RNA–Protein interactions for RNA: ENST00000487002.1

FDPS-212, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 2,017 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-212ENST00000487002 ANKRD36BQ8N2N9 1353 aa22.34■■□□□ 1.17
FDPS-212ENST00000487002 DUSP27Q5VZP5 1158 aa22.33■■□□□ 1.17
FDPS-212ENST00000487002 PTPRMP28827 1452 aa22.31■■□□□ 1.16
FDPS-212ENST00000487002 CGNL1Q0VF96 1302 aa22.31■■□□□ 1.16
FDPS-212ENST00000487002 SLC12A5Q9H2X9 1139 aa22.31■■□□□ 1.16
FDPS-212ENST00000487002 SPATA31D1Q6ZQQ2 1576 aa22.31■■□□□ 1.16
FDPS-212ENST00000487002 MORC1Q86VD1 984 aa22.3■■□□□ 1.16
FDPS-212ENST00000487002 SLFN5Q08AF3 891 aa22.29■■□□□ 1.16
FDPS-212ENST00000487002 TRMT2AQ8IZ69 625 aaKnown RBP22.29■■□□□ 1.16
FDPS-212ENST00000487002 ARHGEF40Q8TER5 1519 aa22.28■■□□□ 1.16
FDPS-212ENST00000487002 NUTM2DQ5VT03 806 aaPredicted RBP22.28■■□□□ 1.16
FDPS-212ENST00000487002 ALKQ9UM73 1620 aa22.28■■□□□ 1.16
FDPS-212ENST00000487002 YTHDC2Q9H6S0 1430 aaKnown RBP22.27■■□□□ 1.16
FDPS-212ENST00000487002 ANKRD26Q9UPS8 1709 aa22.27■■□□□ 1.16
FDPS-212ENST00000487002 NKTRP30414 1462 aaKnown RBP22.27■■□□□ 1.15
FDPS-212ENST00000487002 APAF1O14727 1248 aa22.25■■□□□ 1.15
FDPS-212ENST00000487002 CCDC146Q8IYE0 955 aa22.25■■□□□ 1.15
FDPS-212ENST00000487002 ATAD2Q6PL18 1390 aa22.24■■□□□ 1.15
FDPS-212ENST00000487002 IQSEC2Q5JU85 1478 aa22.24■■□□□ 1.15
FDPS-212ENST00000487002 E9PSI1 815 aa22.23■■□□□ 1.15
FDPS-212ENST00000487002 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.23■■□□□ 1.15
FDPS-212ENST00000487002 KIF13AQ9H1H9 1805 aa22.23■■□□□ 1.15
FDPS-212ENST00000487002 DLC1Q96QB1 1528 aa22.23■■□□□ 1.15
FDPS-212ENST00000487002 ABCC11Q96J66 1382 aa22.23■■□□□ 1.15
FDPS-212ENST00000487002 SETD1AO15047 1707 aaKnown RBP22.22■■□□□ 1.15
FDPS-212ENST00000487002 MSH5O43196 834 aa22.21■■□□□ 1.15
FDPS-212ENST00000487002 PLIN1O60240 522 aa22.21■■□□□ 1.15
FDPS-212ENST00000487002 A2ML1A8K2U0 1454 aa22.21■■□□□ 1.15
FDPS-212ENST00000487002 MED14O60244 1454 aa22.21■■□□□ 1.15
FDPS-212ENST00000487002 CRBNQ96SW2 442 aa22.21■■□□□ 1.15
FDPS-212ENST00000487002 FBXO31Q5XUX0 539 aaPredicted RBP22.2■■□□□ 1.14
FDPS-212ENST00000487002 CFAP53Q96M91 514 aa22.2■■□□□ 1.14
FDPS-212ENST00000487002 TCERG1O14776 1098 aaKnown RBP22.19■■□□□ 1.14
FDPS-212ENST00000487002 A0A1W2PP64 1363 aa22.19■■□□□ 1.14
FDPS-212ENST00000487002 NCBP3Q53F19 620 aaKnown RBP22.18■■□□□ 1.14
FDPS-212ENST00000487002 CABP2Q9NPB3 220 aa22.18■■□□□ 1.14
FDPS-212ENST00000487002 RUNDC1Q96C34 613 aa22.17■■□□□ 1.14
FDPS-212ENST00000487002 ADGRB2O60241 1585 aa22.16■■□□□ 1.14
FDPS-212ENST00000487002 MS4A1P11836 297 aa22.15■■□□□ 1.14
FDPS-212ENST00000487002 STK26Q9P289 416 aa22.15■■□□□ 1.14
FDPS-212ENST00000487002 KIF20BQ96Q89 1820 aa22.15■■□□□ 1.14
FDPS-212ENST00000487002 CD163L1Q9NR16 1453 aa22.15■■□□□ 1.14
FDPS-212ENST00000487002 MTHFSP49914 203 aa22.14■■□□□ 1.14
FDPS-212ENST00000487002 SRPK2P78362 688 aaKnown RBP22.14■■□□□ 1.14
FDPS-212ENST00000487002 PRAM1Q96QH2 718 aa22.14■■□□□ 1.14
FDPS-212ENST00000487002 STAG3Q9UJ98 1225 aa22.14■■□□□ 1.14
FDPS-212ENST00000487002 RIMS2Q9UQ26 1411 aa22.14■■□□□ 1.13
FDPS-212ENST00000487002 WWC1Q8IX03 1113 aa22.13■■□□□ 1.13
FDPS-212ENST00000487002 SPINK5Q9NQ38 1064 aaPredicted RBP22.13■■□□□ 1.13
FDPS-212ENST00000487002 TERF2IPQ9NYB0 399 aa22.13■■□□□ 1.13
FDPS-212ENST00000487002 PHF23Q9BUL5 403 aaPredicted RBP22.13■■□□□ 1.13
FDPS-212ENST00000487002 POGKQ9P215 609 aa22.13■■□□□ 1.13
FDPS-212ENST00000487002 TNNT2P45379 298 aaPredicted RBP22.12■■□□□ 1.13
FDPS-212ENST00000487002 SAFB2Q14151 953 aaKnown RBP eCLIP22.12■■□□□ 1.13
FDPS-212ENST00000487002 C20orf194Q5TEA3 1177 aa22.12■■□□□ 1.13
FDPS-212ENST00000487002 NLRP1Q9C000 1473 aa22.12■■□□□ 1.13
FDPS-212ENST00000487002 CCDC27Q2M243 656 aa22.11■■□□□ 1.13
FDPS-212ENST00000487002 NRXN3Q9Y4C0 1643 aa22.11■■□□□ 1.13
FDPS-212ENST00000487002 KNDC1Q76NI1 1749 aa22.1■■□□□ 1.13
FDPS-212ENST00000487002 COL3A1P02461 1466 aaPredicted RBP22.1■■□□□ 1.13
FDPS-212ENST00000487002 MINK1Q8N4C8 1332 aaPredicted RBP22.09■■□□□ 1.13
FDPS-212ENST00000487002 ATP7BP35670 1465 aa22.09■■□□□ 1.13
FDPS-212ENST00000487002 KDM2BQ8NHM5 1336 aa22.08■■□□□ 1.13
FDPS-212ENST00000487002 WDR63Q8IWG1 891 aa22.08■■□□□ 1.13
FDPS-212ENST00000487002 ERICH6Q7L0X2 663 aa22.07■■□□□ 1.12
FDPS-212ENST00000487002 CENPQQ7L2Z9 268 aaPredicted RBP22.07■■□□□ 1.12
FDPS-212ENST00000487002 TCP11L2Q8N4U5 519 aa22.07■■□□□ 1.12
FDPS-212ENST00000487002 DMRT2Q9Y5R5 561 aa22.07■■□□□ 1.12
FDPS-212ENST00000487002 ANP32AP39687 249 aaKnown RBP22.06■■□□□ 1.12
FDPS-212ENST00000487002 HDGFL2Q7Z4V5 671 aaPredicted RBP22.05■■□□□ 1.12
FDPS-212ENST00000487002 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.04■■□□□ 1.12
FDPS-212ENST00000487002 CDK19Q9BWU1 502 aa22.04■■□□□ 1.12
FDPS-212ENST00000487002 PDE3AQ14432 1141 aa22.02■■□□□ 1.12
FDPS-212ENST00000487002 CDC42BPGQ6DT37 1551 aa22.02■■□□□ 1.12
FDPS-212ENST00000487002 ZMYM3Q14202 1370 aa22.02■■□□□ 1.12
FDPS-212ENST00000487002 FYB1O15117 783 aa22.01■■□□□ 1.11
FDPS-212ENST00000487002 TECPR2O15040 1411 aa22■■□□□ 1.11
FDPS-212ENST00000487002 PDE4AP27815 886 aa22■■□□□ 1.11
FDPS-212ENST00000487002 BACH2Q9BYV9 841 aa22■■□□□ 1.11
FDPS-212ENST00000487002 CPS1P31327 1500 aa22■■□□□ 1.11
FDPS-212ENST00000487002 UBR1Q8IWV7 1749 aa21.99■■□□□ 1.11
FDPS-212ENST00000487002 BCAR3O75815 825 aa21.99■■□□□ 1.11
FDPS-212ENST00000487002 U2AF1L5P0DN76 240 aaPredicted RBP21.99■■□□□ 1.11
FDPS-212ENST00000487002 U2AF1Q01081 240 aaKnown RBP eCLIP21.99■■□□□ 1.11
FDPS-212ENST00000487002 GGNBP2Q9H3C7 697 aa21.99■■□□□ 1.11
FDPS-212ENST00000487002 FAM135BQ49AJ0 1406 aa21.99■■□□□ 1.11
FDPS-212ENST00000487002 PNPLA6Q8IY17 1366 aa21.99■■□□□ 1.11
FDPS-212ENST00000487002 ESF1Q9H501 851 aaKnown RBP21.99■■□□□ 1.11
FDPS-212ENST00000487002 MLECQ14165 292 aa21.98■■□□□ 1.11
FDPS-212ENST00000487002 IPO9Q96P70 1041 aaKnown RBP21.97■■□□□ 1.11
FDPS-212ENST00000487002 SENP3Q9H4L4 574 aaPredicted RBP21.97■■□□□ 1.11
FDPS-212ENST00000487002 NOP58Q9Y2X3 529 aaKnown RBP21.97■■□□□ 1.11
FDPS-212ENST00000487002 RRP7AQ9Y3A4 280 aaKnown RBP21.97■■□□□ 1.11
FDPS-212ENST00000487002 MYH16Q9H6N6 1097 aa21.97■■□□□ 1.11
FDPS-212ENST00000487002 HDGFP51858 240 aaKnown RBP21.96■■□□□ 1.11
FDPS-212ENST00000487002 SIRT1Q96EB6 747 aa21.96■■□□□ 1.11
FDPS-212ENST00000487002 TNRQ92752 1358 aa21.96■■□□□ 1.11
FDPS-212ENST00000487002 NEUROD2Q15784 382 aa21.96■■□□□ 1.11
FDPS-212ENST00000487002 CABP1Q9NZU7 370 aa21.96■■□□□ 1.11
FDPS-212ENST00000487002 AAMPQ13685 434 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms