RNA–Protein interactions for RNA: ENST00000486554.1

TSC22D3-208, Transcript of TSC22 domain family member 3, humanhuman

TSL 2

Gene TSC22D3, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-208ENST00000486554 SLIT2O94813 1529 aa21.51■■□□□ 1.03
TSC22D3-208ENST00000486554 NRXN3Q9Y4C0 1643 aa21.5■■□□□ 1.03
TSC22D3-208ENST00000486554 METP08581 1390 aa21.48■■□□□ 1.03
TSC22D3-208ENST00000486554 ZNF784Q8NCA9 323 aaPredicted RBP21.48■■□□□ 1.03
TSC22D3-208ENST00000486554 A0A0G2JS52 829 aa21.47■■□□□ 1.03
TSC22D3-208ENST00000486554 MYT1Q01538 1121 aa21.47■■□□□ 1.03
TSC22D3-208ENST00000486554 CCDC9Q9Y3X0 531 aaKnown RBP21.47■■□□□ 1.03
TSC22D3-208ENST00000486554 RGPD1P0DJD0 1748 aa21.46■■□□□ 1.03
TSC22D3-208ENST00000486554 PPP1R1BQ9UD71 204 aaPredicted RBP21.45■■□□□ 1.02
TSC22D3-208ENST00000486554 C1QTNF8P60827 252 aa21.44■■□□□ 1.02
TSC22D3-208ENST00000486554 NPHP3Q7Z494 1330 aa21.44■■□□□ 1.02
TSC22D3-208ENST00000486554 ANKRD30AQ9BXX3 1397 aa21.44■■□□□ 1.02
TSC22D3-208ENST00000486554 XPCQ01831 940 aaPredicted RBP21.43■■□□□ 1.02
TSC22D3-208ENST00000486554 VPS72Q15906 364 aa21.43■■□□□ 1.02
TSC22D3-208ENST00000486554 CHIC2Q9UKJ5 165 aa21.43■■□□□ 1.02
TSC22D3-208ENST00000486554 DAPK1P53355 1430 aa21.43■■□□□ 1.02
TSC22D3-208ENST00000486554 PTPN23Q9H3S7 1636 aa21.43■■□□□ 1.02
TSC22D3-208ENST00000486554 PXDNQ92626 1479 aa21.42■■□□□ 1.02
TSC22D3-208ENST00000486554 ONECUT3O60422 494 aaPredicted RBP21.41■■□□□ 1.02
TSC22D3-208ENST00000486554 EZH2Q15910 746 aaKnown RBP21.41■■□□□ 1.02
TSC22D3-208ENST00000486554 DISP2A7MBM2 1401 aa21.38■■□□□ 1.01
TSC22D3-208ENST00000486554 NINLQ9Y2I6 1382 aa21.38■■□□□ 1.01
TSC22D3-208ENST00000486554 CAMTA1Q9Y6Y1 1673 aa21.38■■□□□ 1.01
TSC22D3-208ENST00000486554 USP32Q8NFA0 1604 aa21.38■■□□□ 1.01
TSC22D3-208ENST00000486554 ESCO1Q5FWF5 840 aa21.37■■□□□ 1.01
TSC22D3-208ENST00000486554 ADGRL2O95490 1459 aa21.36■■□□□ 1.01
TSC22D3-208ENST00000486554 TNS1Q9HBL0 1735 aaKnown RBP21.35■■□□□ 1.01
TSC22D3-208ENST00000486554 LOC105371045A0A1W2PR82 267 aa21.35■■□□□ 1.01
TSC22D3-208ENST00000486554 FOXO3O43524 673 aa21.35■■□□□ 1.01
TSC22D3-208ENST00000486554 FAM182BQ5T319 152 aa21.35■■□□□ 1.01
TSC22D3-208ENST00000486554 PLCH1Q4KWH8 1693 aa21.34■■□□□ 1.01
TSC22D3-208ENST00000486554 HAP1P54257 671 aaPredicted RBP21.33■■□□□ 1.01
TSC22D3-208ENST00000486554 FAM98CQ17RN3 349 aaKnown RBP21.32■■□□□ 1
TSC22D3-208ENST00000486554 SPON1Q9HCB6 807 aa21.32■■□□□ 1
TSC22D3-208ENST00000486554 IQGAP3Q86VI3 1631 aa21.32■■□□□ 1
TSC22D3-208ENST00000486554 ADGRB2O60241 1585 aa21.31■■□□□ 1
TSC22D3-208ENST00000486554 E9PCH4 1651 aa21.31■■□□□ 1
TSC22D3-208ENST00000486554 NWD2Q9ULI1 1742 aa21.31■■□□□ 1
TSC22D3-208ENST00000486554 KANK4Q5T7N3 995 aaPredicted RBP21.3■■□□□ 1
TSC22D3-208ENST00000486554 CAMKK2Q96RR4 588 aa21.3■■□□□ 1
TSC22D3-208ENST00000486554 ROBO2Q9HCK4 1378 aa21.3■■□□□ 1
TSC22D3-208ENST00000486554 LRPPRCP42704 1394 aaKnown RBP21.29■■□□□ 1
TSC22D3-208ENST00000486554 ZNF326Q5BKZ1 582 aaKnown RBP21.28■■□□□ 1
TSC22D3-208ENST00000486554 KCNQ2O43526 872 aa21.27■■□□□ 1
TSC22D3-208ENST00000486554 PLEKHG5O94827 1062 aa21.26■□□□□ 0.99
TSC22D3-208ENST00000486554 ANKRD50Q9ULJ7 1429 aa21.26■□□□□ 0.99
TSC22D3-208ENST00000486554 SPATA31A3Q5VYP0 1347 aa21.26■□□□□ 0.99
TSC22D3-208ENST00000486554 PARD3Q8TEW0 1356 aa21.23■□□□□ 0.99
TSC22D3-208ENST00000486554 TRIM37O94972 964 aa21.23■□□□□ 0.99
TSC22D3-208ENST00000486554 NBPF8Q3BBV2 869 aa21.23■□□□□ 0.99
TSC22D3-208ENST00000486554 NBPF14Q5TI25 921 aa21.23■□□□□ 0.99
TSC22D3-208ENST00000486554 CABLES1Q8TDN4 633 aa21.22■□□□□ 0.99
TSC22D3-208ENST00000486554 RREB1Q92766 1687 aa21.21■□□□□ 0.99
TSC22D3-208ENST00000486554 NUP188Q5SRE5 1749 aa21.21■□□□□ 0.99
TSC22D3-208ENST00000486554 APBA3O96018 575 aa21.21■□□□□ 0.99
TSC22D3-208ENST00000486554 CDC42BPGQ6DT37 1551 aa21.21■□□□□ 0.99
TSC22D3-208ENST00000486554 HFM1A2PYH4 1435 aa21.2■□□□□ 0.98
TSC22D3-208ENST00000486554 NUTM2FA1L443 756 aa21.19■□□□□ 0.98
TSC22D3-208ENST00000486554 CCDC144AA2RUR9 1427 aa21.17■□□□□ 0.98
TSC22D3-208ENST00000486554 NRAPQ86VF7 1730 aa21.17■□□□□ 0.98
TSC22D3-208ENST00000486554 GIGYF1O75420 1035 aaPredicted RBP21.16■□□□□ 0.98
TSC22D3-208ENST00000486554 FAM83GA6ND36 823 aa21.15■□□□□ 0.98
TSC22D3-208ENST00000486554 ABCA3Q99758 1704 aa21.15■□□□□ 0.98
TSC22D3-208ENST00000486554 UTRNP46939 3433 aa21.14■□□□□ 0.98
TSC22D3-208ENST00000486554 NEXMIFQ5QGS0 1516 aa21.14■□□□□ 0.98
TSC22D3-208ENST00000486554 CHD4Q14839 1912 aa21.14■□□□□ 0.98
TSC22D3-208ENST00000486554 KRT28Q7Z3Y7 464 aa21.14■□□□□ 0.97
TSC22D3-208ENST00000486554 NRKQ7Z2Y5 1582 aa21.14■□□□□ 0.97
TSC22D3-208ENST00000486554 TNS3Q68CZ2 1445 aa21.13■□□□□ 0.97
TSC22D3-208ENST00000486554 PRAG1Q86YV5 1406 aa21.13■□□□□ 0.97
TSC22D3-208ENST00000486554 THSD7AQ9UPZ6 1657 aa21.13■□□□□ 0.97
TSC22D3-208ENST00000486554 CEP350Q5VT06 3117 aa21.13■□□□□ 0.97
TSC22D3-208ENST00000486554 FAM196AQ6ZSG2 479 aa21.13■□□□□ 0.97
TSC22D3-208ENST00000486554 BTG4Q9NY30 223 aa21.12■□□□□ 0.97
TSC22D3-208ENST00000486554 LMOD2Q6P5Q4 547 aa21.11■□□□□ 0.97
TSC22D3-208ENST00000486554 KIF1AQ12756 1690 aa21.1■□□□□ 0.97
TSC22D3-208ENST00000486554 NAIPQ13075 1403 aa21.1■□□□□ 0.97
TSC22D3-208ENST00000486554 VPS8Q8N3P4 1428 aa21.1■□□□□ 0.97
TSC22D3-208ENST00000486554 SPATA31A5Q5VU36 1347 aa21.08■□□□□ 0.97
TSC22D3-208ENST00000486554 SPATA31A7Q8IWB4 1347 aa21.08■□□□□ 0.97
TSC22D3-208ENST00000486554 MYOM1P52179 1685 aa21.07■□□□□ 0.96
TSC22D3-208ENST00000486554 PSME1Q06323 249 aa21.05■□□□□ 0.96
TSC22D3-208ENST00000486554 ARHGEF10O15013 1369 aa21.03■□□□□ 0.96
TSC22D3-208ENST00000486554 COL14A1Q05707 1796 aaKnown RBP21.02■□□□□ 0.96
TSC22D3-208ENST00000486554 NUP155O75694 1391 aa21.01■□□□□ 0.95
TSC22D3-208ENST00000486554 CASZ1Q86V15 1759 aa21■□□□□ 0.95
TSC22D3-208ENST00000486554 ZBTB7AO95365 584 aa21■□□□□ 0.95
TSC22D3-208ENST00000486554 SYT17Q9BSW7 474 aa21■□□□□ 0.95
TSC22D3-208ENST00000486554 FHDC1Q9C0D6 1143 aaPredicted RBP21■□□□□ 0.95
TSC22D3-208ENST00000486554 FMN2Q9NZ56 1722 aa21■□□□□ 0.95
TSC22D3-208ENST00000486554 SBNO1A3KN83 1393 aa20.99■□□□□ 0.95
TSC22D3-208ENST00000486554 RRBP1Q9P2E9 1410 aaKnown RBP20.98■□□□□ 0.95
TSC22D3-208ENST00000486554 CLTCL1P53675 1640 aa20.98■□□□□ 0.95
TSC22D3-208ENST00000486554 VGFO15240 615 aaPredicted RBP20.98■□□□□ 0.95
TSC22D3-208ENST00000486554 PTGER2P43116 358 aa20.97■□□□□ 0.95
TSC22D3-208ENST00000486554 FAM50AQ14320 339 aaKnown RBP20.97■□□□□ 0.95
TSC22D3-208ENST00000486554 WAPLQ7Z5K2 1190 aa20.96■□□□□ 0.95
TSC22D3-208ENST00000486554 PDGFDQ9GZP0 370 aaPredicted RBP20.96■□□□□ 0.95
TSC22D3-208ENST00000486554 PHF8Q9UPP1 1060 aa20.96■□□□□ 0.95
TSC22D3-208ENST00000486554 ATF5Q9Y2D1 282 aaPredicted RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms