y6L7 1015 aa9.18□□□□□ -0.94
HMGB1P36-201ENST00000487709 UNC93B1Q9H1C4 597 aa9.17□□□□□ -0.94
HMGB1P36-201ENST00000487709 NDUFV2P19404 249 aa9.15□□□□□ -0.94
HMGB1P36-201ENST00000487709 GMPRP36959 345 aa9.15□□□□□ -0.94
HMGB1P36-201ENST00000487709 SSTR3P32745 418 aaPredicted RBP9.14□□□□□ -0.95
HMGB1P36-201ENST00000487709 PTPRNQ16849 979 aa9.14□□□□□ -0.95
HMGB1P36-201ENST00000487709 SPIRE2Q8WWL2 714 aa9.14□□□□□ -0.95
HMGB1P36-201ENST00000487709 BAP1Q92560 729 aa9.14□□□□□ -0.95
HMGB1P36-201ENST00000487709 MOXD2PA6NHM9 499 aa9.13□□□□□ -0.95
HMGB1P36-201ENST00000487709 PRR7Q8TB68 274 aa9.13□□□□□ -0.95
HMGB1P36-201ENST00000487709 TTLL12Q14166 644 aaPredicted RBP9.12□□□□□ -0.95
HMGB1P36-201ENST00000487709 IRF7Q92985 503 aa9.12□□□□□ -0.95
HMGB1P36-201ENST00000487709 ZFP42Q96MM3 310 aa9.12□□□□□ -0.95
HMGB1P36-201ENST00000487709 EVA1BQ9NVM1 165 aa9.12□□□□□ -0.95
HMGB1P36-201ENST00000487709 KCNH2Q12809 1159 aa9.11□□□□□ -0.95
HMGB1P36-201ENST00000487709 NNTQ13423 1086 aa9.11□□□□□ -0.95
HMGB1P36-201ENST00000487709 ZNF511Q8NB15 262 aa9.11□□□□□ -0.95
HMGB1P36-201ENST00000487709 FAM181BA6NEQ2 426 aa9.09□□□□□ -0.95
HMGB1P36-201ENST00000487709 H3BM21 787 aa9.09□□□□□ -0.95
HMGB1P36-201ENST00000487709 MTMR2Q13614 643 aa9.09□□□□□ -0.95
HMGB1P36-201ENST00000487709 ZSCAN1Q8NBB4 408 aa9.09□□□□□ -0.95
HMGB1P36-201ENST00000487709 ERBB4Q15303 1308 aa9.08□□□□□ -0.96
HMGB1P36-201ENST00000487709 PLEKHG3A1L390 1219 aa9.08□□□□□ -0.96
HMGB1P36-201ENST00000487709 NPAS3Q8IXF0 933 aa9.08□□□□□ -0.96
HMGB1P36-201ENST00000487709 VARSP26640 1264 aaKnown RBP9.07□□□□□ -0.96
HMGB1P36-201ENST00000487709 CTHP32929 405 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms