RNA–Protein interactions for RNA: ENST00000485781.5

MDH1-213, Transcript of malate dehydrogenase 1, humanhuman

TSL 2

Gene MDH1, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-213ENST00000485781 HFM1A2PYH4 1435 aa17.47■□□□□ 0.39
MDH1-213ENST00000485781 COL22A1Q8NFW1 1626 aaPredicted RBP17.45■□□□□ 0.38
MDH1-213ENST00000485781 MYOM2P54296 1465 aa17.44■□□□□ 0.38
MDH1-213ENST00000485781 XPCQ01831 940 aaPredicted RBP17.44■□□□□ 0.38
MDH1-213ENST00000485781 GJD4Q96KN9 370 aaPredicted RBP17.44■□□□□ 0.38
MDH1-213ENST00000485781 RPGRIP1LQ68CZ1 1315 aa17.44■□□□□ 0.38
MDH1-213ENST00000485781 FOXO3O43524 673 aa17.43■□□□□ 0.38
MDH1-213ENST00000485781 PPARGC1BQ86YN6 1023 aaKnown RBP17.43■□□□□ 0.38
MDH1-213ENST00000485781 LRPPRCP42704 1394 aaKnown RBP17.42■□□□□ 0.38
MDH1-213ENST00000485781 BCL9LQ86UU0 1499 aa17.42■□□□□ 0.38
MDH1-213ENST00000485781 PRAG1Q86YV5 1406 aa17.41■□□□□ 0.38
MDH1-213ENST00000485781 NUTM2FA1L443 756 aa17.4■□□□□ 0.38
MDH1-213ENST00000485781 SF3B2Q13435 895 aaKnown RBP17.4■□□□□ 0.38
MDH1-213ENST00000485781 PXDNQ92626 1479 aa17.39■□□□□ 0.37
MDH1-213ENST00000485781 MARF1Q9Y4F3 1742 aaKnown RBP17.39■□□□□ 0.37
MDH1-213ENST00000485781 UNC5CLQ8IV45 518 aa17.39■□□□□ 0.37
MDH1-213ENST00000485781 CDC42BPGQ6DT37 1551 aa17.39■□□□□ 0.37
MDH1-213ENST00000485781 HAP1P54257 671 aaPredicted RBP17.38■□□□□ 0.37
MDH1-213ENST00000485781 STK26Q9P289 416 aa17.38■□□□□ 0.37
MDH1-213ENST00000485781 BLMP54132 1417 aaPredicted RBP17.38■□□□□ 0.37
MDH1-213ENST00000485781 SLC4A1APQ9BWU0 796 aaKnown RBP17.37■□□□□ 0.37
MDH1-213ENST00000485781 EP400Q96L91 3159 aa17.37■□□□□ 0.37
MDH1-213ENST00000485781 NAIPQ13075 1403 aa17.37■□□□□ 0.37
MDH1-213ENST00000485781 RALGAPBQ86X10 1494 aa17.35■□□□□ 0.37
MDH1-213ENST00000485781 PPLO60437 1756 aa17.35■□□□□ 0.37
MDH1-213ENST00000485781 WAPLQ7Z5K2 1190 aa17.34■□□□□ 0.37
MDH1-213ENST00000485781 DEFB132Q7Z7B7 95 aa17.34■□□□□ 0.37
MDH1-213ENST00000485781 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.34■□□□□ 0.37
MDH1-213ENST00000485781 CCDC9Q9Y3X0 531 aaKnown RBP17.34■□□□□ 0.37
MDH1-213ENST00000485781 SPATA31A3Q5VYP0 1347 aa17.33■□□□□ 0.36
MDH1-213ENST00000485781 SLIT2O94813 1529 aa17.32■□□□□ 0.36
MDH1-213ENST00000485781 KRT28Q7Z3Y7 464 aa17.32■□□□□ 0.36
MDH1-213ENST00000485781 GLI3P10071 1580 aa17.32■□□□□ 0.36
MDH1-213ENST00000485781 CCDC144AA2RUR9 1427 aa17.31■□□□□ 0.36
MDH1-213ENST00000485781 ADGRF5Q8IZF2 1346 aa17.31■□□□□ 0.36
MDH1-213ENST00000485781 PLEKHG5O94827 1062 aa17.31■□□□□ 0.36
MDH1-213ENST00000485781 RGL3Q3MIN7 710 aa17.31■□□□□ 0.36
MDH1-213ENST00000485781 SEPT12Q8IYM1 358 aa17.31■□□□□ 0.36
MDH1-213ENST00000485781 RRBP1Q9P2E9 1410 aaKnown RBP17.3■□□□□ 0.36
MDH1-213ENST00000485781 A0A0G2JS52 829 aa17.29■□□□□ 0.36
MDH1-213ENST00000485781 MYT1Q01538 1121 aa17.29■□□□□ 0.36
MDH1-213ENST00000485781 PSME1Q06323 249 aa17.29■□□□□ 0.36
MDH1-213ENST00000485781 VPS72Q15906 364 aa17.28■□□□□ 0.36
MDH1-213ENST00000485781 TMEM132EQ6IEE7 984 aa17.28■□□□□ 0.36
MDH1-213ENST00000485781 LMOD2Q6P5Q4 547 aa17.28■□□□□ 0.36
MDH1-213ENST00000485781 KIF1AQ12756 1690 aa17.28■□□□□ 0.36
MDH1-213ENST00000485781 TECPR2O15040 1411 aa17.28■□□□□ 0.36
MDH1-213ENST00000485781 USP32Q8NFA0 1604 aa17.28■□□□□ 0.36
MDH1-213ENST00000485781 BRWD3Q6RI45 1802 aa17.28■□□□□ 0.36
MDH1-213ENST00000485781 ABCC11Q96J66 1382 aa17.28■□□□□ 0.36
MDH1-213ENST00000485781 KRT27Q7Z3Y8 459 aa17.27■□□□□ 0.36
MDH1-213ENST00000485781 PLEKHH1Q9ULM0 1364 aa17.27■□□□□ 0.35
MDH1-213ENST00000485781 BAG6P46379 1132 aa17.26■□□□□ 0.35
MDH1-213ENST00000485781 CABLES1Q8TDN4 633 aa17.26■□□□□ 0.35
MDH1-213ENST00000485781 PHF8Q9UPP1 1060 aa17.26■□□□□ 0.35
MDH1-213ENST00000485781 FMN2Q9NZ56 1722 aa17.26■□□□□ 0.35
MDH1-213ENST00000485781 ANKRD30BQ9BXX2 1392 aa17.26■□□□□ 0.35
MDH1-213ENST00000485781 TNS3Q68CZ2 1445 aa17.25■□□□□ 0.35
MDH1-213ENST00000485781 PSDA5PKW4 1024 aaPredicted RBP17.23■□□□□ 0.35
MDH1-213ENST00000485781 KNDC1Q76NI1 1749 aa17.23■□□□□ 0.35
MDH1-213ENST00000485781 YTHDC2Q9H6S0 1430 aaKnown RBP17.22■□□□□ 0.35
MDH1-213ENST00000485781 LRP5O75197 1615 aa17.21■□□□□ 0.35
MDH1-213ENST00000485781 ARHGEF10O15013 1369 aa17.21■□□□□ 0.35
MDH1-213ENST00000485781 ONECUT3O60422 494 aaPredicted RBP17.21■□□□□ 0.35
MDH1-213ENST00000485781 PLCH1Q4KWH8 1693 aa17.2■□□□□ 0.34
MDH1-213ENST00000485781 SBNO1A3KN83 1393 aa17.2■□□□□ 0.34
MDH1-213ENST00000485781 NWD2Q9ULI1 1742 aa17.2■□□□□ 0.34
MDH1-213ENST00000485781 FAM98CQ17RN3 349 aaKnown RBP17.19■□□□□ 0.34
MDH1-213ENST00000485781 SIRT1Q96EB6 747 aa17.19■□□□□ 0.34
MDH1-213ENST00000485781 PIK3C2GO75747 1445 aa17.19■□□□□ 0.34
MDH1-213ENST00000485781 HRCP23327 699 aa17.18■□□□□ 0.34
MDH1-213ENST00000485781 SAFB2Q14151 953 aaKnown RBP eCLIP17.18■□□□□ 0.34
MDH1-213ENST00000485781 SPATA31E1Q6ZUB1 1445 aa17.18■□□□□ 0.34
MDH1-213ENST00000485781 IFT172Q9UG01 1749 aa17.18■□□□□ 0.34
MDH1-213ENST00000485781 RGPD8O14715 1765 aaPredicted RBP17.17■□□□□ 0.34
MDH1-213ENST00000485781 DHX57Q6P158 1386 aaKnown RBP17.17■□□□□ 0.34
MDH1-213ENST00000485781 FAM83GA6ND36 823 aa17.17■□□□□ 0.34
MDH1-213ENST00000485781 PMFBP1Q8TBY8 1022 aa17.17■□□□□ 0.34
MDH1-213ENST00000485781 NRXN1Q9ULB1 1477 aa17.17■□□□□ 0.34
MDH1-213ENST00000485781 EN1Q05925 392 aaPredicted RBP17.15■□□□□ 0.34
MDH1-213ENST00000485781 PRAM1Q96QH2 718 aa17.15■□□□□ 0.34
MDH1-213ENST00000485781 BTG4Q9NY30 223 aa17.15■□□□□ 0.34
MDH1-213ENST00000485781 POGKQ9P215 609 aa17.15■□□□□ 0.34
MDH1-213ENST00000485781 ABCA3Q99758 1704 aa17.14■□□□□ 0.33
MDH1-213ENST00000485781 MPHOSPH9Q99550 1183 aa17.14■□□□□ 0.33
MDH1-213ENST00000485781 C14orf93Q9H972 538 aaKnown RBP17.14■□□□□ 0.33
MDH1-213ENST00000485781 R3HDM1Q15032 1099 aaKnown RBP17.12■□□□□ 0.33
MDH1-213ENST00000485781 CFAP70Q5T0N1 1121 aa17.12■□□□□ 0.33
MDH1-213ENST00000485781 GPRASP1Q5JY77 1395 aa17.12■□□□□ 0.33
MDH1-213ENST00000485781 FAM182BQ5T319 152 aa17.11■□□□□ 0.33
MDH1-213ENST00000485781 ANKARQ7Z5J8 1434 aa17.11■□□□□ 0.33
MDH1-213ENST00000485781 RGPD1P0DJD0 1748 aa17.1■□□□□ 0.33
MDH1-213ENST00000485781 NRAPQ86VF7 1730 aa17.09■□□□□ 0.33
MDH1-213ENST00000485781 COL14A1Q05707 1796 aaKnown RBP17.08■□□□□ 0.33
MDH1-213ENST00000485781 SPATA31A5Q5VU36 1347 aa17.08■□□□□ 0.32
MDH1-213ENST00000485781 SPATA31A7Q8IWB4 1347 aa17.08■□□□□ 0.32
MDH1-213ENST00000485781 EIF3AQ14152 1382 aaKnown RBP17.07■□□□□ 0.32
MDH1-213ENST00000485781 PAK3O75914 559 aaPredicted RBP17.07■□□□□ 0.32
MDH1-213ENST00000485781 HIRIP3Q9BW71 556 aaPredicted RBP17.07■□□□□ 0.32
MDH1-213ENST00000485781 PRDM11Q9NQV5 511 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 327.1 ms