RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 PRDM9Q9NQV7 894 aa10.89□□□□□ -0.67
SMARCC1-207ENST00000485833 GJA5P36382 358 aa10.88□□□□□ -0.67
SMARCC1-207ENST00000485833 RSBN1LQ6PCB5 846 aaPredicted RBP10.87□□□□□ -0.67
SMARCC1-207ENST00000485833 PRKD2Q9BZL6 878 aa10.87□□□□□ -0.67
SMARCC1-207ENST00000485833 SYMPKQ92797 1274 aaKnown RBP10.86□□□□□ -0.67
SMARCC1-207ENST00000485833 V9GY48 417 aaPredicted RBP10.86□□□□□ -0.67
SMARCC1-207ENST00000485833 SPTLC1O15269 473 aa10.85□□□□□ -0.67
SMARCC1-207ENST00000485833 MYSM1Q5VVJ2 828 aa10.85□□□□□ -0.67
SMARCC1-207ENST00000485833 RETREG3Q86VR2 466 aa10.85□□□□□ -0.67
SMARCC1-207ENST00000485833 C6orf229H3BNL8 230 aa10.84□□□□□ -0.67
SMARCC1-207ENST00000485833 MMP16P51512 607 aa10.84□□□□□ -0.67
SMARCC1-207ENST00000485833 RIC3Q7Z5B4 369 aa10.84□□□□□ -0.67
SMARCC1-207ENST00000485833 DDRGK1Q96HY6 314 aa10.84□□□□□ -0.67
SMARCC1-207ENST00000485833 FCF1Q9Y324 198 aaKnown RBP10.84□□□□□ -0.67
SMARCC1-207ENST00000485833 NEUROD2Q15784 382 aa10.83□□□□□ -0.68
SMARCC1-207ENST00000485833 FAM117AQ9C073 453 aa10.83□□□□□ -0.68
SMARCC1-207ENST00000485833 DXOO77932 396 aaKnown RBP10.82□□□□□ -0.68
SMARCC1-207ENST00000485833 MTMR2Q13614 643 aa10.82□□□□□ -0.68
SMARCC1-207ENST00000485833 RSPH6AQ9H0K4 717 aa10.82□□□□□ -0.68
SMARCC1-207ENST00000485833 PLA2G2CQ5R387 149 aa10.81□□□□□ -0.68
SMARCC1-207ENST00000485833 EMID1Q96A84 441 aaPredicted RBP10.81□□□□□ -0.68
SMARCC1-207ENST00000485833 JUNDP17535 347 aa10.8□□□□□ -0.68
SMARCC1-207ENST00000485833 SLC19A1P41440 591 aa10.8□□□□□ -0.68
SMARCC1-207ENST00000485833 LIMD1Q9UGP4 676 aa10.8□□□□□ -0.68
SMARCC1-207ENST00000485833 PCDHB15Q9Y5E8 787 aa10.8□□□□□ -0.68
SMARCC1-207ENST00000485833 SPDYE5A6NIY4 337 aa10.79□□□□□ -0.68
SMARCC1-207ENST00000485833 CLK2P49760 499 aaKnown RBP10.79□□□□□ -0.68
SMARCC1-207ENST00000485833 BRPF1P55201 1214 aaPredicted RBP10.79□□□□□ -0.68
SMARCC1-207ENST00000485833 TUSC1Q2TAM9 212 aa10.79□□□□□ -0.68
SMARCC1-207ENST00000485833 ZBTB3Q9H5J0 574 aa10.79□□□□□ -0.68
SMARCC1-207ENST00000485833 PLEKHG3A1L390 1219 aa10.78□□□□□ -0.68
SMARCC1-207ENST00000485833 PRPF38BQ5VTL8 546 aaKnown RBP10.78□□□□□ -0.68
SMARCC1-207ENST00000485833 LIAT1Q6ZQX7 453 aa10.78□□□□□ -0.68
SMARCC1-207ENST00000485833 PRKCSHP14314 528 aaPredicted RBP10.77□□□□□ -0.69
SMARCC1-207ENST00000485833 HRCP23327 699 aa10.77□□□□□ -0.69
SMARCC1-207ENST00000485833 CSPP1Q1MSJ5 1256 aa10.77□□□□□ -0.69
SMARCC1-207ENST00000485833 SH3D19Q5HYK7 790 aa10.77□□□□□ -0.69
SMARCC1-207ENST00000485833 PRR7Q8TB68 274 aa10.77□□□□□ -0.69
SMARCC1-207ENST00000485833 SPRYD7Q5W111 196 aa10.75□□□□□ -0.69
SMARCC1-207ENST00000485833 CABLES1Q8TDN4 633 aa10.75□□□□□ -0.69
SMARCC1-207ENST00000485833 IRX2Q9BZI1 471 aaPredicted RBP10.75□□□□□ -0.69
SMARCC1-207ENST00000485833 POLR3EQ9NVU0 708 aa10.75□□□□□ -0.69
SMARCC1-207ENST00000485833 RPIAP49247 311 aa10.74□□□□□ -0.69
SMARCC1-207ENST00000485833 SKIV2LQ15477 1246 aaKnown RBP10.74□□□□□ -0.69
SMARCC1-207ENST00000485833 DESI1Q6ICB0 168 aa10.74□□□□□ -0.69
SMARCC1-207ENST00000485833 LILRB3O75022 631 aa10.73□□□□□ -0.69
SMARCC1-207ENST00000485833 QPCTQ16769 361 aa10.73□□□□□ -0.69
SMARCC1-207ENST00000485833 ZNF598Q86UK7 904 aaKnown RBP10.73□□□□□ -0.69
SMARCC1-207ENST00000485833 NUDT12Q9BQG2 462 aa10.73□□□□□ -0.69
SMARCC1-207ENST00000485833 CFAP99D6REC4 459 aa10.72□□□□□ -0.69
SMARCC1-207ENST00000485833 ZNF697Q5TEC3 545 aa10.72□□□□□ -0.69
SMARCC1-207ENST00000485833 CCDC24Q8N4L8 307 aa10.72□□□□□ -0.69
SMARCC1-207ENST00000485833 NUTM2BA6NNL0 878 aaPredicted RBP10.71□□□□□ -0.69
SMARCC1-207ENST00000485833 NUTM2EB1AL46 878 aaPredicted RBP10.71□□□□□ -0.69
SMARCC1-207ENST00000485833 ZBTB24O43167 697 aaPredicted RBP10.71□□□□□ -0.69
SMARCC1-207ENST00000485833 PTPRNQ16849 979 aa10.71□□□□□ -0.69
SMARCC1-207ENST00000485833 NUTM2DQ5VT03 806 aaPredicted RBP10.71□□□□□ -0.69
SMARCC1-207ENST00000485833 NUTM2AQ8IVF1 878 aaPredicted RBP10.71□□□□□ -0.69
SMARCC1-207ENST00000485833 CCNYL3P0C7X3 344 aa10.69□□□□□ -0.7
SMARCC1-207ENST00000485833 CD2BP2O95400 341 aaKnown RBP10.68□□□□□ -0.7
SMARCC1-207ENST00000485833 IL27Q8NEV9 243 aa10.68□□□□□ -0.7
SMARCC1-207ENST00000485833 TRIM32Q13049 653 aa10.67□□□□□ -0.7
SMARCC1-207ENST00000485833 LAPTM4AQ15012 233 aa10.67□□□□□ -0.7
SMARCC1-207ENST00000485833 RTL5Q5HYW3 569 aaPredicted RBP10.67□□□□□ -0.7
SMARCC1-207ENST00000485833 PROCA1Q8NCQ7 364 aaPredicted RBP10.67□□□□□ -0.7
SMARCC1-207ENST00000485833 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.67□□□□□ -0.7
SMARCC1-207ENST00000485833 GOPCQ9HD26 462 aa10.67□□□□□ -0.7
SMARCC1-207ENST00000485833 LYPD8Q6UX82 237 aa10.66□□□□□ -0.7
SMARCC1-207ENST00000485833 TRIM67Q6ZTA4 783 aa10.66□□□□□ -0.7
SMARCC1-207ENST00000485833 TSC1Q92574 1164 aa10.66□□□□□ -0.7
SMARCC1-207ENST00000485833 PDZRN3Q9UPQ7 1066 aa10.66□□□□□ -0.7
SMARCC1-207ENST00000485833 GFRA3O60609 400 aa10.65□□□□□ -0.7
SMARCC1-207ENST00000485833 HELBQ8NG08 1087 aaPredicted RBP10.65□□□□□ -0.7
SMARCC1-207ENST00000485833 EVA1BQ9NVM1 165 aa10.65□□□□□ -0.7
SMARCC1-207ENST00000485833 ATP1B4Q9UN42 357 aaPredicted RBP10.65□□□□□ -0.7
SMARCC1-207ENST00000485833 NRG2O14511 850 aaPredicted RBP10.63□□□□□ -0.71
SMARCC1-207ENST00000485833 GDF9O60383 454 aa10.63□□□□□ -0.71
SMARCC1-207ENST00000485833 PRR20EP86478 221 aa10.63□□□□□ -0.71
SMARCC1-207ENST00000485833 PRR20CP86479 221 aa10.63□□□□□ -0.71
SMARCC1-207ENST00000485833 PRR20DP86480 221 aa10.63□□□□□ -0.71
SMARCC1-207ENST00000485833 PRR20BP86481 221 aa10.63□□□□□ -0.71
SMARCC1-207ENST00000485833 PRR20AP86496 221 aa10.63□□□□□ -0.71
SMARCC1-207ENST00000485833 KCNH2Q12809 1159 aa10.63□□□□□ -0.71
SMARCC1-207ENST00000485833 PTCRAQ6ISU1 281 aaPredicted RBP10.63□□□□□ -0.71
SMARCC1-207ENST00000485833 PPP2R2DQ66LE6 453 aa10.62□□□□□ -0.71
SMARCC1-207ENST00000485833 PCMTD1Q96MG8 357 aaPredicted RBP10.62□□□□□ -0.71
SMARCC1-207ENST00000485833 PKD2L1Q9P0L9 805 aa10.62□□□□□ -0.71
SMARCC1-207ENST00000485833 PER1O15534 1290 aaPredicted RBP10.61□□□□□ -0.71
SMARCC1-207ENST00000485833 FBXO31Q5XUX0 539 aaPredicted RBP10.61□□□□□ -0.71
SMARCC1-207ENST00000485833 UNC93B1Q9H1C4 597 aa10.61□□□□□ -0.71
SMARCC1-207ENST00000485833 TNFRSF10AO00220 468 aa10.6□□□□□ -0.71
SMARCC1-207ENST00000485833 F12P00748 615 aaPredicted RBP10.6□□□□□ -0.71
SMARCC1-207ENST00000485833 FOXC1Q12948 553 aa10.6□□□□□ -0.71
SMARCC1-207ENST00000485833 CTHP32929 405 aa10.59□□□□□ -0.71
SMARCC1-207ENST00000485833 WNT7BP56706 349 aa10.59□□□□□ -0.71
SMARCC1-207ENST00000485833 MAP10Q9P2G4 905 aa10.58□□□□□ -0.72
SMARCC1-207ENST00000485833 WNT7AO00755 349 aa10.57□□□□□ -0.72
SMARCC1-207ENST00000485833 SKOR1P84550 965 aa10.57□□□□□ -0.72
SMARCC1-207ENST00000485833 CTDSPL2Q05D32 466 aa10.56□□□□□ -0.72
SMARCC1-207ENST00000485833 Q6ZNB5 142 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms