RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 DAXXQ9UER7 740 aaPredicted RBP10.39□□□□□ -0.75
UBR3-211ENST00000487689 SEMA3EO15041 775 aa10.38□□□□□ -0.75
UBR3-211ENST00000487689 TRIM47Q96LD4 638 aa10.38□□□□□ -0.75
UBR3-211ENST00000487689 SENP2Q9HC62 589 aa10.38□□□□□ -0.75
UBR3-211ENST00000487689 SALL2Q9Y467 1007 aaPredicted RBP10.38□□□□□ -0.75
UBR3-211ENST00000487689 HIC1Q14526 733 aa10.37□□□□□ -0.75
UBR3-211ENST00000487689 J3QL48 77 aa10.36□□□□□ -0.75
UBR3-211ENST00000487689 GCGRP47871 477 aa10.36□□□□□ -0.75
UBR3-211ENST00000487689 MSS51Q4VC12 460 aa10.36□□□□□ -0.75
UBR3-211ENST00000487689 MRGPRX2Q96LB1 330 aa10.36□□□□□ -0.75
UBR3-211ENST00000487689 FECHP22830 423 aa10.35□□□□□ -0.75
UBR3-211ENST00000487689 TRIM32Q13049 653 aa10.35□□□□□ -0.75
UBR3-211ENST00000487689 RNF19BQ6ZMZ0 732 aa10.35□□□□□ -0.75
UBR3-211ENST00000487689 NLRP7Q8WX94 980 aa10.35□□□□□ -0.75
UBR3-211ENST00000487689 TULP1O00294 542 aaPredicted RBP10.34□□□□□ -0.75
UBR3-211ENST00000487689 HPS1Q92902 700 aa10.33□□□□□ -0.76
UBR3-211ENST00000487689 KIFC2Q96AC6 838 aa10.32□□□□□ -0.76
UBR3-211ENST00000487689 TESPA1A2RU30 521 aaPredicted RBP10.3□□□□□ -0.76
UBR3-211ENST00000487689 SULF1Q8IWU6 871 aa10.3□□□□□ -0.76
UBR3-211ENST00000487689 GNPATO15228 680 aa10.29□□□□□ -0.76
UBR3-211ENST00000487689 VSIG10Q8N0Z9 540 aa10.29□□□□□ -0.76
UBR3-211ENST00000487689 RBM26Q5T8P6 1007 aaKnown RBP10.28□□□□□ -0.76
UBR3-211ENST00000487689 MMP16P51512 607 aa10.27□□□□□ -0.77
UBR3-211ENST00000487689 GRIPAP1Q4V328 841 aa10.27□□□□□ -0.77
UBR3-211ENST00000487689 SLC16A10Q8TF71 515 aa10.27□□□□□ -0.77
UBR3-211ENST00000487689 REPIN1Q9BWE0 567 aaKnown RBP10.27□□□□□ -0.77
UBR3-211ENST00000487689 FAM181BA6NEQ2 426 aa10.26□□□□□ -0.77
UBR3-211ENST00000487689 Q3C1V9 767 aa10.25□□□□□ -0.77
UBR3-211ENST00000487689 RC3H1Q5TC82 1133 aaKnown RBP10.24□□□□□ -0.77
UBR3-211ENST00000487689 PHOX2BQ99453 314 aa10.24□□□□□ -0.77
UBR3-211ENST00000487689 GMPRP36959 345 aa10.23□□□□□ -0.77
UBR3-211ENST00000487689 NXF1Q9UBU9 619 aaKnown RBP10.23□□□□□ -0.77
UBR3-211ENST00000487689 GPR37O15354 613 aa10.22□□□□□ -0.77
UBR3-211ENST00000487689 DXOO77932 396 aaKnown RBP10.22□□□□□ -0.77
UBR3-211ENST00000487689 SKOR1P84550 965 aa10.22□□□□□ -0.77
UBR3-211ENST00000487689 CCDC24Q8N4L8 307 aa10.22□□□□□ -0.77
UBR3-211ENST00000487689 GPIHBP1Q8IV16 184 aa10.21□□□□□ -0.77
UBR3-211ENST00000487689 USB1Q9BQ65 265 aaKnown RBP10.21□□□□□ -0.77
UBR3-211ENST00000487689 KDM2AQ9Y2K7 1162 aa10.21□□□□□ -0.77
UBR3-211ENST00000487689 ALDH1A1P00352 501 aa10.2□□□□□ -0.78
UBR3-211ENST00000487689 LORP23490 312 aaPredicted RBP10.2□□□□□ -0.78
UBR3-211ENST00000487689 ZSCAN1Q8NBB4 408 aa10.2□□□□□ -0.78
UBR3-211ENST00000487689 WNT7BP56706 349 aa10.19□□□□□ -0.78
UBR3-211ENST00000487689 LOC100996750A0A140TA64 210 aa10.18□□□□□ -0.78
UBR3-211ENST00000487689 KRTAP4-6Q9BYQ5 205 aa10.18□□□□□ -0.78
UBR3-211ENST00000487689 BMP1P13497 986 aa10.17□□□□□ -0.78
UBR3-211ENST00000487689 VEGFBP49765 207 aa10.17□□□□□ -0.78
UBR3-211ENST00000487689 IRF7Q92985 503 aa10.17□□□□□ -0.78
UBR3-211ENST00000487689 TRIM46Q7Z4K8 759 aa10.16□□□□□ -0.78
UBR3-211ENST00000487689 NPAS3Q8IXF0 933 aa10.15□□□□□ -0.78
UBR3-211ENST00000487689 CD46P15529 392 aa10.14□□□□□ -0.79
UBR3-211ENST00000487689 CAPN5O15484 640 aaPredicted RBP10.13□□□□□ -0.79
UBR3-211ENST00000487689 KDM4AO75164 1064 aa10.13□□□□□ -0.79
UBR3-211ENST00000487689 HLA-CQ95604 372 aa10.13□□□□□ -0.79
UBR3-211ENST00000487689 H3BM21 787 aa10.12□□□□□ -0.79
UBR3-211ENST00000487689 ERBB4Q15303 1308 aa10.11□□□□□ -0.79
UBR3-211ENST00000487689 SIAH2O43255 324 aa10.11□□□□□ -0.79
UBR3-211ENST00000487689 EHBP1Q8NDI1 1231 aa10.1□□□□□ -0.79
UBR3-211ENST00000487689 WASF2Q9Y6W5 498 aa10.1□□□□□ -0.79
UBR3-211ENST00000487689 JUNDP17535 347 aa10.08□□□□□ -0.8
UBR3-211ENST00000487689 USP46P62068 366 aa10.07□□□□□ -0.8
UBR3-211ENST00000487689 GUCA2AQ02747 115 aa10.06□□□□□ -0.8
UBR3-211ENST00000487689 PTCRAQ6ISU1 281 aaPredicted RBP10.06□□□□□ -0.8
UBR3-211ENST00000487689 HOXA2O43364 376 aa10.05□□□□□ -0.8
UBR3-211ENST00000487689 SYMPKQ92797 1274 aaKnown RBP10.05□□□□□ -0.8
UBR3-211ENST00000487689 ZFP42Q96MM3 310 aa10.05□□□□□ -0.8
UBR3-211ENST00000487689 NUDT12Q9BQG2 462 aa10.04□□□□□ -0.8
UBR3-211ENST00000487689 MAP2K5Q13163 448 aa10.03□□□□□ -0.8
UBR3-211ENST00000487689 SUZ12Q15022 739 aaKnown RBP10.02□□□□□ -0.81
UBR3-211ENST00000487689 SH3BP2P78314 561 aa10.01□□□□□ -0.81
UBR3-211ENST00000487689 KRI1Q8N9T8 703 aaKnown RBP10.01□□□□□ -0.81
UBR3-211ENST00000487689 MDM2Q00987 491 aaPredicted RBP10□□□□□ -0.81
UBR3-211ENST00000487689 MINK1Q8N4C8 1332 aaPredicted RBP9.99□□□□□ -0.81
UBR3-211ENST00000487689 RETREG3Q86VR2 466 aa9.98□□□□□ -0.81
UBR3-211ENST00000487689 TLL2Q9Y6L7 1015 aa9.98□□□□□ -0.81
UBR3-211ENST00000487689 IRF6O14896 467 aa9.97□□□□□ -0.81
UBR3-211ENST00000487689 SOBPA7XYQ1 873 aa9.96□□□□□ -0.82
UBR3-211ENST00000487689 LINC01559Q495D7 138 aa9.96□□□□□ -0.82
UBR3-211ENST00000487689 MRPL14Q6P1L8 145 aaKnown RBP9.96□□□□□ -0.82
UBR3-211ENST00000487689 PURBQ96QR8 312 aaKnown RBP9.96□□□□□ -0.82
UBR3-211ENST00000487689 CCNYL3P0C7X3 344 aa9.95□□□□□ -0.82
UBR3-211ENST00000487689 NNTQ13423 1086 aa9.95□□□□□ -0.82
UBR3-211ENST00000487689 SCARF1Q14162 830 aa9.95□□□□□ -0.82
UBR3-211ENST00000487689 VSIG8P0DPA2 414 aa9.94□□□□□ -0.82
UBR3-211ENST00000487689 MS4A1P11836 297 aa9.94□□□□□ -0.82
UBR3-211ENST00000487689 KCTD17Q8N5Z5 321 aa9.93□□□□□ -0.82
UBR3-211ENST00000487689 BAP1Q92560 729 aa9.93□□□□□ -0.82
UBR3-211ENST00000487689 UNC93B1Q9H1C4 597 aa9.93□□□□□ -0.82
UBR3-211ENST00000487689 PLEKHG3A1L390 1219 aa9.92□□□□□ -0.82
UBR3-211ENST00000487689 TIMP2P16035 220 aa9.92□□□□□ -0.82
UBR3-211ENST00000487689 NUTM1Q86Y26 1132 aa9.92□□□□□ -0.82
UBR3-211ENST00000487689 C6orf229H3BNL8 230 aa9.91□□□□□ -0.82
UBR3-211ENST00000487689 CLCN1P35523 988 aa9.91□□□□□ -0.82
UBR3-211ENST00000487689 WDR4P57081 412 aaKnown RBP9.91□□□□□ -0.82
UBR3-211ENST00000487689 KCNMA1Q12791 1236 aa9.91□□□□□ -0.82
UBR3-211ENST00000487689 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.91□□□□□ -0.82
UBR3-211ENST00000487689 CCDC102AQ96A19 550 aa9.91□□□□□ -0.82
UBR3-211ENST00000487689 ADH1CP00326 375 aa9.9□□□□□ -0.82
UBR3-211ENST00000487689 FDX1P10109 184 aa9.9□□□□□ -0.82
UBR3-211ENST00000487689 PCDHGC3Q9UN70 934 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms