RNA–Protein interactions for RNA: ENST00000486425.1

MUC4-222, Transcript of mucin 4, cell surface associated, human

TSL 4

Gene MUC4, Length 553 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC4-222	ENST00000486425	GPR153	Q6NV75	609 aa		10.84	□□□□□ -0.67
MUC4-222	ENST00000486425	CEP152	O94986	1710 aa		10.84	□□□□□ -0.67
MUC4-222	ENST00000486425		E9PCH4	1651 aa		10.83	□□□□□ -0.68
MUC4-222	ENST00000486425	RPRD2	Q5VT52	1461 aa	Known RBP	10.83	□□□□□ -0.68
MUC4-222	ENST00000486425	MLH3	Q9UHC1	1453 aa		10.83	□□□□□ -0.68
MUC4-222	ENST00000486425	HNRNPM	P52272	730 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
MUC4-222	ENST00000486425	FOXK1	P85037	733 aa		10.83	□□□□□ -0.68
MUC4-222	ENST00000486425	FBXO41	Q8TF61	875 aa		10.83	□□□□□ -0.68
MUC4-222	ENST00000486425	ZC3H13	Q5T200	1668 aa	Known RBP	10.82	□□□□□ -0.68
MUC4-222	ENST00000486425	SLC34A2	O95436	690 aa		10.82	□□□□□ -0.68
MUC4-222	ENST00000486425	CDAN1	Q8IWY9	1227 aa		10.82	□□□□□ -0.68
MUC4-222	ENST00000486425	RERE	Q9P2R6	1566 aa		10.82	□□□□□ -0.68
MUC4-222	ENST00000486425	DIP2C	Q9Y2E4	1556 aa		10.81	□□□□□ -0.68
MUC4-222	ENST00000486425	ANKRD30B	Q9BXX2	1392 aa		10.8	□□□□□ -0.68
MUC4-222	ENST00000486425	CRISPLD2	Q9H0B8	497 aa		10.8	□□□□□ -0.68
MUC4-222	ENST00000486425	SCAPER	Q9BY12	1400 aa		10.8	□□□□□ -0.68
MUC4-222	ENST00000486425	ATP10A	O60312	1499 aa		10.8	□□□□□ -0.68
MUC4-222	ENST00000486425	NEURL4	Q96JN8	1562 aa		10.79	□□□□□ -0.68
MUC4-222	ENST00000486425	DSG2	Q14126	1118 aa		10.79	□□□□□ -0.68
MUC4-222	ENST00000486425	LMTK2	Q8IWU2	1503 aa		10.79	□□□□□ -0.68
MUC4-222	ENST00000486425	POTEB3	A0JP26	581 aa		10.78	□□□□□ -0.68
MUC4-222	ENST00000486425	FAM205C	A6NFA0	338 aa		10.78	□□□□□ -0.68
MUC4-222	ENST00000486425	ARSI	Q5FYB1	569 aa		10.78	□□□□□ -0.68
MUC4-222	ENST00000486425	POTEB	Q6S5H4	581 aa		10.78	□□□□□ -0.68
MUC4-222	ENST00000486425	PLPP6	Q8IY26	295 aa		10.78	□□□□□ -0.68
MUC4-222	ENST00000486425	MPHOSPH9	Q99550	1183 aa		10.78	□□□□□ -0.68
MUC4-222	ENST00000486425	HS3ST6	Q96QI5	342 aa		10.77	□□□□□ -0.69
MUC4-222	ENST00000486425	NCKAP5L	Q9HCH0	1330 aa		10.77	□□□□□ -0.69
MUC4-222	ENST00000486425	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.76	□□□□□ -0.69
MUC4-222	ENST00000486425	SPAG9	O60271	1321 aa	Known RBP	10.76	□□□□□ -0.69
MUC4-222	ENST00000486425	IFT172	Q9UG01	1749 aa		10.75	□□□□□ -0.69
MUC4-222	ENST00000486425	KIF1B	O60333	1816 aa		10.75	□□□□□ -0.69
MUC4-222	ENST00000486425	TRPM2	O94759	1503 aa		10.75	□□□□□ -0.69
MUC4-222	ENST00000486425	EFCAB6	Q5THR3	1501 aa		10.75	□□□□□ -0.69
MUC4-222	ENST00000486425	PDE4A	P27815	886 aa		10.75	□□□□□ -0.69
MUC4-222	ENST00000486425	CAMSAP1	Q5T5Y3	1602 aa		10.74	□□□□□ -0.69
MUC4-222	ENST00000486425	RAPGEF3	O95398	923 aa		10.74	□□□□□ -0.69
MUC4-222	ENST00000486425	SPRYD3	Q8NCJ5	442 aa		10.74	□□□□□ -0.69
MUC4-222	ENST00000486425	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.74	□□□□□ -0.69
MUC4-222	ENST00000486425	PCDHGA4	Q9Y5G9	962 aa		10.74	□□□□□ -0.69
MUC4-222	ENST00000486425	ERBB3	P21860	1342 aa		10.74	□□□□□ -0.69
MUC4-222	ENST00000486425	A2M	P01023	1474 aa		10.74	□□□□□ -0.69
MUC4-222	ENST00000486425	PTCD2	Q8WV60	388 aa	Known RBP	10.73	□□□□□ -0.69
MUC4-222	ENST00000486425	TRIM52	Q96A61	297 aa		10.73	□□□□□ -0.69
MUC4-222	ENST00000486425	NUP155	O75694	1391 aa		10.73	□□□□□ -0.69
MUC4-222	ENST00000486425	DHX29	Q7Z478	1369 aa	Known RBP	10.73	□□□□□ -0.69
MUC4-222	ENST00000486425	LAMC1	P11047	1609 aa		10.73	□□□□□ -0.69
MUC4-222	ENST00000486425	TONSL	Q96HA7	1378 aa		10.72	□□□□□ -0.69
MUC4-222	ENST00000486425	ARHGEF40	Q8TER5	1519 aa		10.72	□□□□□ -0.69
MUC4-222	ENST00000486425	TRPM1	Q7Z4N2	1603 aa		10.71	□□□□□ -0.69
MUC4-222	ENST00000486425	CADPS2	Q86UW7	1296 aa		10.71	□□□□□ -0.69
MUC4-222	ENST00000486425	SIN3A	Q96ST3	1273 aa		10.71	□□□□□ -0.69
MUC4-222	ENST00000486425	ADAMTSL3	P82987	1691 aa		10.7	□□□□□ -0.7
MUC4-222	ENST00000486425	CLTCL1	P53675	1640 aa		10.7	□□□□□ -0.7
MUC4-222	ENST00000486425	PPP1R15B	Q5SWA1	713 aa		10.7	□□□□□ -0.7
MUC4-222	ENST00000486425	AFAP1	Q8N556	730 aa		10.7	□□□□□ -0.7
MUC4-222	ENST00000486425	SIGLEC1	Q9BZZ2	1709 aa		10.7	□□□□□ -0.7
MUC4-222	ENST00000486425	KIAA1210	Q9ULL0	1709 aa		10.7	□□□□□ -0.7
MUC4-222	ENST00000486425	PIK3C2B	O00750	1634 aa		10.69	□□□□□ -0.7
MUC4-222	ENST00000486425	AGL	P35573	1532 aa		10.69	□□□□□ -0.7
MUC4-222	ENST00000486425	PPP1R15A	O75807	674 aa	Predicted RBP	10.69	□□□□□ -0.7
MUC4-222	ENST00000486425	MFSD10	Q14728	455 aa		10.69	□□□□□ -0.7
MUC4-222	ENST00000486425	VARS2	Q5ST30	1063 aa	Known RBP	10.69	□□□□□ -0.7
MUC4-222	ENST00000486425	LARP6	Q9BRS8	491 aa	Known RBP	10.69	□□□□□ -0.7
MUC4-222	ENST00000486425	PTPRM	P28827	1452 aa		10.68	□□□□□ -0.7
MUC4-222	ENST00000486425	PLA2R1	Q13018	1463 aa		10.68	□□□□□ -0.7
MUC4-222	ENST00000486425	PTPRT	O14522	1441 aa		10.68	□□□□□ -0.7
MUC4-222	ENST00000486425	UHRF1BP1	Q6BDS2	1440 aa		10.68	□□□□□ -0.7
MUC4-222	ENST00000486425	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.68	□□□□□ -0.7
MUC4-222	ENST00000486425	NUDT7	P0C024	238 aa		10.68	□□□□□ -0.7
MUC4-222	ENST00000486425	MROH2A	A6NES4	1674 aa		10.67	□□□□□ -0.7
MUC4-222	ENST00000486425	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.67	□□□□□ -0.7
MUC4-222	ENST00000486425	DDX27	Q96GQ7	796 aa	Known RBP	10.67	□□□□□ -0.7
MUC4-222	ENST00000486425	ABCC3	O15438	1527 aa		10.67	□□□□□ -0.7
MUC4-222	ENST00000486425	PREX1	Q8TCU6	1659 aa		10.66	□□□□□ -0.7
MUC4-222	ENST00000486425	CFAP65	Q6ZU64	1925 aa	Known RBP	10.66	□□□□□ -0.7
MUC4-222	ENST00000486425	PPL	O60437	1756 aa		10.66	□□□□□ -0.7
MUC4-222	ENST00000486425	TBC1D12	O60347	775 aa		10.65	□□□□□ -0.7
MUC4-222	ENST00000486425	ILDR2	Q71H61	639 aa		10.65	□□□□□ -0.7
MUC4-222	ENST00000486425	OXER1	Q8TDS5	423 aa		10.65	□□□□□ -0.7
MUC4-222	ENST00000486425	PLSCR2	Q9NRY7	297 aa		10.65	□□□□□ -0.7
MUC4-222	ENST00000486425	RALGAPB	Q86X10	1494 aa		10.64	□□□□□ -0.71
MUC4-222	ENST00000486425	NEUROD1	Q13562	356 aa		10.64	□□□□□ -0.71
MUC4-222	ENST00000486425	ZNF687	Q8N1G0	1237 aa		10.64	□□□□□ -0.71
MUC4-222	ENST00000486425	CFAP44	Q96MT7	982 aa		10.64	□□□□□ -0.71
MUC4-222	ENST00000486425	KRTAP3-3	Q9BYR6	98 aa		10.64	□□□□□ -0.71
MUC4-222	ENST00000486425	KRTAP3-2	Q9BYR7	98 aa		10.64	□□□□□ -0.71
MUC4-222	ENST00000486425	MADD	Q8WXG6	1647 aa		10.64	□□□□□ -0.71
MUC4-222	ENST00000486425	CCDC144A	A2RUR9	1427 aa		10.64	□□□□□ -0.71
MUC4-222	ENST00000486425	KANK1	Q14678	1352 aa		10.64	□□□□□ -0.71
MUC4-222	ENST00000486425	MYO5B	Q9ULV0	1848 aa		10.63	□□□□□ -0.71
MUC4-222	ENST00000486425	LMTK3	Q96Q04	1460 aa		10.63	□□□□□ -0.71
MUC4-222	ENST00000486425	ADGRB3	O60242	1522 aa		10.63	□□□□□ -0.71
MUC4-222	ENST00000486425	ARHGAP31	Q2M1Z3	1444 aa		10.62	□□□□□ -0.71
MUC4-222	ENST00000486425	SPATA31E1	Q6ZUB1	1445 aa		10.62	□□□□□ -0.71
MUC4-222	ENST00000486425	YEATS2	Q9ULM3	1422 aa		10.62	□□□□□ -0.71
MUC4-222	ENST00000486425	LHX6	Q9UPM6	363 aa		10.62	□□□□□ -0.71
MUC4-222	ENST00000486425	IQGAP1	P46940	1657 aa		10.62	□□□□□ -0.71
MUC4-222	ENST00000486425	CLTC	Q00610	1675 aa	Known RBP	10.61	□□□□□ -0.71
MUC4-222	ENST00000486425	SYNM	O15061	1565 aa		10.6	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms