RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 SETD1BQ9UPS6 1966 aaKnown RBP9.63□□□□□ -0.87
SF3A3-206ENST00000487062 DLC1Q96QB1 1528 aa9.63□□□□□ -0.87
SF3A3-206ENST00000487062 EID1Q9Y6B2 187 aa9.63□□□□□ -0.87
SF3A3-206ENST00000487062 KNDC1Q76NI1 1749 aa9.62□□□□□ -0.87
SF3A3-206ENST00000487062 SLIT1O75093 1534 aa9.62□□□□□ -0.87
SF3A3-206ENST00000487062 SPDYE4A6NLX3 237 aa9.62□□□□□ -0.87
SF3A3-206ENST00000487062 RALBP1Q15311 655 aa9.62□□□□□ -0.87
SF3A3-206ENST00000487062 VSIG10Q8N0Z9 540 aa9.62□□□□□ -0.87
SF3A3-206ENST00000487062 THEMISQ8N1K5 641 aaPredicted RBP9.62□□□□□ -0.87
SF3A3-206ENST00000487062 PUS7Q96PZ0 661 aaKnown RBP9.62□□□□□ -0.87
SF3A3-206ENST00000487062 ZNF219Q9P2Y4 722 aaPredicted RBP9.62□□□□□ -0.87
SF3A3-206ENST00000487062 CEP170BQ9Y4F5 1589 aaPredicted RBP9.62□□□□□ -0.87
SF3A3-206ENST00000487062 ZNF142P52746 1687 aaPredicted RBP9.61□□□□□ -0.87
SF3A3-206ENST00000487062 EVC2Q86UK5 1308 aa9.61□□□□□ -0.87
SF3A3-206ENST00000487062 ARHGAP23Q9P227 1491 aa9.61□□□□□ -0.87
SF3A3-206ENST00000487062 PANK3Q9H999 370 aa9.61□□□□□ -0.87
SF3A3-206ENST00000487062 POGKQ9P215 609 aa9.61□□□□□ -0.87
SF3A3-206ENST00000487062 STK26Q9P289 416 aa9.61□□□□□ -0.87
SF3A3-206ENST00000487062 LRPPRCP42704 1394 aaKnown RBP9.61□□□□□ -0.87
SF3A3-206ENST00000487062 PLEKHG1Q9ULL1 1385 aa9.61□□□□□ -0.87
SF3A3-206ENST00000487062 PTPRMP28827 1452 aa9.6□□□□□ -0.87
SF3A3-206ENST00000487062 TXNDC2Q86VQ3 553 aa9.6□□□□□ -0.87
SF3A3-206ENST00000487062 PER1O15534 1290 aaPredicted RBP9.59□□□□□ -0.87
SF3A3-206ENST00000487062 KNSTRNQ9Y448 316 aa9.59□□□□□ -0.87
SF3A3-206ENST00000487062 ABCC11Q96J66 1382 aa9.59□□□□□ -0.87
SF3A3-206ENST00000487062 DIP2AQ14689 1571 aa9.58□□□□□ -0.88
SF3A3-206ENST00000487062 TULP4Q9NRJ4 1543 aa9.58□□□□□ -0.88
SF3A3-206ENST00000487062 IFNLR1Q8IU57 520 aaPredicted RBP9.58□□□□□ -0.88
SF3A3-206ENST00000487062 PRAM1Q96QH2 718 aa9.58□□□□□ -0.88
SF3A3-206ENST00000487062 MRS2Q9HD23 443 aa9.58□□□□□ -0.88
SF3A3-206ENST00000487062 MYBBP1AQ9BQG0 1328 aaKnown RBP9.57□□□□□ -0.88
SF3A3-206ENST00000487062 CPS1P31327 1500 aa9.57□□□□□ -0.88
SF3A3-206ENST00000487062 SIRT1Q96EB6 747 aa9.57□□□□□ -0.88
SF3A3-206ENST00000487062 TECPR2O15040 1411 aa9.56□□□□□ -0.88
SF3A3-206ENST00000487062 FAM135BQ49AJ0 1406 aa9.56□□□□□ -0.88
SF3A3-206ENST00000487062 ADAMTS13Q76LX8 1427 aa9.56□□□□□ -0.88
SF3A3-206ENST00000487062 ATAD2Q6PL18 1390 aa9.56□□□□□ -0.88
SF3A3-206ENST00000487062 PARD3Q8TEW0 1356 aa9.56□□□□□ -0.88
SF3A3-206ENST00000487062 NPC1L1Q9UHC9 1359 aa9.56□□□□□ -0.88
SF3A3-206ENST00000487062 NINLQ9Y2I6 1382 aa9.56□□□□□ -0.88
SF3A3-206ENST00000487062 LTKP29376 864 aa9.56□□□□□ -0.88
SF3A3-206ENST00000487062 CNGB1Q14028 1251 aaPredicted RBP9.56□□□□□ -0.88
SF3A3-206ENST00000487062 POTEHQ6S545 545 aa9.56□□□□□ -0.88
SF3A3-206ENST00000487062 MED14O60244 1454 aa9.55□□□□□ -0.88
SF3A3-206ENST00000487062 BRD4O60885 1362 aaPredicted RBP9.55□□□□□ -0.88
SF3A3-206ENST00000487062 METP08581 1390 aa9.55□□□□□ -0.88
SF3A3-206ENST00000487062 SRPK2P78362 688 aaKnown RBP9.55□□□□□ -0.88
SF3A3-206ENST00000487062 MKRN4PQ13434 485 aaPredicted RBP9.55□□□□□ -0.88
SF3A3-206ENST00000487062 SAFB2Q14151 953 aaKnown RBP eCLIP9.55□□□□□ -0.88
SF3A3-206ENST00000487062 TMC1Q8TDI8 760 aa9.55□□□□□ -0.88
SF3A3-206ENST00000487062 TBX22Q9Y458 520 aa9.55□□□□□ -0.88
SF3A3-206ENST00000487062 MINK1Q8N4C8 1332 aaPredicted RBP9.55□□□□□ -0.88
SF3A3-206ENST00000487062 USP32Q8NFA0 1604 aa9.54□□□□□ -0.88
SF3A3-206ENST00000487062 CC2D1BQ5T0F9 858 aaKnown RBP9.54□□□□□ -0.88
SF3A3-206ENST00000487062 NLRP13Q86W25 1043 aa9.54□□□□□ -0.88
SF3A3-206ENST00000487062 ANKLE2Q86XL3 938 aa9.53□□□□□ -0.88
SF3A3-206ENST00000487062 ANKRD36BQ8N2N9 1353 aa9.52□□□□□ -0.88
SF3A3-206ENST00000487062 CCDC184Q52MB2 194 aa9.52□□□□□ -0.89
SF3A3-206ENST00000487062 FAM9BQ8IZU0 186 aa9.52□□□□□ -0.89
SF3A3-206ENST00000487062 CDK19Q9BWU1 502 aa9.52□□□□□ -0.89
SF3A3-206ENST00000487062 CABP2Q9NPB3 220 aa9.52□□□□□ -0.89
SF3A3-206ENST00000487062 PIK3R4Q99570 1358 aa9.51□□□□□ -0.89
SF3A3-206ENST00000487062 WAPLQ7Z5K2 1190 aa9.51□□□□□ -0.89
SF3A3-206ENST00000487062 SLC26A8Q96RN1 970 aa9.51□□□□□ -0.89
SF3A3-206ENST00000487062 SLC12A5Q9H2X9 1139 aa9.51□□□□□ -0.89
SF3A3-206ENST00000487062 TERF2IPQ9NYB0 399 aa9.51□□□□□ -0.89
SF3A3-206ENST00000487062 XRN1Q8IZH2 1706 aaKnown RBP9.51□□□□□ -0.89
SF3A3-206ENST00000487062 PLEKHH1Q9ULM0 1364 aa9.5□□□□□ -0.89
SF3A3-206ENST00000487062 ADGRB2O60241 1585 aa9.5□□□□□ -0.89
SF3A3-206ENST00000487062 NSD3Q9BZ95 1437 aa9.5□□□□□ -0.89
SF3A3-206ENST00000487062 DCAF8L1A6NGE4 600 aa9.5□□□□□ -0.89
SF3A3-206ENST00000487062 WASLO00401 505 aaPredicted RBP9.5□□□□□ -0.89
SF3A3-206ENST00000487062 HDGFL2Q7Z4V5 671 aaPredicted RBP9.5□□□□□ -0.89
SF3A3-206ENST00000487062 NSD2O96028 1365 aa9.5□□□□□ -0.89
SF3A3-206ENST00000487062 CHD2O14647 1828 aaKnown RBP9.49□□□□□ -0.89
SF3A3-206ENST00000487062 PTCH1Q13635 1447 aa9.49□□□□□ -0.89
SF3A3-206ENST00000487062 ANKRD26Q9UPS8 1709 aa9.49□□□□□ -0.89
SF3A3-206ENST00000487062 HNRNPUQ00839 825 aaKnown RBP eCLIP9.49□□□□□ -0.89
SF3A3-206ENST00000487062 CARD14Q9BXL6 1004 aa9.49□□□□□ -0.89
SF3A3-206ENST00000487062 AMOTL2Q9Y2J4 779 aa9.49□□□□□ -0.89
SF3A3-206ENST00000487062 CGNL1Q0VF96 1302 aa9.49□□□□□ -0.89
SF3A3-206ENST00000487062 ROBO2Q9HCK4 1378 aa9.49□□□□□ -0.89
SF3A3-206ENST00000487062 PTPRUQ92729 1446 aa9.48□□□□□ -0.89
SF3A3-206ENST00000487062 ITSN1Q15811 1721 aa9.48□□□□□ -0.89
SF3A3-206ENST00000487062 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.48□□□□□ -0.89
SF3A3-206ENST00000487062 ATP7BP35670 1465 aa9.48□□□□□ -0.89
SF3A3-206ENST00000487062 KIF20BQ96Q89 1820 aa9.48□□□□□ -0.89
SF3A3-206ENST00000487062 PNISRQ8TF01 805 aaKnown RBP9.48□□□□□ -0.89
SF3A3-206ENST00000487062 PPP2R1AP30153 589 aa9.47□□□□□ -0.89
SF3A3-206ENST00000487062 A0A1W2PP64 1363 aa9.47□□□□□ -0.89
SF3A3-206ENST00000487062 NPHP4O75161 1426 aaPredicted RBP9.47□□□□□ -0.89
SF3A3-206ENST00000487062 AKAP12Q02952 1782 aa9.46□□□□□ -0.9
SF3A3-206ENST00000487062 MORC1Q86VD1 984 aa9.46□□□□□ -0.9
SF3A3-206ENST00000487062 NUDT16Q96DE0 195 aaKnown RBP9.45□□□□□ -0.9
SF3A3-206ENST00000487062 CABP1Q9NZU7 370 aa9.45□□□□□ -0.9
SF3A3-206ENST00000487062 CCDC61Q9Y6R9 512 aa9.45□□□□□ -0.9
SF3A3-206ENST00000487062 INSRP06213 1382 aa9.45□□□□□ -0.9
SF3A3-206ENST00000487062 PPIP5K1Q6PFW1 1433 aa9.45□□□□□ -0.9
SF3A3-206ENST00000487062 CD163L1Q9NR16 1453 aa9.45□□□□□ -0.9
SF3A3-206ENST00000487062 CDC42BPGQ6DT37 1551 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms