RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 NRXN1Q9ULB1 1477 aa20.28■□□□□ 0.84
POLR2J3-204ENST00000486319 SETD1AO15047 1707 aaKnown RBP20.28■□□□□ 0.84
POLR2J3-204ENST00000486319 C11orf95C9JLR9 678 aaPredicted RBP20.27■□□□□ 0.83
POLR2J3-204ENST00000486319 NBPF1Q3BBV0 1214 aa20.26■□□□□ 0.83
POLR2J3-204ENST00000486319 KIF7Q2M1P5 1343 aa20.26■□□□□ 0.83
POLR2J3-204ENST00000486319 LRPPRCP42704 1394 aaKnown RBP20.25■□□□□ 0.83
POLR2J3-204ENST00000486319 ABCC11Q96J66 1382 aa20.24■□□□□ 0.83
POLR2J3-204ENST00000486319 DCCP43146 1447 aa20.24■□□□□ 0.83
POLR2J3-204ENST00000486319 ADGRL3Q9HAR2 1447 aa20.24■□□□□ 0.83
POLR2J3-204ENST00000486319 ST20-MTHFSA0A0A6YYL1 179 aa20.23■□□□□ 0.83
POLR2J3-204ENST00000486319 ANP32CO43423 234 aa20.23■□□□□ 0.83
POLR2J3-204ENST00000486319 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.23■□□□□ 0.83
POLR2J3-204ENST00000486319 YTHDC2Q9H6S0 1430 aaKnown RBP20.22■□□□□ 0.83
POLR2J3-204ENST00000486319 WAPLQ7Z5K2 1190 aa20.22■□□□□ 0.83
POLR2J3-204ENST00000486319 TECPR2O15040 1411 aa20.2■□□□□ 0.82
POLR2J3-204ENST00000486319 ASXL1Q8IXJ9 1541 aa20.19■□□□□ 0.82
POLR2J3-204ENST00000486319 SIRT1Q96EB6 747 aa20.19■□□□□ 0.82
POLR2J3-204ENST00000486319 ROBO1Q9Y6N7 1651 aa20.19■□□□□ 0.82
POLR2J3-204ENST00000486319 BRINP3Q76B58 766 aa20.17■□□□□ 0.82
POLR2J3-204ENST00000486319 MST1RQ04912 1400 aa20.16■□□□□ 0.82
POLR2J3-204ENST00000486319 PLEKHH1Q9ULM0 1364 aa20.16■□□□□ 0.82
POLR2J3-204ENST00000486319 TRAK1Q9UPV9 953 aa20.15■□□□□ 0.82
POLR2J3-204ENST00000486319 CCER2I3L3R5 266 aa20.14■□□□□ 0.81
POLR2J3-204ENST00000486319 PRAM1Q96QH2 718 aa20.14■□□□□ 0.81
POLR2J3-204ENST00000486319 EIF3AQ14152 1382 aaKnown RBP20.13■□□□□ 0.81
POLR2J3-204ENST00000486319 DISP3Q9P2K9 1392 aa20.13■□□□□ 0.81
POLR2J3-204ENST00000486319 NALCNQ8IZF0 1738 aa20.13■□□□□ 0.81
POLR2J3-204ENST00000486319 POGKQ9P215 609 aa20.13■□□□□ 0.81
POLR2J3-204ENST00000486319 CENPBP07199 599 aaPredicted RBP20.12■□□□□ 0.81
POLR2J3-204ENST00000486319 SAFB2Q14151 953 aaKnown RBP eCLIP20.12■□□□□ 0.81
POLR2J3-204ENST00000486319 ADGRB1O14514 1584 aa20.11■□□□□ 0.81
POLR2J3-204ENST00000486319 C1orf167Q5SNV9 1468 aa20.11■□□□□ 0.81
POLR2J3-204ENST00000486319 TESK2Q96S53 571 aa20.1■□□□□ 0.81
POLR2J3-204ENST00000486319 KNDC1Q76NI1 1749 aa20.1■□□□□ 0.81
POLR2J3-204ENST00000486319 ORAI2Q96SN7 254 aa20.09■□□□□ 0.81
POLR2J3-204ENST00000486319 POLR3GLQ9BT43 218 aa20.09■□□□□ 0.81
POLR2J3-204ENST00000486319 TMF1P82094 1093 aa20.08■□□□□ 0.81
POLR2J3-204ENST00000486319 NUTM2FA1L443 756 aa20.07■□□□□ 0.8
POLR2J3-204ENST00000486319 SLC24A1O60721 1099 aa20.07■□□□□ 0.8
POLR2J3-204ENST00000486319 YTHDC1Q96MU7 727 aaKnown RBP20.07■□□□□ 0.8
POLR2J3-204ENST00000486319 ESCO1Q5FWF5 840 aa20.07■□□□□ 0.8
POLR2J3-204ENST00000486319 DLC1Q96QB1 1528 aa20.06■□□□□ 0.8
POLR2J3-204ENST00000486319 DDX17Q92841 729 aaKnown RBP20.06■□□□□ 0.8
POLR2J3-204ENST00000486319 PHLPP1O60346 1717 aa20.05■□□□□ 0.8
POLR2J3-204ENST00000486319 JCADQ9P266 1359 aa20.05■□□□□ 0.8
POLR2J3-204ENST00000486319 CDC42BPGQ6DT37 1551 aa20.05■□□□□ 0.8
POLR2J3-204ENST00000486319 AHDC1Q5TGY3 1603 aaPredicted RBP20.04■□□□□ 0.8
POLR2J3-204ENST00000486319 MINK1Q8N4C8 1332 aaPredicted RBP20.02■□□□□ 0.8
POLR2J3-204ENST00000486319 CDCA8Q53HL2 280 aa20.02■□□□□ 0.8
POLR2J3-204ENST00000486319 LRRC59Q96AG4 307 aaKnown RBP20.02■□□□□ 0.8
POLR2J3-204ENST00000486319 COL16A1Q07092 1604 aaPredicted RBP20.01■□□□□ 0.79
POLR2J3-204ENST00000486319 PHF23Q9BUL5 403 aaPredicted RBP20.01■□□□□ 0.79
POLR2J3-204ENST00000486319 PRKRIP1Q9H875 184 aaPredicted RBP20.01■□□□□ 0.79
POLR2J3-204ENST00000486319 MED1Q15648 1581 aaPredicted RBP20.01■□□□□ 0.79
POLR2J3-204ENST00000486319 SBNO2Q9Y2G9 1366 aa19.99■□□□□ 0.79
POLR2J3-204ENST00000486319 FOXO3O43524 673 aa19.99■□□□□ 0.79
POLR2J3-204ENST00000486319 QRICH2Q9H0J4 1663 aa19.98■□□□□ 0.79
POLR2J3-204ENST00000486319 NPHP3Q7Z494 1330 aa19.98■□□□□ 0.79
POLR2J3-204ENST00000486319 ARHGEF28Q8N1W1 1705 aaKnown RBP19.97■□□□□ 0.79
POLR2J3-204ENST00000486319 SOS2Q07890 1332 aaPredicted RBP19.97■□□□□ 0.79
POLR2J3-204ENST00000486319 SPATA31A6Q5VVP1 1343 aa19.97■□□□□ 0.79
POLR2J3-204ENST00000486319 WASLO00401 505 aaPredicted RBP19.97■□□□□ 0.79
POLR2J3-204ENST00000486319 PHF8Q9UPP1 1060 aa19.95■□□□□ 0.78
POLR2J3-204ENST00000486319 CENPJQ9HC77 1338 aaPredicted RBP19.94■□□□□ 0.78
POLR2J3-204ENST00000486319 NHSL1Q5SYE7 1610 aa19.94■□□□□ 0.78
POLR2J3-204ENST00000486319 KTN1Q86UP2 1357 aaKnown RBP19.93■□□□□ 0.78
POLR2J3-204ENST00000486319 XPCQ01831 940 aaPredicted RBP19.93■□□□□ 0.78
POLR2J3-204ENST00000486319 FMN2Q9NZ56 1722 aa19.93■□□□□ 0.78
POLR2J3-204ENST00000486319 NUTM2BA6NNL0 878 aaPredicted RBP19.92■□□□□ 0.78
POLR2J3-204ENST00000486319 NUTM2EB1AL46 878 aaPredicted RBP19.92■□□□□ 0.78
POLR2J3-204ENST00000486319 NUTM2AQ8IVF1 878 aaPredicted RBP19.92■□□□□ 0.78
POLR2J3-204ENST00000486319 ILDR2Q71H61 639 aa19.92■□□□□ 0.78
POLR2J3-204ENST00000486319 ANKARQ7Z5J8 1434 aa19.91■□□□□ 0.78
POLR2J3-204ENST00000486319 MYOM1P52179 1685 aa19.91■□□□□ 0.78
POLR2J3-204ENST00000486319 ADGRB2O60241 1585 aa19.91■□□□□ 0.78
POLR2J3-204ENST00000486319 MEX3CQ5U5Q3 659 aaKnown RBP19.91■□□□□ 0.78
POLR2J3-204ENST00000486319 CDK19Q9BWU1 502 aa19.91■□□□□ 0.78
POLR2J3-204ENST00000486319 PNPLA6Q8IY17 1366 aa19.9■□□□□ 0.78
POLR2J3-204ENST00000486319 PMFBP1Q8TBY8 1022 aa19.9■□□□□ 0.78
POLR2J3-204ENST00000486319 PSME1Q06323 249 aa19.89■□□□□ 0.77
POLR2J3-204ENST00000486319 KRT28Q7Z3Y7 464 aa19.89■□□□□ 0.77
POLR2J3-204ENST00000486319 PRR36Q9H6K5 1346 aa19.88■□□□□ 0.77
POLR2J3-204ENST00000486319 NUDT16Q96DE0 195 aaKnown RBP19.87■□□□□ 0.77
POLR2J3-204ENST00000486319 RGS17Q9UGC6 210 aaPredicted RBP19.87■□□□□ 0.77
POLR2J3-204ENST00000486319 SHPRHQ149N8 1683 aa19.87■□□□□ 0.77
POLR2J3-204ENST00000486319 PXDNQ92626 1479 aa19.87■□□□□ 0.77
POLR2J3-204ENST00000486319 PER1O15534 1290 aaPredicted RBP19.86■□□□□ 0.77
POLR2J3-204ENST00000486319 RALBP1Q15311 655 aa19.86■□□□□ 0.77
POLR2J3-204ENST00000486319 PANK3Q9H999 370 aa19.86■□□□□ 0.77
POLR2J3-204ENST00000486319 TULP4Q9NRJ4 1543 aa19.86■□□□□ 0.77
POLR2J3-204ENST00000486319 LRP6O75581 1613 aa19.85■□□□□ 0.77
POLR2J3-204ENST00000486319 SRPK2P78362 688 aaKnown RBP19.84■□□□□ 0.77
POLR2J3-204ENST00000486319 NGDNQ8NEJ9 315 aaKnown RBP19.84■□□□□ 0.77
POLR2J3-204ENST00000486319 KIF1AQ12756 1690 aa19.84■□□□□ 0.77
POLR2J3-204ENST00000486319 MRS2Q9HD23 443 aa19.83■□□□□ 0.77
POLR2J3-204ENST00000486319 CCDC61Q9Y6R9 512 aa19.83■□□□□ 0.77
POLR2J3-204ENST00000486319 SPATA31A3Q5VYP0 1347 aa19.83■□□□□ 0.77
POLR2J3-204ENST00000486319 USP32Q8NFA0 1604 aa19.82■□□□□ 0.76
POLR2J3-204ENST00000486319 PUS7Q96PZ0 661 aaKnown RBP19.82■□□□□ 0.76
POLR2J3-204ENST00000486319 RGPD8O14715 1765 aaPredicted RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms