RNA–Protein interactions for RNA: ENST00000485607.1

CLRN1-206, Transcript of clarin 1, humanhuman

TSL 1 (best)

Gene CLRN1, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-206ENST00000485607 ZNF777Q9ULD5 760 aaPredicted RBP11.98□□□□□ -0.49
CLRN1-206ENST00000485607 KIDINS220Q9ULH0 1771 aa11.97□□□□□ -0.49
CLRN1-206ENST00000485607 THSD4Q6ZMP0 1018 aa11.97□□□□□ -0.49
CLRN1-206ENST00000485607 ANO8Q9HCE9 1232 aaPredicted RBP11.97□□□□□ -0.49
CLRN1-206ENST00000485607 CEP162Q5TB80 1403 aa11.96□□□□□ -0.49
CLRN1-206ENST00000485607 ADAM33Q9BZ11 813 aa11.96□□□□□ -0.49
CLRN1-206ENST00000485607 AGLP35573 1532 aa11.96□□□□□ -0.5
CLRN1-206ENST00000485607 BHMG1C9JSJ3 638 aaPredicted RBP11.95□□□□□ -0.5
CLRN1-206ENST00000485607 HNRNPMP52272 730 aaKnown RBP eCLIP11.95□□□□□ -0.5
CLRN1-206ENST00000485607 NBPF3Q9H094 633 aa11.95□□□□□ -0.5
CLRN1-206ENST00000485607 MTUS2Q5JR59 1369 aa11.94□□□□□ -0.5
CLRN1-206ENST00000485607 PREX1Q8TCU6 1659 aa11.94□□□□□ -0.5
CLRN1-206ENST00000485607 CCNB3Q8WWL7 1395 aa11.93□□□□□ -0.5
CLRN1-206ENST00000485607 GTPBP6O43824 516 aaPredicted RBP11.93□□□□□ -0.5
CLRN1-206ENST00000485607 FBXO41Q8TF61 875 aa11.93□□□□□ -0.5
CLRN1-206ENST00000485607 TIAM1Q13009 1591 aa11.92□□□□□ -0.5
CLRN1-206ENST00000485607 SPAG9O60271 1321 aaKnown RBP11.92□□□□□ -0.5
CLRN1-206ENST00000485607 ZNF644Q9H582 1327 aaPredicted RBP11.92□□□□□ -0.5
CLRN1-206ENST00000485607 CFDP1Q9UEE9 299 aaPredicted RBP11.92□□□□□ -0.5
CLRN1-206ENST00000485607 KIAA1107Q9UPP5 1409 aa11.92□□□□□ -0.5
CLRN1-206ENST00000485607 INO80Q9ULG1 1556 aaPredicted RBP11.92□□□□□ -0.5
CLRN1-206ENST00000485607 ATP7AQ04656 1500 aa11.91□□□□□ -0.5
CLRN1-206ENST00000485607 EHBP1L1Q8N3D4 1523 aa11.91□□□□□ -0.5
CLRN1-206ENST00000485607 C3P01024 1663 aa11.91□□□□□ -0.5
CLRN1-206ENST00000485607 PLEKHH2Q8IVE3 1493 aa11.89□□□□□ -0.51
CLRN1-206ENST00000485607 PLXNC1O60486 1568 aa11.89□□□□□ -0.51
CLRN1-206ENST00000485607 UHRF1BP1Q6BDS2 1440 aa11.89□□□□□ -0.51
CLRN1-206ENST00000485607 MBD5Q9P267 1494 aa11.89□□□□□ -0.51
CLRN1-206ENST00000485607 A2MP01023 1474 aa11.88□□□□□ -0.51
CLRN1-206ENST00000485607 SUPT6HQ7KZ85 1726 aaKnown RBP11.87□□□□□ -0.51
CLRN1-206ENST00000485607 NCOA2Q15596 1464 aa11.87□□□□□ -0.51
CLRN1-206ENST00000485607 STRCQ7RTU9 1775 aa11.87□□□□□ -0.51
CLRN1-206ENST00000485607 CNTLNQ9NXG0 1405 aa11.86□□□□□ -0.51
CLRN1-206ENST00000485607 LOC105371045A0A1W2PR82 267 aa11.86□□□□□ -0.51
CLRN1-206ENST00000485607 ESF1Q9H501 851 aaKnown RBP11.86□□□□□ -0.51
CLRN1-206ENST00000485607 PPP1R3GB7ZBB8 358 aa11.85□□□□□ -0.51
CLRN1-206ENST00000485607 ANKK1Q8NFD2 765 aa11.85□□□□□ -0.51
CLRN1-206ENST00000485607 EMILIN3Q9NT22 766 aa11.85□□□□□ -0.51
CLRN1-206ENST00000485607 PCDHGA10Q9Y5H3 936 aa11.85□□□□□ -0.51
CLRN1-206ENST00000485607 RGS20O76081 388 aa11.84□□□□□ -0.51
CLRN1-206ENST00000485607 PROX2Q3B8N5 592 aa11.84□□□□□ -0.51
CLRN1-206ENST00000485607 IFFO2Q5TF58 517 aa11.84□□□□□ -0.51
CLRN1-206ENST00000485607 CERKQ8TCT0 537 aa11.84□□□□□ -0.51
CLRN1-206ENST00000485607 ZMYM3Q14202 1370 aa11.83□□□□□ -0.52
CLRN1-206ENST00000485607 MFSD10Q14728 455 aa11.83□□□□□ -0.52
CLRN1-206ENST00000485607 IRX2Q9BZI1 471 aaPredicted RBP11.83□□□□□ -0.52
CLRN1-206ENST00000485607 RABGEF1Q9UJ41 708 aa11.83□□□□□ -0.52
CLRN1-206ENST00000485607 MROH2AA6NES4 1674 aa11.83□□□□□ -0.52
CLRN1-206ENST00000485607 CLTCQ00610 1675 aaKnown RBP11.83□□□□□ -0.52
CLRN1-206ENST00000485607 CAMSAP2Q08AD1 1489 aa11.83□□□□□ -0.52
CLRN1-206ENST00000485607 A0A0G2JS52 829 aa11.82□□□□□ -0.52
CLRN1-206ENST00000485607 TYW1BQ6NUM6 668 aa11.82□□□□□ -0.52
CLRN1-206ENST00000485607 NPATQ14207 1427 aa11.82□□□□□ -0.52
CLRN1-206ENST00000485607 VPS8Q8N3P4 1428 aa11.82□□□□□ -0.52
CLRN1-206ENST00000485607 ADGBQ8N7X0 1667 aa11.81□□□□□ -0.52
CLRN1-206ENST00000485607 NCOA1Q15788 1441 aa11.81□□□□□ -0.52
CLRN1-206ENST00000485607 COL9A1P20849 921 aa11.81□□□□□ -0.52
CLRN1-206ENST00000485607 GGT6Q6P531 493 aa11.81□□□□□ -0.52
CLRN1-206ENST00000485607 CCDC141Q6ZP82 1450 aa11.81□□□□□ -0.52
CLRN1-206ENST00000485607 RTEL1-TNFRSF6BF6WH68 1400 aa11.8□□□□□ -0.52
CLRN1-206ENST00000485607 PTPRKQ15262 1439 aa11.8□□□□□ -0.52
CLRN1-206ENST00000485607 FBXW7Q969H0 707 aa11.8□□□□□ -0.52
CLRN1-206ENST00000485607 LRRC9Q6ZRR7 1453 aa11.8□□□□□ -0.52
CLRN1-206ENST00000485607 PHF14O94880 888 aa11.79□□□□□ -0.52
CLRN1-206ENST00000485607 SETD1BQ9UPS6 1966 aaKnown RBP11.79□□□□□ -0.52
CLRN1-206ENST00000485607 DHX29Q7Z478 1369 aaKnown RBP11.79□□□□□ -0.52
CLRN1-206ENST00000485607 CAMSAP1Q5T5Y3 1602 aa11.78□□□□□ -0.52
CLRN1-206ENST00000485607 MYO3AQ8NEV4 1616 aa11.78□□□□□ -0.52
CLRN1-206ENST00000485607 PTPRTO14522 1441 aa11.78□□□□□ -0.52
CLRN1-206ENST00000485607 BCAMP50895 628 aa11.78□□□□□ -0.52
CLRN1-206ENST00000485607 KANK4Q5T7N3 995 aaPredicted RBP11.78□□□□□ -0.52
CLRN1-206ENST00000485607 KIAA1468Q9P260 1216 aa11.77□□□□□ -0.53
CLRN1-206ENST00000485607 ARHGEF5Q12774 1597 aa11.76□□□□□ -0.53
CLRN1-206ENST00000485607 CEP170BQ9Y4F5 1589 aaPredicted RBP11.76□□□□□ -0.53
CLRN1-206ENST00000485607 CADPS2Q86UW7 1296 aa11.76□□□□□ -0.53
CLRN1-206ENST00000485607 LTBP4Q8N2S1 1624 aa11.75□□□□□ -0.53
CLRN1-206ENST00000485607 ZNF142P52746 1687 aaPredicted RBP11.75□□□□□ -0.53
CLRN1-206ENST00000485607 KIF3BO15066 747 aa11.75□□□□□ -0.53
CLRN1-206ENST00000485607 LAPTM4BQ86VI4 370 aa11.74□□□□□ -0.53
CLRN1-206ENST00000485607 MAP3K1Q13233 1512 aa11.73□□□□□ -0.53
CLRN1-206ENST00000485607 FBXO31Q5XUX0 539 aaPredicted RBP11.73□□□□□ -0.53
CLRN1-206ENST00000485607 RBM33Q96EV2 1170 aaKnown RBP11.73□□□□□ -0.53
CLRN1-206ENST00000485607 ZFRQ96KR1 1074 aaKnown RBP11.73□□□□□ -0.53
CLRN1-206ENST00000485607 KDM5DQ9BY66 1539 aa11.73□□□□□ -0.53
CLRN1-206ENST00000485607 PLA2R1Q13018 1463 aa11.72□□□□□ -0.53
CLRN1-206ENST00000485607 TCOF1Q13428 1488 aaKnown RBP11.72□□□□□ -0.53
CLRN1-206ENST00000485607 SOWAHBA6NEL2 793 aa11.72□□□□□ -0.53
CLRN1-206ENST00000485607 C6orf132Q5T0Z8 1188 aa11.72□□□□□ -0.53
CLRN1-206ENST00000485607 EPAS1Q99814 870 aa11.72□□□□□ -0.53
CLRN1-206ENST00000485607 SEPT9Q9UHD8 586 aaPredicted RBP11.72□□□□□ -0.53
CLRN1-206ENST00000485607 PZPP20742 1482 aa11.71□□□□□ -0.53
CLRN1-206ENST00000485607 MYOM3Q5VTT5 1437 aa11.71□□□□□ -0.53
CLRN1-206ENST00000485607 DPYSL4O14531 572 aa11.71□□□□□ -0.53
CLRN1-206ENST00000485607 RSPH4AQ5TD94 716 aa11.71□□□□□ -0.53
CLRN1-206ENST00000485607 MAST1Q9Y2H9 1570 aa11.71□□□□□ -0.54
CLRN1-206ENST00000485607 A2ML1A8K2U0 1454 aa11.7□□□□□ -0.54
CLRN1-206ENST00000485607 TNRQ92752 1358 aa11.7□□□□□ -0.54
CLRN1-206ENST00000485607 ZNF335Q9H4Z2 1342 aaPredicted RBP11.7□□□□□ -0.54
CLRN1-206ENST00000485607 DNMT1P26358 1616 aaKnown RBP11.7□□□□□ -0.54
CLRN1-206ENST00000485607 WASHC2CQ9Y4E1 1318 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms