RNA–Protein interactions for RNA: ENST00000486259.1

PPM1F-207, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 3

Gene PPM1F, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-207ENST00000486259 CFAP70Q5T0N1 1121 aa21.68■■□□□ 1.06
PPM1F-207ENST00000486259 NHSL1Q5SYE7 1610 aa21.67■■□□□ 1.06
PPM1F-207ENST00000486259 PCGF6Q9BYE7 350 aa21.66■■□□□ 1.06
PPM1F-207ENST00000486259 PRAG1Q86YV5 1406 aa21.65■■□□□ 1.06
PPM1F-207ENST00000486259 LRPPRCP42704 1394 aaKnown RBP21.65■■□□□ 1.06
PPM1F-207ENST00000486259 KDM2AQ9Y2K7 1162 aa21.65■■□□□ 1.06
PPM1F-207ENST00000486259 SHPRHQ149N8 1683 aa21.64■■□□□ 1.05
PPM1F-207ENST00000486259 MEX3CQ5U5Q3 659 aaKnown RBP21.64■■□□□ 1.05
PPM1F-207ENST00000486259 NRXN1Q9ULB1 1477 aa21.64■■□□□ 1.05
PPM1F-207ENST00000486259 C14orf93Q9H972 538 aaKnown RBP21.63■■□□□ 1.05
PPM1F-207ENST00000486259 YTHDC2Q9H6S0 1430 aaKnown RBP21.63■■□□□ 1.05
PPM1F-207ENST00000486259 SPATA31A6Q5VVP1 1343 aa21.62■■□□□ 1.05
PPM1F-207ENST00000486259 KIAA1210Q9ULL0 1709 aa21.62■■□□□ 1.05
PPM1F-207ENST00000486259 SAFB2Q14151 953 aaKnown RBP eCLIP21.61■■□□□ 1.05
PPM1F-207ENST00000486259 ABCC11Q96J66 1382 aa21.61■■□□□ 1.05
PPM1F-207ENST00000486259 DCAF11Q8TEB1 546 aa21.6■■□□□ 1.05
PPM1F-207ENST00000486259 TECPR2O15040 1411 aa21.6■■□□□ 1.05
PPM1F-207ENST00000486259 XPCQ01831 940 aaPredicted RBP21.59■■□□□ 1.05
PPM1F-207ENST00000486259 ESCO1Q5FWF5 840 aa21.59■■□□□ 1.05
PPM1F-207ENST00000486259 KNDC1Q76NI1 1749 aa21.59■■□□□ 1.05
PPM1F-207ENST00000486259 LRRC59Q96AG4 307 aaKnown RBP21.59■■□□□ 1.05
PPM1F-207ENST00000486259 PNPLA6Q8IY17 1366 aa21.57■■□□□ 1.04
PPM1F-207ENST00000486259 CDC42BPGQ6DT37 1551 aa21.57■■□□□ 1.04
PPM1F-207ENST00000486259 PRAM1Q96QH2 718 aa21.55■■□□□ 1.04
PPM1F-207ENST00000486259 TONSLQ96HA7 1378 aa21.54■■□□□ 1.04
PPM1F-207ENST00000486259 FOXO3O43524 673 aa21.54■■□□□ 1.04
PPM1F-207ENST00000486259 SOS2Q07890 1332 aaPredicted RBP21.54■■□□□ 1.04
PPM1F-207ENST00000486259 ADAMTS2O95450 1211 aa21.53■■□□□ 1.04
PPM1F-207ENST00000486259 TRAK1Q9UPV9 953 aa21.52■■□□□ 1.04
PPM1F-207ENST00000486259 C8orf37Q96NL8 207 aa21.51■■□□□ 1.03
PPM1F-207ENST00000486259 TIMELESSQ9UNS1 1208 aa21.51■■□□□ 1.03
PPM1F-207ENST00000486259 FMN2Q9NZ56 1722 aa21.51■■□□□ 1.03
PPM1F-207ENST00000486259 RGPD8O14715 1765 aaPredicted RBP21.5■■□□□ 1.03
PPM1F-207ENST00000486259 AFF2P51816 1311 aa21.5■■□□□ 1.03
PPM1F-207ENST00000486259 ADGRB1O14514 1584 aa21.49■■□□□ 1.03
PPM1F-207ENST00000486259 HIRIP3Q9BW71 556 aaPredicted RBP21.49■■□□□ 1.03
PPM1F-207ENST00000486259 POGKQ9P215 609 aa21.49■■□□□ 1.03
PPM1F-207ENST00000486259 PXDNQ92626 1479 aa21.47■■□□□ 1.03
PPM1F-207ENST00000486259 DLC1Q96QB1 1528 aa21.46■■□□□ 1.03
PPM1F-207ENST00000486259 PLEKHG5O94827 1062 aa21.46■■□□□ 1.03
PPM1F-207ENST00000486259 ZNF772Q68DY9 489 aaPredicted RBP21.46■■□□□ 1.03
PPM1F-207ENST00000486259 SIRT1Q96EB6 747 aa21.46■■□□□ 1.03
PPM1F-207ENST00000486259 NPHP3Q7Z494 1330 aa21.46■■□□□ 1.03
PPM1F-207ENST00000486259 NEUROD1Q13562 356 aa21.45■■□□□ 1.02
PPM1F-207ENST00000486259 MINK1Q8N4C8 1332 aaPredicted RBP21.45■■□□□ 1.02
PPM1F-207ENST00000486259 CCER1Q8TC90 406 aaPredicted RBP21.42■■□□□ 1.02
PPM1F-207ENST00000486259 NGLY1Q96IV0 654 aa21.42■■□□□ 1.02
PPM1F-207ENST00000486259 PMFBP1Q8TBY8 1022 aa21.41■■□□□ 1.02
PPM1F-207ENST00000486259 PHF8Q9UPP1 1060 aa21.41■■□□□ 1.02
PPM1F-207ENST00000486259 KRT28Q7Z3Y7 464 aa21.4■■□□□ 1.02
PPM1F-207ENST00000486259 L3MBTL2Q969R5 705 aa21.4■■□□□ 1.02
PPM1F-207ENST00000486259 SIN3AQ96ST3 1273 aa21.4■■□□□ 1.02
PPM1F-207ENST00000486259 TRPM1Q7Z4N2 1603 aa21.4■■□□□ 1.02
PPM1F-207ENST00000486259 USP32Q8NFA0 1604 aa21.4■■□□□ 1.02
PPM1F-207ENST00000486259 RXRBP28702 533 aa21.39■■□□□ 1.01
PPM1F-207ENST00000486259 EIF3AQ14152 1382 aaKnown RBP21.38■■□□□ 1.01
PPM1F-207ENST00000486259 COL22A1Q8NFW1 1626 aaPredicted RBP21.38■■□□□ 1.01
PPM1F-207ENST00000486259 NBPF1Q3BBV0 1214 aa21.38■■□□□ 1.01
PPM1F-207ENST00000486259 QTRT2Q9H974 415 aaKnown RBP21.38■■□□□ 1.01
PPM1F-207ENST00000486259 KIF1AQ12756 1690 aa21.37■■□□□ 1.01
PPM1F-207ENST00000486259 PRR36Q9H6K5 1346 aa21.36■■□□□ 1.01
PPM1F-207ENST00000486259 ARHGEF28Q8N1W1 1705 aaKnown RBP21.35■■□□□ 1.01
PPM1F-207ENST00000486259 SPATA31A3Q5VYP0 1347 aa21.35■■□□□ 1.01
PPM1F-207ENST00000486259 LMOD2Q6P5Q4 547 aa21.35■■□□□ 1.01
PPM1F-207ENST00000486259 CABLES1Q8TDN4 633 aa21.35■■□□□ 1.01
PPM1F-207ENST00000486259 USP21Q9UK80 565 aa21.34■■□□□ 1.01
PPM1F-207ENST00000486259 ADGRB2O60241 1585 aa21.34■■□□□ 1.01
PPM1F-207ENST00000486259 ROCK2O75116 1388 aaKnown RBP21.33■■□□□ 1
PPM1F-207ENST00000486259 WASLO00401 505 aaPredicted RBP21.32■■□□□ 1
PPM1F-207ENST00000486259 PSME1Q06323 249 aa21.32■■□□□ 1
PPM1F-207ENST00000486259 RALGAPBQ86X10 1494 aa21.31■■□□□ 1
PPM1F-207ENST00000486259 SLC24A1O60721 1099 aa21.3■■□□□ 1
PPM1F-207ENST00000486259 RGS12O14924 1447 aa21.29■■□□□ 1
PPM1F-207ENST00000486259 RBM6P78332 1123 aaKnown RBP21.29■■□□□ 1
PPM1F-207ENST00000486259 ANKARQ7Z5J8 1434 aa21.29■■□□□ 1
PPM1F-207ENST00000486259 FNBP4Q8N3X1 1017 aaPredicted RBP21.28■■□□□ 1
PPM1F-207ENST00000486259 MARF1Q9Y4F3 1742 aaKnown RBP21.28■■□□□ 1
PPM1F-207ENST00000486259 TNS3Q68CZ2 1445 aa21.28■■□□□ 1
PPM1F-207ENST00000486259 GPRASP1Q5JY77 1395 aa21.27■■□□□ 1
PPM1F-207ENST00000486259 TULP4Q9NRJ4 1543 aa21.27■■□□□ 1
PPM1F-207ENST00000486259 HAP1P54257 671 aaPredicted RBP21.26■□□□□ 0.99
PPM1F-207ENST00000486259 ITSN1Q15811 1721 aa21.26■□□□□ 0.99
PPM1F-207ENST00000486259 BCL9LQ86UU0 1499 aa21.26■□□□□ 0.99
PPM1F-207ENST00000486259 UPF1Q92900 1129 aaKnown RBP eCLIP21.25■□□□□ 0.99
PPM1F-207ENST00000486259 NUDT16Q96DE0 195 aaKnown RBP21.25■□□□□ 0.99
PPM1F-207ENST00000486259 CDK19Q9BWU1 502 aa21.25■□□□□ 0.99
PPM1F-207ENST00000486259 TRPC5Q9UL62 973 aaPredicted RBP21.24■□□□□ 0.99
PPM1F-207ENST00000486259 NGDNQ8NEJ9 315 aaKnown RBP21.23■□□□□ 0.99
PPM1F-207ENST00000486259 QRICH2Q9H0J4 1663 aa21.23■□□□□ 0.99
PPM1F-207ENST00000486259 TRPM3Q9HCF6 1732 aaPredicted RBP21.23■□□□□ 0.99
PPM1F-207ENST00000486259 SBNO1A3KN83 1393 aa21.23■□□□□ 0.99
PPM1F-207ENST00000486259 ATRNO75882 1429 aa21.22■□□□□ 0.99
PPM1F-207ENST00000486259 ATP7BP35670 1465 aa21.22■□□□□ 0.99
PPM1F-207ENST00000486259 CDK12Q9NYV4 1490 aaPredicted RBP21.22■□□□□ 0.99
PPM1F-207ENST00000486259 PAK3O75914 559 aaPredicted RBP21.21■□□□□ 0.99
PPM1F-207ENST00000486259 ABCA3Q99758 1704 aa21.21■□□□□ 0.99
PPM1F-207ENST00000486259 CENPJQ9HC77 1338 aaPredicted RBP21.2■□□□□ 0.98
PPM1F-207ENST00000486259 CARD11Q9BXL7 1154 aa21.19■□□□□ 0.98
PPM1F-207ENST00000486259 ARHGEF10O15013 1369 aa21.18■□□□□ 0.98
PPM1F-207ENST00000486259 ALS2Q96Q42 1657 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms