RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 NUTM2BA6NNL0 878 aaPredicted RBP17.64■□□□□ 0.41
TRA2B-213ENST00000485530 NUTM2EB1AL46 878 aaPredicted RBP17.64■□□□□ 0.41
TRA2B-213ENST00000485530 NUTM2AQ8IVF1 878 aaPredicted RBP17.64■□□□□ 0.41
TRA2B-213ENST00000485530 PIK3C2GO75747 1445 aa17.64■□□□□ 0.41
TRA2B-213ENST00000485530 SETBP1Q9Y6X0 1596 aa17.63■□□□□ 0.41
TRA2B-213ENST00000485530 TMEM132EQ6IEE7 984 aa17.63■□□□□ 0.41
TRA2B-213ENST00000485530 TONSLQ96HA7 1378 aa17.62■□□□□ 0.41
TRA2B-213ENST00000485530 PTPRUQ92729 1446 aa17.62■□□□□ 0.41
TRA2B-213ENST00000485530 NBPF1Q3BBV0 1214 aa17.6■□□□□ 0.41
TRA2B-213ENST00000485530 MST1RQ04912 1400 aa17.6■□□□□ 0.41
TRA2B-213ENST00000485530 XRN1Q8IZH2 1706 aaKnown RBP17.6■□□□□ 0.41
TRA2B-213ENST00000485530 PRAG1Q86YV5 1406 aa17.59■□□□□ 0.41
TRA2B-213ENST00000485530 TIMELESSQ9UNS1 1208 aa17.59■□□□□ 0.41
TRA2B-213ENST00000485530 AMOTL2Q9Y2J4 779 aa17.58■□□□□ 0.4
TRA2B-213ENST00000485530 RBM6P78332 1123 aaKnown RBP17.57■□□□□ 0.4
TRA2B-213ENST00000485530 PNPLA6Q8IY17 1366 aa17.56■□□□□ 0.4
TRA2B-213ENST00000485530 C8orf37Q96NL8 207 aa17.56■□□□□ 0.4
TRA2B-213ENST00000485530 QTRT2Q9H974 415 aaKnown RBP17.55■□□□□ 0.4
TRA2B-213ENST00000485530 STK26Q9P289 416 aa17.54■□□□□ 0.4
TRA2B-213ENST00000485530 LRRC59Q96AG4 307 aaKnown RBP17.53■□□□□ 0.4
TRA2B-213ENST00000485530 ATAD2Q6PL18 1390 aa17.53■□□□□ 0.4
TRA2B-213ENST00000485530 ADGRB1O14514 1584 aa17.51■□□□□ 0.39
TRA2B-213ENST00000485530 DDX17Q92841 729 aaKnown RBP17.51■□□□□ 0.39
TRA2B-213ENST00000485530 NALCNQ8IZF0 1738 aa17.5■□□□□ 0.39
TRA2B-213ENST00000485530 ADGRL3Q9HAR2 1447 aa17.5■□□□□ 0.39
TRA2B-213ENST00000485530 LRPPRCP42704 1394 aaKnown RBP17.5■□□□□ 0.39
TRA2B-213ENST00000485530 ABCC11Q96J66 1382 aa17.5■□□□□ 0.39
TRA2B-213ENST00000485530 ROBO2Q9HCK4 1378 aa17.5■□□□□ 0.39
TRA2B-213ENST00000485530 YTHDC2Q9H6S0 1430 aaKnown RBP17.49■□□□□ 0.39
TRA2B-213ENST00000485530 WAPLQ7Z5K2 1190 aa17.49■□□□□ 0.39
TRA2B-213ENST00000485530 LAMC1P11047 1609 aa17.49■□□□□ 0.39
TRA2B-213ENST00000485530 EP400Q96L91 3159 aa17.49■□□□□ 0.39
TRA2B-213ENST00000485530 TRAK1Q9UPV9 953 aa17.48■□□□□ 0.39
TRA2B-213ENST00000485530 NGLY1Q96IV0 654 aa17.47■□□□□ 0.39
TRA2B-213ENST00000485530 PLEKHH1Q9ULM0 1364 aa17.46■□□□□ 0.39
TRA2B-213ENST00000485530 ADAMTS2O95450 1211 aa17.46■□□□□ 0.39
TRA2B-213ENST00000485530 SIRT1Q96EB6 747 aa17.45■□□□□ 0.38
TRA2B-213ENST00000485530 TECPR2O15040 1411 aa17.45■□□□□ 0.38
TRA2B-213ENST00000485530 C1orf167Q5SNV9 1468 aa17.44■□□□□ 0.38
TRA2B-213ENST00000485530 TRPM1Q7Z4N2 1603 aa17.44■□□□□ 0.38
TRA2B-213ENST00000485530 ZRANB1Q9UGI0 708 aa17.44■□□□□ 0.38
TRA2B-213ENST00000485530 GPRASP1Q5JY77 1395 aa17.43■□□□□ 0.38
TRA2B-213ENST00000485530 PRAM1Q96QH2 718 aa17.43■□□□□ 0.38
TRA2B-213ENST00000485530 ATRNO75882 1429 aa17.43■□□□□ 0.38
TRA2B-213ENST00000485530 KIAA1210Q9ULL0 1709 aa17.43■□□□□ 0.38
TRA2B-213ENST00000485530 ROCK2O75116 1388 aaKnown RBP17.42■□□□□ 0.38
TRA2B-213ENST00000485530 PTCH1Q13635 1447 aa17.42■□□□□ 0.38
TRA2B-213ENST00000485530 USP21Q9UK80 565 aa17.42■□□□□ 0.38
TRA2B-213ENST00000485530 TRPC5Q9UL62 973 aaPredicted RBP17.42■□□□□ 0.38
TRA2B-213ENST00000485530 COL22A1Q8NFW1 1626 aaPredicted RBP17.41■□□□□ 0.38
TRA2B-213ENST00000485530 CARD11Q9BXL7 1154 aa17.41■□□□□ 0.38
TRA2B-213ENST00000485530 RALGAPBQ86X10 1494 aa17.41■□□□□ 0.38
TRA2B-213ENST00000485530 SAFB2Q14151 953 aaKnown RBP eCLIP17.4■□□□□ 0.38
TRA2B-213ENST00000485530 FNBP4Q8N3X1 1017 aaPredicted RBP17.4■□□□□ 0.38
TRA2B-213ENST00000485530 SOS2Q07890 1332 aaPredicted RBP17.4■□□□□ 0.38
TRA2B-213ENST00000485530 POGKQ9P215 609 aa17.37■□□□□ 0.37
TRA2B-213ENST00000485530 DLC1Q96QB1 1528 aa17.37■□□□□ 0.37
TRA2B-213ENST00000485530 BCL9LQ86UU0 1499 aa17.35■□□□□ 0.37
TRA2B-213ENST00000485530 KNDC1Q76NI1 1749 aa17.34■□□□□ 0.37
TRA2B-213ENST00000485530 ORAI2Q96SN7 254 aa17.34■□□□□ 0.37
TRA2B-213ENST00000485530 HIRIP3Q9BW71 556 aaPredicted RBP17.34■□□□□ 0.37
TRA2B-213ENST00000485530 MARF1Q9Y4F3 1742 aaKnown RBP17.33■□□□□ 0.37
TRA2B-213ENST00000485530 MINK1Q8N4C8 1332 aaPredicted RBP17.33■□□□□ 0.36
TRA2B-213ENST00000485530 CCDC125Q86Z20 511 aa17.33■□□□□ 0.36
TRA2B-213ENST00000485530 ST20-MTHFSA0A0A6YYL1 179 aa17.32■□□□□ 0.36
TRA2B-213ENST00000485530 CENPJQ9HC77 1338 aaPredicted RBP17.31■□□□□ 0.36
TRA2B-213ENST00000485530 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.31■□□□□ 0.36
TRA2B-213ENST00000485530 ARHGEF28Q8N1W1 1705 aaKnown RBP17.3■□□□□ 0.36
TRA2B-213ENST00000485530 LRP5O75197 1615 aa17.3■□□□□ 0.36
TRA2B-213ENST00000485530 TESK2Q96S53 571 aa17.3■□□□□ 0.36
TRA2B-213ENST00000485530 PXDNQ92626 1479 aa17.3■□□□□ 0.36
TRA2B-213ENST00000485530 BLMP54132 1417 aaPredicted RBP17.29■□□□□ 0.36
TRA2B-213ENST00000485530 GLI3P10071 1580 aa17.28■□□□□ 0.36
TRA2B-213ENST00000485530 NUTM2FA1L443 756 aa17.28■□□□□ 0.36
TRA2B-213ENST00000485530 CDC42BPGQ6DT37 1551 aa17.28■□□□□ 0.36
TRA2B-213ENST00000485530 USP47Q96K76 1375 aa17.28■□□□□ 0.36
TRA2B-213ENST00000485530 WASLO00401 505 aaPredicted RBP17.27■□□□□ 0.36
TRA2B-213ENST00000485530 HSPA5P11021 654 aaKnown RBP17.27■□□□□ 0.36
TRA2B-213ENST00000485530 GJD4Q96KN9 370 aaPredicted RBP17.27■□□□□ 0.36
TRA2B-213ENST00000485530 CDK19Q9BWU1 502 aa17.27■□□□□ 0.36
TRA2B-213ENST00000485530 NPHP3Q7Z494 1330 aa17.25■□□□□ 0.35
TRA2B-213ENST00000485530 PRR36Q9H6K5 1346 aa17.24■□□□□ 0.35
TRA2B-213ENST00000485530 SLIT2O94813 1529 aa17.23■□□□□ 0.35
TRA2B-213ENST00000485530 ZEB1P37275 1124 aaPredicted RBP17.23■□□□□ 0.35
TRA2B-213ENST00000485530 EIF4G2P78344 907 aaKnown RBP eCLIP17.23■□□□□ 0.35
TRA2B-213ENST00000485530 CABP2Q9NPB3 220 aa17.23■□□□□ 0.35
TRA2B-213ENST00000485530 EIF3AQ14152 1382 aaKnown RBP17.23■□□□□ 0.35
TRA2B-213ENST00000485530 BRWD3Q6RI45 1802 aa17.23■□□□□ 0.35
TRA2B-213ENST00000485530 DEFB132Q7Z7B7 95 aa17.22■□□□□ 0.35
TRA2B-213ENST00000485530 SBNO2Q9Y2G9 1366 aa17.2■□□□□ 0.34
TRA2B-213ENST00000485530 C11orf95C9JLR9 678 aaPredicted RBP17.2■□□□□ 0.34
TRA2B-213ENST00000485530 XPCQ01831 940 aaPredicted RBP17.2■□□□□ 0.34
TRA2B-213ENST00000485530 ESCO1Q5FWF5 840 aa17.2■□□□□ 0.34
TRA2B-213ENST00000485530 NUDT16Q96DE0 195 aaKnown RBP17.2■□□□□ 0.34
TRA2B-213ENST00000485530 USP32Q8NFA0 1604 aa17.2■□□□□ 0.34
TRA2B-213ENST00000485530 TULP4Q9NRJ4 1543 aa17.2■□□□□ 0.34
TRA2B-213ENST00000485530 QRICH2Q9H0J4 1663 aa17.2■□□□□ 0.34
TRA2B-213ENST00000485530 ADGRB2O60241 1585 aa17.19■□□□□ 0.34
TRA2B-213ENST00000485530 UNC5CLQ8IV45 518 aa17.19■□□□□ 0.34
TRA2B-213ENST00000485530 FOXO3O43524 673 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms