RNA–Protein interactions for RNA: ENST00000486596.5

NECTIN3-208, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 5

Gene NECTIN3, Length 732 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-208ENST00000486596 FOSBP53539 338 aa9.85□□□□□ -0.83
NECTIN3-208ENST00000486596 CDC42BPAQ5VT25 1732 aa9.85□□□□□ -0.83
NECTIN3-208ENST00000486596 SAMD9LQ8IVG5 1584 aa9.84□□□□□ -0.83
NECTIN3-208ENST00000486596 BCL2L12Q9HB09 334 aa9.84□□□□□ -0.83
NECTIN3-208ENST00000486596 SPATA31D1Q6ZQQ2 1576 aa9.84□□□□□ -0.83
NECTIN3-208ENST00000486596 SYCP2Q9BX26 1530 aa9.83□□□□□ -0.84
NECTIN3-208ENST00000486596 EVI5O60447 810 aa9.83□□□□□ -0.84
NECTIN3-208ENST00000486596 ZNF454Q8N9F8 522 aa9.83□□□□□ -0.84
NECTIN3-208ENST00000486596 CNTLNQ9NXG0 1405 aa9.82□□□□□ -0.84
NECTIN3-208ENST00000486596 EMILIN3Q9NT22 766 aa9.82□□□□□ -0.84
NECTIN3-208ENST00000486596 CAMSAP1Q5T5Y3 1602 aa9.82□□□□□ -0.84
NECTIN3-208ENST00000486596 MROH2AA6NES4 1674 aa9.81□□□□□ -0.84
NECTIN3-208ENST00000486596 KCNK17Q96T54 332 aa9.81□□□□□ -0.84
NECTIN3-208ENST00000486596 SLC4A5Q9BY07 1137 aa9.81□□□□□ -0.84
NECTIN3-208ENST00000486596 ESF1Q9H501 851 aaKnown RBP9.81□□□□□ -0.84
NECTIN3-208ENST00000486596 GPATCH8Q9UKJ3 1502 aaKnown RBP9.81□□□□□ -0.84
NECTIN3-208ENST00000486596 NPATQ14207 1427 aa9.81□□□□□ -0.84
NECTIN3-208ENST00000486596 PLXNC1O60486 1568 aa9.8□□□□□ -0.84
NECTIN3-208ENST00000486596 FYCO1Q9BQS8 1478 aa9.8□□□□□ -0.84
NECTIN3-208ENST00000486596 SOCS7O14512 581 aa9.8□□□□□ -0.84
NECTIN3-208ENST00000486596 ZNF777Q9ULD5 760 aaPredicted RBP9.8□□□□□ -0.84
NECTIN3-208ENST00000486596 SETD1BQ9UPS6 1966 aaKnown RBP9.8□□□□□ -0.84
NECTIN3-208ENST00000486596 INO80Q9ULG1 1556 aaPredicted RBP9.8□□□□□ -0.84
NECTIN3-208ENST00000486596 IQSEC2Q5JU85 1478 aa9.79□□□□□ -0.84
NECTIN3-208ENST00000486596 ZMYM3Q14202 1370 aa9.79□□□□□ -0.84
NECTIN3-208ENST00000486596 MYO3AQ8NEV4 1616 aa9.79□□□□□ -0.84
NECTIN3-208ENST00000486596 ATP7AQ04656 1500 aa9.79□□□□□ -0.84
NECTIN3-208ENST00000486596 MAP3K9P80192 1104 aa9.79□□□□□ -0.84
NECTIN3-208ENST00000486596 VPS9D1Q9Y2B5 631 aa9.79□□□□□ -0.84
NECTIN3-208ENST00000486596 CLTCQ00610 1675 aaKnown RBP9.79□□□□□ -0.84
NECTIN3-208ENST00000486596 SUPT6HQ7KZ85 1726 aaKnown RBP9.79□□□□□ -0.84
NECTIN3-208ENST00000486596 ZNF142P52746 1687 aaPredicted RBP9.78□□□□□ -0.84
NECTIN3-208ENST00000486596 HNRNPMP52272 730 aaKnown RBP eCLIP9.78□□□□□ -0.84
NECTIN3-208ENST00000486596 CAMK2BQ13554 666 aa9.78□□□□□ -0.84
NECTIN3-208ENST00000486596 HCSTQ9UBK5 93 aa9.78□□□□□ -0.84
NECTIN3-208ENST00000486596 SPAG9O60271 1321 aaKnown RBP9.78□□□□□ -0.84
NECTIN3-208ENST00000486596 ZNF335Q9H4Z2 1342 aaPredicted RBP9.78□□□□□ -0.84
NECTIN3-208ENST00000486596 CEP170BQ9Y4F5 1589 aaPredicted RBP9.77□□□□□ -0.85
NECTIN3-208ENST00000486596 ZDHHC16Q969W1 377 aa9.77□□□□□ -0.85
NECTIN3-208ENST00000486596 A2MP01023 1474 aa9.77□□□□□ -0.85
NECTIN3-208ENST00000486596 PTPRKQ15262 1439 aa9.76□□□□□ -0.85
NECTIN3-208ENST00000486596 PTPREP23469 700 aa9.76□□□□□ -0.85
NECTIN3-208ENST00000486596 PLA2R1Q13018 1463 aa9.76□□□□□ -0.85
NECTIN3-208ENST00000486596 TCOF1Q13428 1488 aaKnown RBP9.76□□□□□ -0.85
NECTIN3-208ENST00000486596 KIAA1107Q9UPP5 1409 aa9.75□□□□□ -0.85
NECTIN3-208ENST00000486596 BHMG1C9JSJ3 638 aaPredicted RBP9.74□□□□□ -0.85
NECTIN3-208ENST00000486596 ZBED2Q9BTP6 218 aa9.74□□□□□ -0.85
NECTIN3-208ENST00000486596 ADAM33Q9BZ11 813 aa9.74□□□□□ -0.85
NECTIN3-208ENST00000486596 WDR70Q9NW82 654 aa9.74□□□□□ -0.85
NECTIN3-208ENST00000486596 PLEKHH2Q8IVE3 1493 aa9.73□□□□□ -0.85
NECTIN3-208ENST00000486596 GGT6Q6P531 493 aa9.73□□□□□ -0.85
NECTIN3-208ENST00000486596 CFDP1Q9UEE9 299 aaPredicted RBP9.73□□□□□ -0.85
NECTIN3-208ENST00000486596 CCNB3Q8WWL7 1395 aa9.73□□□□□ -0.85
NECTIN3-208ENST00000486596 TIAM1Q13009 1591 aa9.72□□□□□ -0.85
NECTIN3-208ENST00000486596 ADGBQ8N7X0 1667 aa9.72□□□□□ -0.85
NECTIN3-208ENST00000486596 PCDHGA10Q9Y5H3 936 aa9.72□□□□□ -0.85
NECTIN3-208ENST00000486596 ZNF644Q9H582 1327 aaPredicted RBP9.72□□□□□ -0.85
NECTIN3-208ENST00000486596 MBD5Q9P267 1494 aa9.72□□□□□ -0.85
NECTIN3-208ENST00000486596 UBAP1LF5GYI3 381 aa9.71□□□□□ -0.86
NECTIN3-208ENST00000486596 STAC3Q96MF2 364 aa9.71□□□□□ -0.86
NECTIN3-208ENST00000486596 DNMT1P26358 1616 aaKnown RBP9.71□□□□□ -0.86
NECTIN3-208ENST00000486596 TSHZ2Q9NRE2 1034 aa9.7□□□□□ -0.86
NECTIN3-208ENST00000486596 MTUS2Q5JR59 1369 aa9.7□□□□□ -0.86
NECTIN3-208ENST00000486596 A2ML1A8K2U0 1454 aa9.7□□□□□ -0.86
NECTIN3-208ENST00000486596 NEURL4Q96JN8 1562 aa9.7□□□□□ -0.86
NECTIN3-208ENST00000486596 PHF14O94880 888 aa9.69□□□□□ -0.86
NECTIN3-208ENST00000486596 EHBP1L1Q8N3D4 1523 aa9.69□□□□□ -0.86
NECTIN3-208ENST00000486596 FBXW7Q969H0 707 aa9.69□□□□□ -0.86
NECTIN3-208ENST00000486596 KCTD12Q96CX2 325 aaKnown RBP9.69□□□□□ -0.86
NECTIN3-208ENST00000486596 RTEL1-TNFRSF6BF6WH68 1400 aa9.67□□□□□ -0.86
NECTIN3-208ENST00000486596 DPYSL4O14531 572 aa9.67□□□□□ -0.86
NECTIN3-208ENST00000486596 FBXO31Q5XUX0 539 aaPredicted RBP9.67□□□□□ -0.86
NECTIN3-208ENST00000486596 POLR1AO95602 1720 aaPredicted RBP9.67□□□□□ -0.86
NECTIN3-208ENST00000486596 KDM5DQ9BY66 1539 aa9.66□□□□□ -0.86
NECTIN3-208ENST00000486596 DHX29Q7Z478 1369 aaKnown RBP9.66□□□□□ -0.86
NECTIN3-208ENST00000486596 PPP1R3GB7ZBB8 358 aa9.66□□□□□ -0.86
NECTIN3-208ENST00000486596 TYW1BQ6NUM6 668 aa9.66□□□□□ -0.86
NECTIN3-208ENST00000486596 PLA2G2EQ9NZK7 142 aa9.66□□□□□ -0.86
NECTIN3-208ENST00000486596 PZPP20742 1482 aa9.66□□□□□ -0.86
NECTIN3-208ENST00000486596 CCDC141Q6ZP82 1450 aa9.66□□□□□ -0.86
NECTIN3-208ENST00000486596 CEP162Q5TB80 1403 aa9.65□□□□□ -0.86
NECTIN3-208ENST00000486596 TNRQ92752 1358 aa9.65□□□□□ -0.86
NECTIN3-208ENST00000486596 MED1Q15648 1581 aaPredicted RBP9.65□□□□□ -0.86
NECTIN3-208ENST00000486596 VWDEQ8N2E2 1590 aa9.65□□□□□ -0.86
NECTIN3-208ENST00000486596 CPS1P31327 1500 aa9.65□□□□□ -0.86
NECTIN3-208ENST00000486596 CAMSAP2Q08AD1 1489 aa9.65□□□□□ -0.87
NECTIN3-208ENST00000486596 SHANK2Q9UPX8 1470 aa9.65□□□□□ -0.87
NECTIN3-208ENST00000486596 ALKQ9UM73 1620 aa9.64□□□□□ -0.87
NECTIN3-208ENST00000486596 KIF3BO15066 747 aa9.64□□□□□ -0.87
NECTIN3-208ENST00000486596 HSPA1LP34931 641 aa9.64□□□□□ -0.87
NECTIN3-208ENST00000486596 PIP4K2BP78356 416 aa9.64□□□□□ -0.87
NECTIN3-208ENST00000486596 EPAS1Q99814 870 aa9.64□□□□□ -0.87
NECTIN3-208ENST00000486596 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.63□□□□□ -0.87
NECTIN3-208ENST00000486596 FAM135AQ9P2D6 1515 aa9.63□□□□□ -0.87
NECTIN3-208ENST00000486596 PLCB2Q00722 1185 aa9.63□□□□□ -0.87
NECTIN3-208ENST00000486596 E2F4Q16254 413 aa9.63□□□□□ -0.87
NECTIN3-208ENST00000486596 NCOA2Q15596 1464 aa9.63□□□□□ -0.87
NECTIN3-208ENST00000486596 COL9A1P20849 921 aa9.62□□□□□ -0.87
NECTIN3-208ENST00000486596 MRPL50Q8N5N7 158 aaKnown RBP9.62□□□□□ -0.87
NECTIN3-208ENST00000486596 NBPF3Q9H094 633 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms