RNA–Protein interactions for RNA: ENST00000486837.1

LMBR1-218, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-218ENST00000486837 NUTM2DQ5VT03 806 aaPredicted RBP9.98□□□□□ -0.81
LMBR1-218ENST00000486837 FBXO31Q5XUX0 539 aaPredicted RBP9.98□□□□□ -0.81
LMBR1-218ENST00000486837 NUTM2AQ8IVF1 878 aaPredicted RBP9.98□□□□□ -0.81
LMBR1-218ENST00000486837 Q3C1V9 767 aa9.97□□□□□ -0.81
LMBR1-218ENST00000486837 PUS10Q3MIT2 529 aaKnown RBP9.97□□□□□ -0.81
LMBR1-218ENST00000486837 CABLES1Q8TDN4 633 aa9.97□□□□□ -0.81
LMBR1-218ENST00000486837 PCDHB3Q9Y5E6 796 aa9.97□□□□□ -0.81
LMBR1-218ENST00000486837 RTL5Q5HYW3 569 aaPredicted RBP9.96□□□□□ -0.82
LMBR1-218ENST00000486837 SLC27A5Q9Y2P5 690 aa9.96□□□□□ -0.82
LMBR1-218ENST00000486837 SALL2Q9Y467 1007 aaPredicted RBP9.96□□□□□ -0.82
LMBR1-218ENST00000486837 MCM6Q14566 821 aa9.95□□□□□ -0.82
LMBR1-218ENST00000486837 MYT1LQ9UL68 1186 aa9.95□□□□□ -0.82
LMBR1-218ENST00000486837 C6orf229H3BNL8 230 aa9.94□□□□□ -0.82
LMBR1-218ENST00000486837 NR1I2O75469 434 aa9.94□□□□□ -0.82
LMBR1-218ENST00000486837 SOCS7O14512 581 aa9.93□□□□□ -0.82
LMBR1-218ENST00000486837 RETREG3Q86VR2 466 aa9.93□□□□□ -0.82
LMBR1-218ENST00000486837 BLOC1S3Q6QNY0 202 aa9.91□□□□□ -0.82
LMBR1-218ENST00000486837 SCUBE3Q8IX30 993 aa9.91□□□□□ -0.82
LMBR1-218ENST00000486837 HELBQ8NG08 1087 aaPredicted RBP9.91□□□□□ -0.82
LMBR1-218ENST00000486837 AP1G2O75843 785 aa9.9□□□□□ -0.82
LMBR1-218ENST00000486837 FMNL1O95466 1100 aaPredicted RBP9.9□□□□□ -0.82
LMBR1-218ENST00000486837 BRICD5Q6PL45 260 aa9.9□□□□□ -0.82
LMBR1-218ENST00000486837 SYMPKQ92797 1274 aaKnown RBP9.9□□□□□ -0.82
LMBR1-218ENST00000486837 ZMYND15Q9H091 742 aa9.9□□□□□ -0.82
LMBR1-218ENST00000486837 PTPN5P54829 565 aa9.89□□□□□ -0.83
LMBR1-218ENST00000486837 THAP11Q96EK4 314 aa9.89□□□□□ -0.83
LMBR1-218ENST00000486837 CFAP99D6REC4 459 aa9.88□□□□□ -0.83
LMBR1-218ENST00000486837 APBB1O00213 710 aa9.88□□□□□ -0.83
LMBR1-218ENST00000486837 USP17L8P0C7I0 530 aa9.88□□□□□ -0.83
LMBR1-218ENST00000486837 UBTFP17480 764 aaKnown RBP9.88□□□□□ -0.83
LMBR1-218ENST00000486837 DESI1Q6ICB0 168 aa9.88□□□□□ -0.83
LMBR1-218ENST00000486837 RNF19BQ6ZMZ0 732 aa9.88□□□□□ -0.83
LMBR1-218ENST00000486837 PRR7Q8TB68 274 aa9.88□□□□□ -0.83
LMBR1-218ENST00000486837 USB1Q9BQ65 265 aaKnown RBP9.88□□□□□ -0.83
LMBR1-218ENST00000486837 SNRKQ9NRH2 765 aa9.88□□□□□ -0.83
LMBR1-218ENST00000486837 COPS2P61201 443 aa9.86□□□□□ -0.83
LMBR1-218ENST00000486837 SPNS2Q8IVW8 549 aa9.86□□□□□ -0.83
LMBR1-218ENST00000486837 A6NJR5 290 aa9.85□□□□□ -0.83
LMBR1-218ENST00000486837 CTDSPL2Q05D32 466 aa9.85□□□□□ -0.83
LMBR1-218ENST00000486837 MTMR14Q8NCE2 650 aa9.85□□□□□ -0.83
LMBR1-218ENST00000486837 RNF166Q96A37 237 aaPredicted RBP9.85□□□□□ -0.83
LMBR1-218ENST00000486837 MSS51Q4VC12 460 aa9.84□□□□□ -0.83
LMBR1-218ENST00000486837 TSC1Q92574 1164 aa9.84□□□□□ -0.83
LMBR1-218ENST00000486837 MTRQ99707 1265 aa9.84□□□□□ -0.83
LMBR1-218ENST00000486837 IL21Q9HBE4 155 aa9.84□□□□□ -0.83
LMBR1-218ENST00000486837 RAD21O60216 631 aa9.83□□□□□ -0.84
LMBR1-218ENST00000486837 ZPR1O75312 459 aa9.83□□□□□ -0.84
LMBR1-218ENST00000486837 PRM3Q9NNZ6 103 aa9.83□□□□□ -0.84
LMBR1-218ENST00000486837 HCSTQ9UBK5 93 aa9.83□□□□□ -0.84
LMBR1-218ENST00000486837 TJAP1Q5JTD0 557 aa9.82□□□□□ -0.84
LMBR1-218ENST00000486837 SPSB2Q99619 263 aa9.82□□□□□ -0.84
LMBR1-218ENST00000486837 ADH1BP00325 375 aa9.81□□□□□ -0.84
LMBR1-218ENST00000486837 JUNDP17535 347 aa9.81□□□□□ -0.84
LMBR1-218ENST00000486837 LYPD8Q6UX82 237 aa9.81□□□□□ -0.84
LMBR1-218ENST00000486837 COG6Q9Y2V7 657 aa9.8□□□□□ -0.84
LMBR1-218ENST00000486837 CLUAP1Q96AJ1 413 aa9.79□□□□□ -0.84
LMBR1-218ENST00000486837 GJD4Q96KN9 370 aaPredicted RBP9.79□□□□□ -0.84
LMBR1-218ENST00000486837 MMP16P51512 607 aa9.78□□□□□ -0.84
LMBR1-218ENST00000486837 FAM160A2Q8N612 972 aaPredicted RBP9.78□□□□□ -0.84
LMBR1-218ENST00000486837 LRRN4Q8WUT4 740 aa9.78□□□□□ -0.84
LMBR1-218ENST00000486837 HMX1Q9NP08 348 aaPredicted RBP9.78□□□□□ -0.84
LMBR1-218ENST00000486837 TLL1O43897 1013 aa9.77□□□□□ -0.85
LMBR1-218ENST00000486837 DXOO77932 396 aaKnown RBP9.77□□□□□ -0.85
LMBR1-218ENST00000486837 PTPRNQ16849 979 aa9.77□□□□□ -0.85
LMBR1-218ENST00000486837 PROSER2Q86WR7 435 aaPredicted RBP9.77□□□□□ -0.85
LMBR1-218ENST00000486837 POM121Q96HA1 1249 aa9.77□□□□□ -0.85
LMBR1-218ENST00000486837 NDUFB9Q9Y6M9 179 aa9.77□□□□□ -0.85
LMBR1-218ENST00000486837 PER1O15534 1290 aaPredicted RBP9.76□□□□□ -0.85
LMBR1-218ENST00000486837 ZNF516Q92618 1163 aa9.76□□□□□ -0.85
LMBR1-218ENST00000486837 TRIM34Q9BYJ4 488 aa9.76□□□□□ -0.85
LMBR1-218ENST00000486837 GDPD2Q9HCC8 539 aa9.75□□□□□ -0.85
LMBR1-218ENST00000486837 TRAK2O60296 914 aa9.74□□□□□ -0.85
LMBR1-218ENST00000486837 ITGBL1O95965 494 aaPredicted RBP9.74□□□□□ -0.85
LMBR1-218ENST00000486837 WWC1Q8IX03 1113 aa9.74□□□□□ -0.85
LMBR1-218ENST00000486837 FNBP4Q8N3X1 1017 aaPredicted RBP9.74□□□□□ -0.85
LMBR1-218ENST00000486837 SLC6A16Q9GZN6 736 aa9.74□□□□□ -0.85
LMBR1-218ENST00000486837 F12P00748 615 aaPredicted RBP9.73□□□□□ -0.85
LMBR1-218ENST00000486837 TBC1D2BQ9UPU7 963 aa9.73□□□□□ -0.85
LMBR1-218ENST00000486837 CCNYL3P0C7X3 344 aa9.72□□□□□ -0.85
LMBR1-218ENST00000486837 KCNC4Q03721 635 aa9.72□□□□□ -0.85
LMBR1-218ENST00000486837 NR6A1Q15406 480 aa9.72□□□□□ -0.85
LMBR1-218ENST00000486837 PNMA1Q8ND90 353 aa9.72□□□□□ -0.85
LMBR1-218ENST00000486837 NUDT12Q9BQG2 462 aa9.72□□□□□ -0.85
LMBR1-218ENST00000486837 PRDM9Q9NQV7 894 aa9.72□□□□□ -0.85
LMBR1-218ENST00000486837 MMRN1Q13201 1228 aa9.71□□□□□ -0.86
LMBR1-218ENST00000486837 EVA1BQ9NVM1 165 aa9.71□□□□□ -0.86
LMBR1-218ENST00000486837 SUPT5HO00267 1087 aaKnown RBP9.7□□□□□ -0.86
LMBR1-218ENST00000486837 ABL2P42684 1182 aa9.7□□□□□ -0.86
LMBR1-218ENST00000486837 EPS8L1Q8TE68 723 aa9.7□□□□□ -0.86
LMBR1-218ENST00000486837 KCNH2Q12809 1159 aa9.69□□□□□ -0.86
LMBR1-218ENST00000486837 NKX2-3Q8TAU0 364 aa9.69□□□□□ -0.86
LMBR1-218ENST00000486837 ZC3H4Q9UPT8 1303 aaKnown RBP9.68□□□□□ -0.86
LMBR1-218ENST00000486837 GPR37L1O60883 481 aa9.68□□□□□ -0.86
LMBR1-218ENST00000486837 S1PR4O95977 384 aa9.67□□□□□ -0.86
LMBR1-218ENST00000486837 CTHP32929 405 aa9.67□□□□□ -0.86
LMBR1-218ENST00000486837 WASHC4Q2M389 1173 aa9.67□□□□□ -0.86
LMBR1-218ENST00000486837 ARMC2Q8NEN0 867 aa9.67□□□□□ -0.86
LMBR1-218ENST00000486837 MAP10Q9P2G4 905 aa9.67□□□□□ -0.86
LMBR1-218ENST00000486837 ZNF330Q9Y3S2 320 aaPredicted RBP9.67□□□□□ -0.86
LMBR1-218ENST00000486837 IRF5Q13568 498 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms