RNA–Protein interactions for RNA: ENST00000486042.1

PHC3-211, Transcript of polyhomeotic homolog 3, humanhuman

TSL 3

Gene PHC3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-211ENST00000486042 KIFC2Q96AC6 838 aa9.79□□□□□ -0.84
PHC3-211ENST00000486042 TRIM32Q13049 653 aa9.78□□□□□ -0.84
PHC3-211ENST00000486042 GRIPAP1Q4V328 841 aa9.78□□□□□ -0.84
PHC3-211ENST00000486042 LCE2CQ5TA81 110 aa9.78□□□□□ -0.84
PHC3-211ENST00000486042 P3H3Q8IVL6 736 aa9.77□□□□□ -0.85
PHC3-211ENST00000486042 MRGPRX2Q96LB1 330 aa9.77□□□□□ -0.85
PHC3-211ENST00000486042 REPIN1Q9BWE0 567 aaKnown RBP9.77□□□□□ -0.85
PHC3-211ENST00000486042 SEMA3EO15041 775 aa9.76□□□□□ -0.85
PHC3-211ENST00000486042 GNPATO15228 680 aa9.76□□□□□ -0.85
PHC3-211ENST00000486042 FECHP22830 423 aa9.76□□□□□ -0.85
PHC3-211ENST00000486042 FAM181BA6NEQ2 426 aa9.75□□□□□ -0.85
PHC3-211ENST00000486042 J3QL48 77 aa9.75□□□□□ -0.85
PHC3-211ENST00000486042 MMP16P51512 607 aa9.75□□□□□ -0.85
PHC3-211ENST00000486042 TSHZ2Q9NRE2 1034 aa9.75□□□□□ -0.85
PHC3-211ENST00000486042 Q3C1V9 767 aa9.74□□□□□ -0.85
PHC3-211ENST00000486042 RNF19BQ6ZMZ0 732 aa9.74□□□□□ -0.85
PHC3-211ENST00000486042 SLC16A10Q8TF71 515 aa9.73□□□□□ -0.85
PHC3-211ENST00000486042 AMER1Q5JTC6 1135 aaPredicted RBP9.72□□□□□ -0.85
PHC3-211ENST00000486042 HPS1Q92902 700 aa9.72□□□□□ -0.85
PHC3-211ENST00000486042 SMYD5Q6GMV2 418 aa9.7□□□□□ -0.86
PHC3-211ENST00000486042 RBM26Q5T8P6 1007 aaKnown RBP9.69□□□□□ -0.86
PHC3-211ENST00000486042 DXOO77932 396 aaKnown RBP9.68□□□□□ -0.86
PHC3-211ENST00000486042 WNT7BP56706 349 aa9.68□□□□□ -0.86
PHC3-211ENST00000486042 RC3H1Q5TC82 1133 aaKnown RBP9.68□□□□□ -0.86
PHC3-211ENST00000486042 NPAS3Q8IXF0 933 aa9.68□□□□□ -0.86
PHC3-211ENST00000486042 NLRP7Q8WX94 980 aa9.68□□□□□ -0.86
PHC3-211ENST00000486042 NXF1Q9UBU9 619 aaKnown RBP9.68□□□□□ -0.86
PHC3-211ENST00000486042 USB1Q9BQ65 265 aaKnown RBP9.67□□□□□ -0.86
PHC3-211ENST00000486042 TESPA1A2RU30 521 aaPredicted RBP9.66□□□□□ -0.86
PHC3-211ENST00000486042 GPR37O15354 613 aa9.66□□□□□ -0.86
PHC3-211ENST00000486042 PHOX2BQ99453 314 aa9.66□□□□□ -0.86
PHC3-211ENST00000486042 ZSCAN1Q8NBB4 408 aa9.64□□□□□ -0.87
PHC3-211ENST00000486042 SKOR1P84550 965 aa9.63□□□□□ -0.87
PHC3-211ENST00000486042 IRF7Q92985 503 aa9.63□□□□□ -0.87
PHC3-211ENST00000486042 RTN4Q9NQC3 1192 aaKnown RBP9.63□□□□□ -0.87
PHC3-211ENST00000486042 GMPRP36959 345 aa9.62□□□□□ -0.87
PHC3-211ENST00000486042 CCDC24Q8N4L8 307 aa9.62□□□□□ -0.87
PHC3-211ENST00000486042 ALDH1A1P00352 501 aa9.61□□□□□ -0.87
PHC3-211ENST00000486042 CD46P15529 392 aa9.61□□□□□ -0.87
PHC3-211ENST00000486042 LORP23490 312 aaPredicted RBP9.61□□□□□ -0.87
PHC3-211ENST00000486042 LOC100996750A0A140TA64 210 aa9.6□□□□□ -0.87
PHC3-211ENST00000486042 KDM4AO75164 1064 aa9.6□□□□□ -0.87
PHC3-211ENST00000486042 KRTAP4-6Q9BYQ5 205 aa9.6□□□□□ -0.87
PHC3-211ENST00000486042 USP46P62068 366 aa9.59□□□□□ -0.87
PHC3-211ENST00000486042 SIAH2O43255 324 aa9.58□□□□□ -0.88
PHC3-211ENST00000486042 H3BM21 787 aa9.56□□□□□ -0.88
PHC3-211ENST00000486042 CAPN5O15484 640 aaPredicted RBP9.56□□□□□ -0.88
PHC3-211ENST00000486042 TRIM46Q7Z4K8 759 aa9.56□□□□□ -0.88
PHC3-211ENST00000486042 JUNDP17535 347 aa9.54□□□□□ -0.88
PHC3-211ENST00000486042 EHBP1Q8NDI1 1231 aa9.54□□□□□ -0.88
PHC3-211ENST00000486042 WASF2Q9Y6W5 498 aa9.54□□□□□ -0.88
PHC3-211ENST00000486042 BMP1P13497 986 aa9.53□□□□□ -0.88
PHC3-211ENST00000486042 HOXA2O43364 376 aa9.51□□□□□ -0.89
PHC3-211ENST00000486042 VEGFBP49765 207 aa9.5□□□□□ -0.89
PHC3-211ENST00000486042 GPIHBP1Q8IV16 184 aa9.5□□□□□ -0.89
PHC3-211ENST00000486042 HLA-CQ95604 372 aa9.5□□□□□ -0.89
PHC3-211ENST00000486042 ERBB4Q15303 1308 aa9.5□□□□□ -0.89
PHC3-211ENST00000486042 NUDT12Q9BQG2 462 aa9.49□□□□□ -0.89
PHC3-211ENST00000486042 PTCRAQ6ISU1 281 aaPredicted RBP9.48□□□□□ -0.89
PHC3-211ENST00000486042 RETREG3Q86VR2 466 aa9.48□□□□□ -0.89
PHC3-211ENST00000486042 ZFP42Q96MM3 310 aa9.48□□□□□ -0.89
PHC3-211ENST00000486042 SH3BP2P78314 561 aa9.46□□□□□ -0.9
PHC3-211ENST00000486042 MAP2K5Q13163 448 aa9.45□□□□□ -0.9
PHC3-211ENST00000486042 MPNDQ8N594 471 aa9.45□□□□□ -0.9
PHC3-211ENST00000486042 PLEKHG3A1L390 1219 aa9.44□□□□□ -0.9
PHC3-211ENST00000486042 VSIG8P0DPA2 414 aa9.44□□□□□ -0.9
PHC3-211ENST00000486042 MDM2Q00987 491 aaPredicted RBP9.44□□□□□ -0.9
PHC3-211ENST00000486042 SYMPKQ92797 1274 aaKnown RBP9.44□□□□□ -0.9
PHC3-211ENST00000486042 GUCA2AQ02747 115 aa9.43□□□□□ -0.9
PHC3-211ENST00000486042 SCARF1Q14162 830 aa9.43□□□□□ -0.9
PHC3-211ENST00000486042 IRF6O14896 467 aa9.42□□□□□ -0.9
PHC3-211ENST00000486042 CCNYL3P0C7X3 344 aa9.42□□□□□ -0.9
PHC3-211ENST00000486042 SUZ12Q15022 739 aaKnown RBP9.42□□□□□ -0.9
PHC3-211ENST00000486042 MRPL14Q6P1L8 145 aaKnown RBP9.42□□□□□ -0.9
PHC3-211ENST00000486042 MS4A1P11836 297 aa9.4□□□□□ -0.9
PHC3-211ENST00000486042 VARSP26640 1264 aaKnown RBP9.4□□□□□ -0.9
PHC3-211ENST00000486042 KCNMA1Q12791 1236 aa9.4□□□□□ -0.9
PHC3-211ENST00000486042 EVA1BQ9NVM1 165 aa9.4□□□□□ -0.9
PHC3-211ENST00000486042 MINK1Q8N4C8 1332 aaPredicted RBP9.39□□□□□ -0.91
PHC3-211ENST00000486042 PTPRNQ16849 979 aa9.39□□□□□ -0.91
PHC3-211ENST00000486042 NUTM1Q86Y26 1132 aa9.39□□□□□ -0.91
PHC3-211ENST00000486042 UNC93B1Q9H1C4 597 aa9.39□□□□□ -0.91
PHC3-211ENST00000486042 NNTQ13423 1086 aa9.38□□□□□ -0.91
PHC3-211ENST00000486042 PURBQ96QR8 312 aaKnown RBP9.37□□□□□ -0.91
PHC3-211ENST00000486042 GPCPD1Q9NPB8 672 aa9.37□□□□□ -0.91
PHC3-211ENST00000486042 FAM217BQ9NTX9 383 aaPredicted RBP9.37□□□□□ -0.91
PHC3-211ENST00000486042 TLL2Q9Y6L7 1015 aa9.37□□□□□ -0.91
PHC3-211ENST00000486042 C6orf229H3BNL8 230 aa9.36□□□□□ -0.91
PHC3-211ENST00000486042 ADH1CP00326 375 aa9.36□□□□□ -0.91
PHC3-211ENST00000486042 FDX1P10109 184 aa9.36□□□□□ -0.91
PHC3-211ENST00000486042 TIMP2P16035 220 aa9.36□□□□□ -0.91
PHC3-211ENST00000486042 CLCN1P35523 988 aa9.36□□□□□ -0.91
PHC3-211ENST00000486042 BAP1Q92560 729 aa9.36□□□□□ -0.91
PHC3-211ENST00000486042 WDR4P57081 412 aaKnown RBP9.35□□□□□ -0.91
PHC3-211ENST00000486042 KCNH2Q12809 1159 aa9.35□□□□□ -0.91
PHC3-211ENST00000486042 ZNF511Q8NB15 262 aa9.35□□□□□ -0.91
PHC3-211ENST00000486042 KLF16Q9BXK1 252 aaPredicted RBP9.34□□□□□ -0.91
PHC3-211ENST00000486042 PCDHGC3Q9UN70 934 aa9.34□□□□□ -0.91
PHC3-211ENST00000486042 LINC01559Q495D7 138 aa9.33□□□□□ -0.92
PHC3-211ENST00000486042 GSK3AP49840 483 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms