RNA–Protein interactions for RNA: ENST00000486911.2

C9orf85-206, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 5 BASIC

Gene C9orf85, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-206ENST00000486911 CDCA8Q53HL2 280 aa12.81□□□□□ -0.36
C9orf85-206ENST00000486911 CAVIN1Q6NZI2 390 aaKnown RBP12.81□□□□□ -0.36
C9orf85-206ENST00000486911 NGEFQ8N5V2 710 aa12.81□□□□□ -0.36
C9orf85-206ENST00000486911 PDS5BQ9NTI5 1447 aa12.81□□□□□ -0.36
C9orf85-206ENST00000486911 NCOA3Q9Y6Q9 1424 aa12.81□□□□□ -0.36
C9orf85-206ENST00000486911 RBM42Q9BTD8 480 aaKnown RBP12.81□□□□□ -0.36
C9orf85-206ENST00000486911 NOL7Q9UMY1 257 aaKnown RBP12.81□□□□□ -0.36
C9orf85-206ENST00000486911 KLHL40Q2TBA0 621 aa12.8□□□□□ -0.36
C9orf85-206ENST00000486911 RBM25P49756 843 aaKnown RBP12.8□□□□□ -0.36
C9orf85-206ENST00000486911 DZIP1LQ8IYY4 767 aaKnown RBP12.8□□□□□ -0.36
C9orf85-206ENST00000486911 TCP11L2Q8N4U5 519 aa12.8□□□□□ -0.36
C9orf85-206ENST00000486911 BAG4O95429 457 aaKnown RBP12.79□□□□□ -0.36
C9orf85-206ENST00000486911 MCTP1Q6DN14 999 aa12.79□□□□□ -0.36
C9orf85-206ENST00000486911 RBSNQ9H1K0 784 aa12.79□□□□□ -0.36
C9orf85-206ENST00000486911 PRDM15P57071 1507 aaPredicted RBP12.79□□□□□ -0.36
C9orf85-206ENST00000486911 DYNC1I1O14576 645 aa12.79□□□□□ -0.36
C9orf85-206ENST00000486911 ZNF500O60304 480 aaPredicted RBP12.79□□□□□ -0.36
C9orf85-206ENST00000486911 ZKSCAN2Q63HK3 967 aa12.79□□□□□ -0.36
C9orf85-206ENST00000486911 ITPRIPQ8IWB1 547 aa12.79□□□□□ -0.36
C9orf85-206ENST00000486911 LNPKQ9C0E8 428 aa12.79□□□□□ -0.36
C9orf85-206ENST00000486911 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.79□□□□□ -0.36
C9orf85-206ENST00000486911 MTERF4Q7Z6M4 381 aaKnown RBP12.78□□□□□ -0.36
C9orf85-206ENST00000486911 GAS2L2Q8NHY3 880 aa12.78□□□□□ -0.36
C9orf85-206ENST00000486911 ASXL1Q8IXJ9 1541 aa12.78□□□□□ -0.36
C9orf85-206ENST00000486911 ABCC2Q92887 1545 aa12.78□□□□□ -0.36
C9orf85-206ENST00000486911 K7ELQ4 463 aaPredicted RBP12.78□□□□□ -0.36
C9orf85-206ENST00000486911 EIF4G3O43432 1585 aaKnown RBP12.78□□□□□ -0.36
C9orf85-206ENST00000486911 PTPRGP23470 1445 aa12.77□□□□□ -0.36
C9orf85-206ENST00000486911 ZSCAN23Q3MJ62 389 aa12.77□□□□□ -0.37
C9orf85-206ENST00000486911 HS1BP3Q53T59 392 aa12.77□□□□□ -0.37
C9orf85-206ENST00000486911 ZKSCAN5Q9Y2L8 839 aa12.77□□□□□ -0.37
C9orf85-206ENST00000486911 PRIM1P49642 420 aaKnown RBP12.76□□□□□ -0.37
C9orf85-206ENST00000486911 CSPP1Q1MSJ5 1256 aa12.76□□□□□ -0.37
C9orf85-206ENST00000486911 BCL11BQ9C0K0 894 aaPredicted RBP12.76□□□□□ -0.37
C9orf85-206ENST00000486911 PLA2R1Q13018 1463 aa12.75□□□□□ -0.37
C9orf85-206ENST00000486911 PLEKHD1A6NEE1 506 aa12.75□□□□□ -0.37
C9orf85-206ENST00000486911 SASS6Q6UVJ0 657 aa12.75□□□□□ -0.37
C9orf85-206ENST00000486911 JARID2Q92833 1246 aaPredicted RBP12.75□□□□□ -0.37
C9orf85-206ENST00000486911 RUNDC1Q96C34 613 aa12.75□□□□□ -0.37
C9orf85-206ENST00000486911 KIF2CQ99661 725 aa12.75□□□□□ -0.37
C9orf85-206ENST00000486911 SMC4Q9NTJ3 1288 aa12.75□□□□□ -0.37
C9orf85-206ENST00000486911 FAM135AQ9P2D6 1515 aa12.75□□□□□ -0.37
C9orf85-206ENST00000486911 ZNF445P59923 1031 aa12.75□□□□□ -0.37
C9orf85-206ENST00000486911 HDAC1Q13547 482 aaPredicted RBP12.75□□□□□ -0.37
C9orf85-206ENST00000486911 TSC1Q92574 1164 aa12.75□□□□□ -0.37
C9orf85-206ENST00000486911 RBM27Q9P2N5 1060 aaKnown RBP12.75□□□□□ -0.37
C9orf85-206ENST00000486911 DNTTIP2Q5QJE6 756 aaKnown RBP12.74□□□□□ -0.37
C9orf85-206ENST00000486911 CCDC94Q9BW85 323 aaPredicted RBP12.74□□□□□ -0.37
C9orf85-206ENST00000486911 DMTNQ08495 405 aa12.73□□□□□ -0.37
C9orf85-206ENST00000486911 TSR2Q969E8 191 aaKnown RBP12.73□□□□□ -0.37
C9orf85-206ENST00000486911 PDLIM2Q96JY6 352 aa12.73□□□□□ -0.37
C9orf85-206ENST00000486911 CARD14Q9BXL6 1004 aa12.73□□□□□ -0.37
C9orf85-206ENST00000486911 PTMAP06454 111 aaKnown RBP12.73□□□□□ -0.37
C9orf85-206ENST00000486911 TRIM27P14373 513 aa12.73□□□□□ -0.37
C9orf85-206ENST00000486911 CBX1P83916 185 aa12.73□□□□□ -0.37
C9orf85-206ENST00000486911 WDR63Q8IWG1 891 aa12.73□□□□□ -0.37
C9orf85-206ENST00000486911 RNF214Q8ND24 703 aa12.73□□□□□ -0.37
C9orf85-206ENST00000486911 IBTKQ9P2D0 1353 aaPredicted RBP12.73□□□□□ -0.37
C9orf85-206ENST00000486911 MPNDQ8N594 471 aa12.72□□□□□ -0.37
C9orf85-206ENST00000486911 PRPF40AO75400 957 aaKnown RBP12.72□□□□□ -0.37
C9orf85-206ENST00000486911 ZSCAN20P17040 1043 aaPredicted RBP12.72□□□□□ -0.37
C9orf85-206ENST00000486911 DDX19BQ9UMR2 479 aa12.72□□□□□ -0.37
C9orf85-206ENST00000486911 NPC1L1Q9UHC9 1359 aa12.72□□□□□ -0.37
C9orf85-206ENST00000486911 ABCC10Q5T3U5 1492 aa12.72□□□□□ -0.37
C9orf85-206ENST00000486911 PLB1Q6P1J6 1458 aa12.72□□□□□ -0.37
C9orf85-206ENST00000486911 RAPGEF6Q8TEU7 1601 aa12.71□□□□□ -0.37
C9orf85-206ENST00000486911 CROCC2H7BZ55 1655 aa12.71□□□□□ -0.37
C9orf85-206ENST00000486911 DISP1Q96F81 1524 aa12.71□□□□□ -0.37
C9orf85-206ENST00000486911 LMBRD1Q9NUN5 540 aa12.71□□□□□ -0.37
C9orf85-206ENST00000486911 ITSN2Q9NZM3 1697 aa12.71□□□□□ -0.37
C9orf85-206ENST00000486911 MORC1Q86VD1 984 aa12.71□□□□□ -0.38
C9orf85-206ENST00000486911 CCDC39Q9UFE4 941 aa12.71□□□□□ -0.38
C9orf85-206ENST00000486911 PKP1Q13835 747 aa12.7□□□□□ -0.38
C9orf85-206ENST00000486911 UTP14CQ5TAP6 766 aaKnown RBP12.7□□□□□ -0.38
C9orf85-206ENST00000486911 CHD1LQ86WJ1 897 aa12.7□□□□□ -0.38
C9orf85-206ENST00000486911 CCDC141Q6ZP82 1450 aa12.7□□□□□ -0.38
C9orf85-206ENST00000486911 SCAPERQ9BY12 1400 aa12.7□□□□□ -0.38
C9orf85-206ENST00000486911 NUCB1Q02818 461 aa12.7□□□□□ -0.38
C9orf85-206ENST00000486911 ANKRD45Q5TZF3 282 aa12.7□□□□□ -0.38
C9orf85-206ENST00000486911 TMEM57Q8N5G2 664 aa12.7□□□□□ -0.38
C9orf85-206ENST00000486911 PLXNC1O60486 1568 aa12.69□□□□□ -0.38
C9orf85-206ENST00000486911 SYCE3A1L190 88 aa12.69□□□□□ -0.38
C9orf85-206ENST00000486911 FAM177BA6PVY3 158 aa12.69□□□□□ -0.38
C9orf85-206ENST00000486911 EXOSC9Q06265 439 aaKnown RBP12.69□□□□□ -0.38
C9orf85-206ENST00000486911 CLEC17AQ6ZS10 378 aa12.69□□□□□ -0.38
C9orf85-206ENST00000486911 TBC1D9Q6ZT07 1266 aa12.69□□□□□ -0.38
C9orf85-206ENST00000486911 SSH1Q8WYL5 1049 aa12.69□□□□□ -0.38
C9orf85-206ENST00000486911 CHAMP1Q96JM3 812 aa12.69□□□□□ -0.38
C9orf85-206ENST00000486911 SHANK2Q9UPX8 1470 aa12.69□□□□□ -0.38
C9orf85-206ENST00000486911 NUP160Q12769 1436 aa12.69□□□□□ -0.38
C9orf85-206ENST00000486911 MCM5P33992 734 aa12.69□□□□□ -0.38
C9orf85-206ENST00000486911 NOB1Q9ULX3 412 aaKnown RBP12.69□□□□□ -0.38
C9orf85-206ENST00000486911 FOXD4L5Q5VV16 416 aaPredicted RBP12.68□□□□□ -0.38
C9orf85-206ENST00000486911 FOXD4L4Q8WXT5 416 aaPredicted RBP12.68□□□□□ -0.38
C9orf85-206ENST00000486911 BBXQ8WY36 941 aaPredicted RBP12.68□□□□□ -0.38
C9orf85-206ENST00000486911 KIF16BQ96L93 1317 aa12.68□□□□□ -0.38
C9orf85-206ENST00000486911 ADCY10Q96PN6 1610 aa12.68□□□□□ -0.38
C9orf85-206ENST00000486911 ATF7IPQ6VMQ6 1270 aa12.68□□□□□ -0.38
C9orf85-206ENST00000486911 NUCB2P80303 420 aa12.68□□□□□ -0.38
C9orf85-206ENST00000486911 BMP2KLQ5H9B9 411 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms