RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 ABCC2Q92887 1545 aa8.73□□□□□ -1.01
NHLRC3-205ENST00000485407 KIAA0556O60303 1618 aa8.72□□□□□ -1.01
NHLRC3-205ENST00000485407 OSBPP22059 807 aa8.72□□□□□ -1.01
NHLRC3-205ENST00000485407 UPF1Q92900 1129 aaKnown RBP eCLIP8.72□□□□□ -1.01
NHLRC3-205ENST00000485407 EPRSP07814 1512 aaKnown RBP8.71□□□□□ -1.01
NHLRC3-205ENST00000485407 SH3D19Q5HYK7 790 aa8.71□□□□□ -1.02
NHLRC3-205ENST00000485407 ANKRD13DQ6ZTN6 518 aa8.71□□□□□ -1.02
NHLRC3-205ENST00000485407 AXIN2Q9Y2T1 843 aa8.71□□□□□ -1.02
NHLRC3-205ENST00000485407 POM121Q96HA1 1249 aa8.7□□□□□ -1.02
NHLRC3-205ENST00000485407 UHRF1BP1LA0JNW5 1464 aa8.7□□□□□ -1.02
NHLRC3-205ENST00000485407 EFCAB5A4FU69 1503 aa8.7□□□□□ -1.02
NHLRC3-205ENST00000485407 SAMD9Q5K651 1589 aa8.69□□□□□ -1.02
NHLRC3-205ENST00000485407 PTGER2P43116 358 aa8.69□□□□□ -1.02
NHLRC3-205ENST00000485407 RNF166Q96A37 237 aaPredicted RBP8.69□□□□□ -1.02
NHLRC3-205ENST00000485407 MYT1LQ9UL68 1186 aa8.69□□□□□ -1.02
NHLRC3-205ENST00000485407 UACAQ9BZF9 1416 aa8.69□□□□□ -1.02
NHLRC3-205ENST00000485407 ARHGAP33O14559 1287 aa8.68□□□□□ -1.02
NHLRC3-205ENST00000485407 PPP4R3BQ5MIZ7 849 aa8.68□□□□□ -1.02
NHLRC3-205ENST00000485407 DDX12PQ92771 950 aa8.68□□□□□ -1.02
NHLRC3-205ENST00000485407 FNBP4Q8N3X1 1017 aaPredicted RBP8.67□□□□□ -1.02
NHLRC3-205ENST00000485407 REPIN1Q9BWE0 567 aaKnown RBP8.67□□□□□ -1.02
NHLRC3-205ENST00000485407 SKIV2LQ15477 1246 aaKnown RBP8.66□□□□□ -1.02
NHLRC3-205ENST00000485407 RETREG2Q8NC44 543 aa8.65□□□□□ -1.02
NHLRC3-205ENST00000485407 MADDQ8WXG6 1647 aa8.65□□□□□ -1.03
NHLRC3-205ENST00000485407 KDM5BQ9UGL1 1544 aa8.64□□□□□ -1.03
NHLRC3-205ENST00000485407 CLCN1P35523 988 aa8.64□□□□□ -1.03
NHLRC3-205ENST00000485407 PTGDRQ13258 359 aa8.64□□□□□ -1.03
NHLRC3-205ENST00000485407 TMCO4Q5TGY1 634 aa8.64□□□□□ -1.03
NHLRC3-205ENST00000485407 ABCA8O94911 1581 aa8.64□□□□□ -1.03
NHLRC3-205ENST00000485407 IQSEC2Q5JU85 1478 aa8.64□□□□□ -1.03
NHLRC3-205ENST00000485407 FMN1Q68DA7 1419 aa8.63□□□□□ -1.03
NHLRC3-205ENST00000485407 BCORL1Q5H9F3 1711 aa8.63□□□□□ -1.03
NHLRC3-205ENST00000485407 TTBK1Q5TCY1 1321 aaPredicted RBP8.63□□□□□ -1.03
NHLRC3-205ENST00000485407 PSEN2P49810 448 aa8.63□□□□□ -1.03
NHLRC3-205ENST00000485407 DMRTA1Q5VZB9 504 aa8.63□□□□□ -1.03
NHLRC3-205ENST00000485407 PROCA1Q8NCQ7 364 aaPredicted RBP8.63□□□□□ -1.03
NHLRC3-205ENST00000485407 GZF1Q9H116 711 aaPredicted RBP8.63□□□□□ -1.03
NHLRC3-205ENST00000485407 ANO8Q9HCE9 1232 aaPredicted RBP8.63□□□□□ -1.03
NHLRC3-205ENST00000485407 MAGI3Q5TCQ9 1506 aa8.63□□□□□ -1.03
NHLRC3-205ENST00000485407 ARHGAP35Q9NRY4 1499 aa8.63□□□□□ -1.03
NHLRC3-205ENST00000485407 EVI5O60447 810 aa8.62□□□□□ -1.03
NHLRC3-205ENST00000485407 MDM2Q00987 491 aaPredicted RBP8.62□□□□□ -1.03
NHLRC3-205ENST00000485407 ADGRD1Q6QNK2 874 aa8.62□□□□□ -1.03
NHLRC3-205ENST00000485407 ZNF454Q8N9F8 522 aa8.62□□□□□ -1.03
NHLRC3-205ENST00000485407 POLR3EQ9NVU0 708 aa8.62□□□□□ -1.03
NHLRC3-205ENST00000485407 ZNF330Q9Y3S2 320 aaPredicted RBP8.62□□□□□ -1.03
NHLRC3-205ENST00000485407 FHOD3Q2V2M9 1422 aa8.62□□□□□ -1.03
NHLRC3-205ENST00000485407 YEATS2Q9ULM3 1422 aa8.62□□□□□ -1.03
NHLRC3-205ENST00000485407 SSTR3P32745 418 aaPredicted RBP8.61□□□□□ -1.03
NHLRC3-205ENST00000485407 FOSBP53539 338 aa8.61□□□□□ -1.03
NHLRC3-205ENST00000485407 GPCPD1Q9NPB8 672 aa8.61□□□□□ -1.03
NHLRC3-205ENST00000485407 MTMR7Q9Y216 660 aa8.61□□□□□ -1.03
NHLRC3-205ENST00000485407 MED1Q15648 1581 aaPredicted RBP8.61□□□□□ -1.03
NHLRC3-205ENST00000485407 TK2O00142 265 aa8.6□□□□□ -1.03
NHLRC3-205ENST00000485407 RGS22Q8NE09 1264 aa8.6□□□□□ -1.03
NHLRC3-205ENST00000485407 BEGAINQ9BUH8 593 aa8.6□□□□□ -1.03
NHLRC3-205ENST00000485407 COG6Q9Y2V7 657 aa8.6□□□□□ -1.03
NHLRC3-205ENST00000485407 RAPGEF6Q8TEU7 1601 aa8.6□□□□□ -1.03
NHLRC3-205ENST00000485407 CLIP1P30622 1438 aa8.6□□□□□ -1.03
NHLRC3-205ENST00000485407 SPDYE5A6NIY4 337 aa8.59□□□□□ -1.03
NHLRC3-205ENST00000485407 KCNK17Q96T54 332 aa8.59□□□□□ -1.03
NHLRC3-205ENST00000485407 CD109Q6YHK3 1445 aa8.59□□□□□ -1.03
NHLRC3-205ENST00000485407 ARAP3Q8WWN8 1544 aa8.59□□□□□ -1.03
NHLRC3-205ENST00000485407 RIMS1Q86UR5 1692 aaKnown RBP8.59□□□□□ -1.03
NHLRC3-205ENST00000485407 ZCCHC11Q5TAX3 1644 aaKnown RBP8.58□□□□□ -1.04
NHLRC3-205ENST00000485407 ARID4BQ4LE39 1312 aaPredicted RBP8.58□□□□□ -1.04
NHLRC3-205ENST00000485407 PRIM1P49642 420 aaKnown RBP8.58□□□□□ -1.04
NHLRC3-205ENST00000485407 MFAP1P55081 439 aaKnown RBP8.58□□□□□ -1.04
NHLRC3-205ENST00000485407 TMUB1Q9BVT8 246 aa8.58□□□□□ -1.04
NHLRC3-205ENST00000485407 BCL2L12Q9HB09 334 aa8.58□□□□□ -1.04
NHLRC3-205ENST00000485407 ATP10BO94823 1461 aa8.57□□□□□ -1.04
NHLRC3-205ENST00000485407 ACIN1Q9UKV3 1341 aaKnown RBP8.57□□□□□ -1.04
NHLRC3-205ENST00000485407 LOC105371045A0A1W2PR82 267 aa8.57□□□□□ -1.04
NHLRC3-205ENST00000485407 HRO43593 1189 aa8.57□□□□□ -1.04
NHLRC3-205ENST00000485407 IRF5Q13568 498 aa8.57□□□□□ -1.04
NHLRC3-205ENST00000485407 KCNH8Q96L42 1107 aa8.57□□□□□ -1.04
NHLRC3-205ENST00000485407 LTBP4Q8N2S1 1624 aa8.57□□□□□ -1.04
NHLRC3-205ENST00000485407 NUP153P49790 1475 aaKnown RBP8.57□□□□□ -1.04
NHLRC3-205ENST00000485407 CEP162Q5TB80 1403 aa8.56□□□□□ -1.04
NHLRC3-205ENST00000485407 FBXW7Q969H0 707 aa8.56□□□□□ -1.04
NHLRC3-205ENST00000485407 WDR7Q9Y4E6 1490 aa8.56□□□□□ -1.04
NHLRC3-205ENST00000485407 PTPRTO14522 1441 aa8.55□□□□□ -1.04
NHLRC3-205ENST00000485407 CASKIN1Q8WXD9 1431 aa8.55□□□□□ -1.04
NHLRC3-205ENST00000485407 RBM25P49756 843 aaKnown RBP8.55□□□□□ -1.04
NHLRC3-205ENST00000485407 SNRKQ9NRH2 765 aa8.55□□□□□ -1.04
NHLRC3-205ENST00000485407 CDK11AQ9UQ88 783 aaPredicted RBP8.55□□□□□ -1.04
NHLRC3-205ENST00000485407 CFAP43Q8NDM7 1665 aa8.55□□□□□ -1.04
NHLRC3-205ENST00000485407 STRCQ7RTU9 1775 aa8.55□□□□□ -1.04
NHLRC3-205ENST00000485407 PLEKHD1A6NEE1 506 aa8.54□□□□□ -1.04
NHLRC3-205ENST00000485407 PPP1R15AO75807 674 aaPredicted RBP8.54□□□□□ -1.04
NHLRC3-205ENST00000485407 PTPREP23469 700 aa8.54□□□□□ -1.04
NHLRC3-205ENST00000485407 PDE4CQ08493 712 aa8.54□□□□□ -1.04
NHLRC3-205ENST00000485407 FOXD4L5Q5VV16 416 aaPredicted RBP8.54□□□□□ -1.04
NHLRC3-205ENST00000485407 WWC1Q8IX03 1113 aa8.54□□□□□ -1.04
NHLRC3-205ENST00000485407 BANK1Q8NDB2 785 aa8.54□□□□□ -1.04
NHLRC3-205ENST00000485407 FOXD4L4Q8WXT5 416 aaPredicted RBP8.54□□□□□ -1.04
NHLRC3-205ENST00000485407 ZDHHC16Q969W1 377 aa8.54□□□□□ -1.04
NHLRC3-205ENST00000485407 HECW1Q76N89 1606 aa8.54□□□□□ -1.04
NHLRC3-205ENST00000485407 UBAP1LF5GYI3 381 aa8.53□□□□□ -1.04
NHLRC3-205ENST00000485407 MYSM1Q5VVJ2 828 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms