RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 KANK1Q14678 1352 aa9.46□□□□□ -0.9
COL4A3-206ENST00000487633 MYOM3Q5VTT5 1437 aa9.46□□□□□ -0.9
COL4A3-206ENST00000487633 DAPK1P53355 1430 aa9.45□□□□□ -0.9
COL4A3-206ENST00000487633 PXDNQ92626 1479 aa9.45□□□□□ -0.9
COL4A3-206ENST00000487633 PTPN23Q9H3S7 1636 aa9.44□□□□□ -0.9
COL4A3-206ENST00000487633 PLCH1Q4KWH8 1693 aa9.44□□□□□ -0.9
COL4A3-206ENST00000487633 UNC5CLQ8IV45 518 aa9.43□□□□□ -0.9
COL4A3-206ENST00000487633 EZH2Q15910 746 aaKnown RBP9.42□□□□□ -0.9
COL4A3-206ENST00000487633 RGPD1P0DJD0 1748 aa9.42□□□□□ -0.9
COL4A3-206ENST00000487633 RPRD2Q5VT52 1461 aaKnown RBP9.41□□□□□ -0.9
COL4A3-206ENST00000487633 ROBO2Q9HCK4 1378 aa9.41□□□□□ -0.9
COL4A3-206ENST00000487633 SENP3-EIF4A1A0A087X0R7 540 aa9.41□□□□□ -0.9
COL4A3-206ENST00000487633 SF3B2Q13435 895 aaKnown RBP9.41□□□□□ -0.9
COL4A3-206ENST00000487633 KRT27Q7Z3Y8 459 aa9.41□□□□□ -0.9
COL4A3-206ENST00000487633 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.41□□□□□ -0.9
COL4A3-206ENST00000487633 USP32Q8NFA0 1604 aa9.41□□□□□ -0.9
COL4A3-206ENST00000487633 NUP188Q5SRE5 1749 aa9.39□□□□□ -0.91
COL4A3-206ENST00000487633 ABCA3Q99758 1704 aa9.39□□□□□ -0.91
COL4A3-206ENST00000487633 ONECUT3O60422 494 aaPredicted RBP9.39□□□□□ -0.91
COL4A3-206ENST00000487633 PLEKHG5O94827 1062 aa9.39□□□□□ -0.91
COL4A3-206ENST00000487633 HDGFP51858 240 aaKnown RBP9.39□□□□□ -0.91
COL4A3-206ENST00000487633 ZNF784Q8NCA9 323 aaPredicted RBP9.39□□□□□ -0.91
COL4A3-206ENST00000487633 CABLES1Q8TDN4 633 aa9.39□□□□□ -0.91
COL4A3-206ENST00000487633 NRAPQ86VF7 1730 aa9.39□□□□□ -0.91
COL4A3-206ENST00000487633 RGPD8O14715 1765 aaPredicted RBP9.38□□□□□ -0.91
COL4A3-206ENST00000487633 FOXO3O43524 673 aa9.38□□□□□ -0.91
COL4A3-206ENST00000487633 BAG6P46379 1132 aa9.38□□□□□ -0.91
COL4A3-206ENST00000487633 RREB1Q92766 1687 aa9.38□□□□□ -0.91
COL4A3-206ENST00000487633 IQGAP3Q86VI3 1631 aa9.38□□□□□ -0.91
COL4A3-206ENST00000487633 NWD2Q9ULI1 1742 aa9.36□□□□□ -0.91
COL4A3-206ENST00000487633 CEP350Q5VT06 3117 aa9.36□□□□□ -0.91
COL4A3-206ENST00000487633 NUTM2FA1L443 756 aa9.36□□□□□ -0.91
COL4A3-206ENST00000487633 VPS72Q15906 364 aa9.36□□□□□ -0.91
COL4A3-206ENST00000487633 CAMKK2Q96RR4 588 aa9.36□□□□□ -0.91
COL4A3-206ENST00000487633 NEXMIFQ5QGS0 1516 aa9.36□□□□□ -0.91
COL4A3-206ENST00000487633 ADGRL2O95490 1459 aa9.35□□□□□ -0.91
COL4A3-206ENST00000487633 FAM98CQ17RN3 349 aaKnown RBP9.35□□□□□ -0.91
COL4A3-206ENST00000487633 ESCO1Q5FWF5 840 aa9.35□□□□□ -0.91
COL4A3-206ENST00000487633 ANKRD30AQ9BXX3 1397 aa9.35□□□□□ -0.91
COL4A3-206ENST00000487633 THSD7AQ9UPZ6 1657 aa9.33□□□□□ -0.92
COL4A3-206ENST00000487633 DISP2A7MBM2 1401 aa9.33□□□□□ -0.92
COL4A3-206ENST00000487633 ANKRD50Q9ULJ7 1429 aa9.33□□□□□ -0.92
COL4A3-206ENST00000487633 C1QTNF8P60827 252 aa9.33□□□□□ -0.92
COL4A3-206ENST00000487633 CCDC9Q9Y3X0 531 aaKnown RBP9.33□□□□□ -0.92
COL4A3-206ENST00000487633 CHD4Q14839 1912 aa9.33□□□□□ -0.92
COL4A3-206ENST00000487633 SPATA31A3Q5VYP0 1347 aa9.32□□□□□ -0.92
COL4A3-206ENST00000487633 FAM83GA6ND36 823 aa9.32□□□□□ -0.92
COL4A3-206ENST00000487633 PDGFDQ9GZP0 370 aaPredicted RBP9.32□□□□□ -0.92
COL4A3-206ENST00000487633 MYOM1P52179 1685 aa9.32□□□□□ -0.92
COL4A3-206ENST00000487633 NPHP3Q7Z494 1330 aa9.31□□□□□ -0.92
COL4A3-206ENST00000487633 CLTCL1P53675 1640 aa9.31□□□□□ -0.92
COL4A3-206ENST00000487633 A0A0G2JS52 829 aa9.31□□□□□ -0.92
COL4A3-206ENST00000487633 TRIM37O94972 964 aa9.31□□□□□ -0.92
COL4A3-206ENST00000487633 MYT1Q01538 1121 aa9.31□□□□□ -0.92
COL4A3-206ENST00000487633 CDC42BPGQ6DT37 1551 aa9.31□□□□□ -0.92
COL4A3-206ENST00000487633 NRKQ7Z2Y5 1582 aa9.31□□□□□ -0.92
COL4A3-206ENST00000487633 CASZ1Q86V15 1759 aa9.3□□□□□ -0.92
COL4A3-206ENST00000487633 PLEKHH1Q9ULM0 1364 aa9.29□□□□□ -0.92
COL4A3-206ENST00000487633 FMN2Q9NZ56 1722 aa9.29□□□□□ -0.92
COL4A3-206ENST00000487633 ZNF326Q5BKZ1 582 aaKnown RBP9.29□□□□□ -0.92
COL4A3-206ENST00000487633 VPS8Q8N3P4 1428 aa9.29□□□□□ -0.92
COL4A3-206ENST00000487633 KCNQ2O43526 872 aa9.27□□□□□ -0.93
COL4A3-206ENST00000487633 WAPLQ7Z5K2 1190 aa9.27□□□□□ -0.93
COL4A3-206ENST00000487633 NAIPQ13075 1403 aa9.27□□□□□ -0.93
COL4A3-206ENST00000487633 CRYBG1Q9Y4K1 1723 aa9.27□□□□□ -0.93
COL4A3-206ENST00000487633 NINLQ9Y2I6 1382 aa9.26□□□□□ -0.93
COL4A3-206ENST00000487633 PRAG1Q86YV5 1406 aa9.26□□□□□ -0.93
COL4A3-206ENST00000487633 APBA3O96018 575 aa9.26□□□□□ -0.93
COL4A3-206ENST00000487633 KRT28Q7Z3Y7 464 aa9.26□□□□□ -0.93
COL4A3-206ENST00000487633 BTG4Q9NY30 223 aa9.26□□□□□ -0.93
COL4A3-206ENST00000487633 ADGRB2O60241 1585 aa9.25□□□□□ -0.93
COL4A3-206ENST00000487633 TNS3Q68CZ2 1445 aa9.25□□□□□ -0.93
COL4A3-206ENST00000487633 SPON1Q9HCB6 807 aa9.25□□□□□ -0.93
COL4A3-206ENST00000487633 ANO8Q9HCE9 1232 aaPredicted RBP9.25□□□□□ -0.93
COL4A3-206ENST00000487633 PPP1R1BQ9UD71 204 aaPredicted RBP9.25□□□□□ -0.93
COL4A3-206ENST00000487633 KIF1BO60333 1816 aa9.25□□□□□ -0.93
COL4A3-206ENST00000487633 HFM1A2PYH4 1435 aa9.24□□□□□ -0.93
COL4A3-206ENST00000487633 KIF1AQ12756 1690 aa9.24□□□□□ -0.93
COL4A3-206ENST00000487633 TRPM3Q9HCF6 1732 aaPredicted RBP9.24□□□□□ -0.93
COL4A3-206ENST00000487633 IFT172Q9UG01 1749 aa9.24□□□□□ -0.93
COL4A3-206ENST00000487633 SPATA31A5Q5VU36 1347 aa9.24□□□□□ -0.93
COL4A3-206ENST00000487633 SPATA31A7Q8IWB4 1347 aa9.24□□□□□ -0.93
COL4A3-206ENST00000487633 PPLO60437 1756 aa9.24□□□□□ -0.93
COL4A3-206ENST00000487633 GOLGB1Q14789 3259 aaKnown RBP9.23□□□□□ -0.93
COL4A3-206ENST00000487633 SHANK3Q9BYB0 1731 aa9.23□□□□□ -0.93
COL4A3-206ENST00000487633 COL14A1Q05707 1796 aaKnown RBP9.23□□□□□ -0.93
COL4A3-206ENST00000487633 PTGER2P43116 358 aa9.23□□□□□ -0.93
COL4A3-206ENST00000487633 PTF1AQ7RTS3 328 aa9.23□□□□□ -0.93
COL4A3-206ENST00000487633 NUP155O75694 1391 aa9.23□□□□□ -0.93
COL4A3-206ENST00000487633 HAP1P54257 671 aaPredicted RBP9.22□□□□□ -0.93
COL4A3-206ENST00000487633 ALS2Q96Q42 1657 aa9.22□□□□□ -0.93
COL4A3-206ENST00000487633 SBF2Q86WG5 1849 aa9.21□□□□□ -0.93
COL4A3-206ENST00000487633 ZBTB7AO95365 584 aa9.21□□□□□ -0.94
COL4A3-206ENST00000487633 LMOD2Q6P5Q4 547 aa9.21□□□□□ -0.94
COL4A3-206ENST00000487633 CCDC144AA2RUR9 1427 aa9.21□□□□□ -0.94
COL4A3-206ENST00000487633 FAM50AQ14320 339 aaKnown RBP9.2□□□□□ -0.94
COL4A3-206ENST00000487633 STK26Q9P289 416 aa9.2□□□□□ -0.94
COL4A3-206ENST00000487633 ATF5Q9Y2D1 282 aaPredicted RBP9.2□□□□□ -0.94
COL4A3-206ENST00000487633 LRPPRCP42704 1394 aaKnown RBP9.2□□□□□ -0.94
COL4A3-206ENST00000487633 TECPR2O15040 1411 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms