RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 CDC45O75419 566 aa9.43□□□□□ -0.9
COL6A4P1-202ENST00000487147 TESK2Q96S53 571 aa9.43□□□□□ -0.9
COL6A4P1-202ENST00000487147 GCC2Q8IWJ2 1684 aa9.43□□□□□ -0.9
COL6A4P1-202ENST00000487147 AMER1Q5JTC6 1135 aaPredicted RBP9.42□□□□□ -0.9
COL6A4P1-202ENST00000487147 DRC7Q8IY82 874 aa9.42□□□□□ -0.9
COL6A4P1-202ENST00000487147 CCDC39Q9UFE4 941 aa9.42□□□□□ -0.9
COL6A4P1-202ENST00000487147 UHRF1BP1Q6BDS2 1440 aa9.42□□□□□ -0.9
COL6A4P1-202ENST00000487147 PRPF40AO75400 957 aaKnown RBP9.42□□□□□ -0.9
COL6A4P1-202ENST00000487147 NOB1Q9ULX3 412 aaKnown RBP9.42□□□□□ -0.9
COL6A4P1-202ENST00000487147 KDM6BO15054 1643 aa9.42□□□□□ -0.9
COL6A4P1-202ENST00000487147 KDM5BQ9UGL1 1544 aa9.42□□□□□ -0.9
COL6A4P1-202ENST00000487147 SCAPERQ9BY12 1400 aa9.42□□□□□ -0.9
COL6A4P1-202ENST00000487147 HDGFL2Q7Z4V5 671 aaPredicted RBP9.42□□□□□ -0.9
COL6A4P1-202ENST00000487147 SPINK5Q9NQ38 1064 aaPredicted RBP9.42□□□□□ -0.9
COL6A4P1-202ENST00000487147 UQCRHLA0A096LP55 91 aa9.41□□□□□ -0.9
COL6A4P1-202ENST00000487147 GOLGA6L4A6NEF3 574 aa9.41□□□□□ -0.9
COL6A4P1-202ENST00000487147 REC8O95072 547 aa9.41□□□□□ -0.9
COL6A4P1-202ENST00000487147 UQCRHP07919 91 aa9.41□□□□□ -0.9
COL6A4P1-202ENST00000487147 CHD1LQ86WJ1 897 aa9.41□□□□□ -0.9
COL6A4P1-202ENST00000487147 TERF2IPQ9NYB0 399 aa9.41□□□□□ -0.9
COL6A4P1-202ENST00000487147 BLMP54132 1417 aaPredicted RBP9.41□□□□□ -0.9
COL6A4P1-202ENST00000487147 ZMYM4Q5VZL5 1548 aa9.41□□□□□ -0.9
COL6A4P1-202ENST00000487147 KIF14Q15058 1648 aa9.41□□□□□ -0.9
COL6A4P1-202ENST00000487147 CT47B1P0C2W7 299 aaPredicted RBP9.41□□□□□ -0.9
COL6A4P1-202ENST00000487147 RABEP1Q15276 862 aa9.41□□□□□ -0.9
COL6A4P1-202ENST00000487147 PAXIP1Q6ZW49 1069 aaPredicted RBP9.41□□□□□ -0.9
COL6A4P1-202ENST00000487147 PRAG1Q86YV5 1406 aa9.41□□□□□ -0.9
COL6A4P1-202ENST00000487147 INTS3Q68E01 1043 aaKnown RBP9.4□□□□□ -0.9
COL6A4P1-202ENST00000487147 SLC12A5Q9H2X9 1139 aa9.4□□□□□ -0.9
COL6A4P1-202ENST00000487147 HMMRO75330 724 aa9.4□□□□□ -0.9
COL6A4P1-202ENST00000487147 GGT6Q6P531 493 aa9.4□□□□□ -0.9
COL6A4P1-202ENST00000487147 INSRP06213 1382 aa9.4□□□□□ -0.9
COL6A4P1-202ENST00000487147 PTPRGP23470 1445 aa9.4□□□□□ -0.9
COL6A4P1-202ENST00000487147 ARHGEF12Q9NZN5 1544 aa9.4□□□□□ -0.9
COL6A4P1-202ENST00000487147 TRIM6-TRIM34B2RNG4 842 aa9.4□□□□□ -0.91
COL6A4P1-202ENST00000487147 GCC1Q96CN9 775 aa9.4□□□□□ -0.91
COL6A4P1-202ENST00000487147 GPATCH8Q9UKJ3 1502 aaKnown RBP9.39□□□□□ -0.91
COL6A4P1-202ENST00000487147 EVC2Q86UK5 1308 aa9.39□□□□□ -0.91
COL6A4P1-202ENST00000487147 ADRA2BP18089 450 aa9.39□□□□□ -0.91
COL6A4P1-202ENST00000487147 SSFA2P28290 1259 aa9.39□□□□□ -0.91
COL6A4P1-202ENST00000487147 C1orf115Q9H7X2 142 aa9.39□□□□□ -0.91
COL6A4P1-202ENST00000487147 NPM1P06748 294 aaKnown RBP eCLIP9.39□□□□□ -0.91
COL6A4P1-202ENST00000487147 MAGI3Q5TCQ9 1506 aa9.39□□□□□ -0.91
COL6A4P1-202ENST00000487147 GOLGA6L6A8MZA4 724 aa9.39□□□□□ -0.91
COL6A4P1-202ENST00000487147 NUTM2DQ5VT03 806 aaPredicted RBP9.39□□□□□ -0.91
COL6A4P1-202ENST00000487147 TMEM57Q8N5G2 664 aa9.39□□□□□ -0.91
COL6A4P1-202ENST00000487147 ERCC6Q03468 1493 aa9.39□□□□□ -0.91
COL6A4P1-202ENST00000487147 DIAPH1O60610 1272 aaKnown RBP9.38□□□□□ -0.91
COL6A4P1-202ENST00000487147 MBD3O95983 291 aa9.38□□□□□ -0.91
COL6A4P1-202ENST00000487147 KIAA0586Q9BVV6 1533 aa9.38□□□□□ -0.91
COL6A4P1-202ENST00000487147 RLBP1P12271 317 aa9.38□□□□□ -0.91
COL6A4P1-202ENST00000487147 TNNQ9UQP3 1299 aa9.38□□□□□ -0.91
COL6A4P1-202ENST00000487147 XPCQ01831 940 aaPredicted RBP9.38□□□□□ -0.91
COL6A4P1-202ENST00000487147 API5Q9BZZ5 524 aaKnown RBP9.38□□□□□ -0.91
COL6A4P1-202ENST00000487147 DNMT1P26358 1616 aaKnown RBP9.37□□□□□ -0.91
COL6A4P1-202ENST00000487147 KCNJ4P48050 445 aa9.37□□□□□ -0.91
COL6A4P1-202ENST00000487147 SSH1Q8WYL5 1049 aa9.37□□□□□ -0.91
COL6A4P1-202ENST00000487147 DENND4BO75064 1496 aaPredicted RBP9.37□□□□□ -0.91
COL6A4P1-202ENST00000487147 GPRASP1Q5JY77 1395 aa9.37□□□□□ -0.91
COL6A4P1-202ENST00000487147 GGNBP2Q9H3C7 697 aa9.37□□□□□ -0.91
COL6A4P1-202ENST00000487147 ARHGEF11O15085 1522 aa9.37□□□□□ -0.91
COL6A4P1-202ENST00000487147 PLB1Q6P1J6 1458 aa9.37□□□□□ -0.91
COL6A4P1-202ENST00000487147 TRIM27P14373 513 aa9.37□□□□□ -0.91
COL6A4P1-202ENST00000487147 ZRSR1Q15695 479 aaKnown RBP9.37□□□□□ -0.91
COL6A4P1-202ENST00000487147 SLC4A10Q6U841 1118 aa9.37□□□□□ -0.91
COL6A4P1-202ENST00000487147 CWC22Q9HCG8 908 aaKnown RBP9.37□□□□□ -0.91
COL6A4P1-202ENST00000487147 COL17A1Q9UMD9 1497 aaPredicted RBP9.36□□□□□ -0.91
COL6A4P1-202ENST00000487147 LMOD3Q0VAK6 560 aa9.36□□□□□ -0.91
COL6A4P1-202ENST00000487147 KDM5CP41229 1560 aa9.36□□□□□ -0.91
COL6A4P1-202ENST00000487147 KLHL40Q2TBA0 621 aa9.36□□□□□ -0.91
COL6A4P1-202ENST00000487147 URB2Q14146 1524 aaKnown RBP9.36□□□□□ -0.91
COL6A4P1-202ENST00000487147 HMGN5P82970 282 aaKnown RBP9.36□□□□□ -0.91
COL6A4P1-202ENST00000487147 BAG4O95429 457 aaKnown RBP9.35□□□□□ -0.91
COL6A4P1-202ENST00000487147 RILPL2Q969X0 211 aa9.35□□□□□ -0.91
COL6A4P1-202ENST00000487147 OS9Q13438 667 aaPredicted RBP9.35□□□□□ -0.91
COL6A4P1-202ENST00000487147 TMEM132EQ6IEE7 984 aa9.35□□□□□ -0.91
COL6A4P1-202ENST00000487147 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.35□□□□□ -0.91
COL6A4P1-202ENST00000487147 MPNDQ8N594 471 aa9.35□□□□□ -0.91
COL6A4P1-202ENST00000487147 TSPY26PQ9H489 355 aa9.35□□□□□ -0.91
COL6A4P1-202ENST00000487147 CCDC141Q6ZP82 1450 aa9.35□□□□□ -0.91
COL6A4P1-202ENST00000487147 SNX21Q969T3 373 aa9.35□□□□□ -0.91
COL6A4P1-202ENST00000487147 SAMD9Q5K651 1589 aa9.35□□□□□ -0.91
COL6A4P1-202ENST00000487147 ASXL1Q8IXJ9 1541 aa9.35□□□□□ -0.91
COL6A4P1-202ENST00000487147 NSD3Q9BZ95 1437 aa9.35□□□□□ -0.91
COL6A4P1-202ENST00000487147 FSD2A1L4K1 749 aa9.35□□□□□ -0.91
COL6A4P1-202ENST00000487147 NEK4P51957 841 aa9.35□□□□□ -0.91
COL6A4P1-202ENST00000487147 HDAC1Q13547 482 aaPredicted RBP9.35□□□□□ -0.91
COL6A4P1-202ENST00000487147 DMRT2Q9Y5R5 561 aa9.35□□□□□ -0.91
COL6A4P1-202ENST00000487147 ARHGAP5Q13017 1502 aa9.34□□□□□ -0.91
COL6A4P1-202ENST00000487147 PIK3C2GO75747 1445 aa9.34□□□□□ -0.91
COL6A4P1-202ENST00000487147 ABCA5Q8WWZ7 1642 aa9.34□□□□□ -0.91
COL6A4P1-202ENST00000487147 SYCE3A1L190 88 aa9.34□□□□□ -0.91
COL6A4P1-202ENST00000487147 BBXQ8WY36 941 aaPredicted RBP9.34□□□□□ -0.91
COL6A4P1-202ENST00000487147 ANTXR1Q9H6X2 564 aa9.34□□□□□ -0.91
COL6A4P1-202ENST00000487147 NUP153P49790 1475 aaKnown RBP9.34□□□□□ -0.91
COL6A4P1-202ENST00000487147 GNAI1P63096 354 aa9.34□□□□□ -0.91
COL6A4P1-202ENST00000487147 ANO2Q9NQ90 1003 aa9.34□□□□□ -0.91
COL6A4P1-202ENST00000487147 MAGI1Q96QZ7 1491 aaPredicted RBP9.34□□□□□ -0.91
COL6A4P1-202ENST00000487147 RAB3GAP1Q15042 981 aa9.34□□□□□ -0.91
COL6A4P1-202ENST00000487147 BMP2KLQ5H9B9 411 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms