RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 LAMC1P11047 1609 aa23.35■■□□□ 1.33
SIK3-211ENST00000485363 ORAI2Q96SN7 254 aa23.35■■□□□ 1.33
SIK3-211ENST00000485363 C14orf93Q9H972 538 aaKnown RBP23.35■■□□□ 1.33
SIK3-211ENST00000485363 YTHDC2Q9H6S0 1430 aaKnown RBP23.34■■□□□ 1.33
SIK3-211ENST00000485363 WAPLQ7Z5K2 1190 aa23.34■■□□□ 1.33
SIK3-211ENST00000485363 NUTM2BA6NNL0 878 aaPredicted RBP23.32■■□□□ 1.32
SIK3-211ENST00000485363 NUTM2EB1AL46 878 aaPredicted RBP23.32■■□□□ 1.32
SIK3-211ENST00000485363 NUTM2AQ8IVF1 878 aaPredicted RBP23.32■■□□□ 1.32
SIK3-211ENST00000485363 CFAP70Q5T0N1 1121 aa23.31■■□□□ 1.32
SIK3-211ENST00000485363 DHX57Q6P158 1386 aaKnown RBP23.3■■□□□ 1.32
SIK3-211ENST00000485363 SIRT1Q96EB6 747 aa23.3■■□□□ 1.32
SIK3-211ENST00000485363 PNPLA6Q8IY17 1366 aa23.29■■□□□ 1.32
SIK3-211ENST00000485363 PLEKHH1Q9ULM0 1364 aa23.29■■□□□ 1.32
SIK3-211ENST00000485363 ZNF772Q68DY9 489 aaPredicted RBP23.29■■□□□ 1.32
SIK3-211ENST00000485363 SOS2Q07890 1332 aaPredicted RBP23.29■■□□□ 1.32
SIK3-211ENST00000485363 ESCO1Q5FWF5 840 aa23.28■■□□□ 1.32
SIK3-211ENST00000485363 DCAF11Q8TEB1 546 aa23.25■■□□□ 1.31
SIK3-211ENST00000485363 STAC3Q96MF2 364 aa23.24■■□□□ 1.31
SIK3-211ENST00000485363 NPHP3Q7Z494 1330 aa23.24■■□□□ 1.31
SIK3-211ENST00000485363 FMN2Q9NZ56 1722 aa23.24■■□□□ 1.31
SIK3-211ENST00000485363 NUTM2FA1L443 756 aa23.23■■□□□ 1.31
SIK3-211ENST00000485363 KDM2AQ9Y2K7 1162 aa23.23■■□□□ 1.31
SIK3-211ENST00000485363 DLC1Q96QB1 1528 aa23.2■■□□□ 1.3
SIK3-211ENST00000485363 AFF2P51816 1311 aa23.2■■□□□ 1.3
SIK3-211ENST00000485363 FOXO3O43524 673 aa23.2■■□□□ 1.3
SIK3-211ENST00000485363 PRAM1Q96QH2 718 aa23.2■■□□□ 1.3
SIK3-211ENST00000485363 ADGRB1O14514 1584 aa23.19■■□□□ 1.3
SIK3-211ENST00000485363 PXDNQ92626 1479 aa23.18■■□□□ 1.3
SIK3-211ENST00000485363 C8orf37Q96NL8 207 aa23.18■■□□□ 1.3
SIK3-211ENST00000485363 POGKQ9P215 609 aa23.18■■□□□ 1.3
SIK3-211ENST00000485363 KIF1AQ12756 1690 aa23.17■■□□□ 1.3
SIK3-211ENST00000485363 SAFB2Q14151 953 aaKnown RBP eCLIP23.17■■□□□ 1.3
SIK3-211ENST00000485363 COL22A1Q8NFW1 1626 aaPredicted RBP23.17■■□□□ 1.3
SIK3-211ENST00000485363 ADAMTS2O95450 1211 aa23.16■■□□□ 1.3
SIK3-211ENST00000485363 RXRBP28702 533 aa23.15■■□□□ 1.3
SIK3-211ENST00000485363 XPCQ01831 940 aaPredicted RBP23.15■■□□□ 1.3
SIK3-211ENST00000485363 TRAK1Q9UPV9 953 aa23.15■■□□□ 1.3
SIK3-211ENST00000485363 RGPD8O14715 1765 aaPredicted RBP23.14■■□□□ 1.3
SIK3-211ENST00000485363 NGLY1Q96IV0 654 aa23.13■■□□□ 1.29
SIK3-211ENST00000485363 ADGRB2O60241 1585 aa23.11■■□□□ 1.29
SIK3-211ENST00000485363 PHF8Q9UPP1 1060 aa23.1■■□□□ 1.29
SIK3-211ENST00000485363 ANKARQ7Z5J8 1434 aa23.08■■□□□ 1.29
SIK3-211ENST00000485363 KRT28Q7Z3Y7 464 aa23.08■■□□□ 1.29
SIK3-211ENST00000485363 QTRT2Q9H974 415 aaKnown RBP23.08■■□□□ 1.29
SIK3-211ENST00000485363 CDK12Q9NYV4 1490 aaPredicted RBP23.08■■□□□ 1.29
SIK3-211ENST00000485363 SPATA31A3Q5VYP0 1347 aa23.07■■□□□ 1.28
SIK3-211ENST00000485363 PSME1Q06323 249 aa23.06■■□□□ 1.28
SIK3-211ENST00000485363 MINK1Q8N4C8 1332 aaPredicted RBP23.06■■□□□ 1.28
SIK3-211ENST00000485363 MARF1Q9Y4F3 1742 aaKnown RBP23.05■■□□□ 1.28
SIK3-211ENST00000485363 EIF3AQ14152 1382 aaKnown RBP23.05■■□□□ 1.28
SIK3-211ENST00000485363 USP32Q8NFA0 1604 aa23.05■■□□□ 1.28
SIK3-211ENST00000485363 RBM6P78332 1123 aaKnown RBP23.05■■□□□ 1.28
SIK3-211ENST00000485363 HIRIP3Q9BW71 556 aaPredicted RBP23.05■■□□□ 1.28
SIK3-211ENST00000485363 USP21Q9UK80 565 aa23.05■■□□□ 1.28
SIK3-211ENST00000485363 ARHGEF28Q8N1W1 1705 aaKnown RBP23.04■■□□□ 1.28
SIK3-211ENST00000485363 KIAA1210Q9ULL0 1709 aa23.04■■□□□ 1.28
SIK3-211ENST00000485363 FNBP4Q8N3X1 1017 aaPredicted RBP23.03■■□□□ 1.28
SIK3-211ENST00000485363 TNS3Q68CZ2 1445 aa23.01■■□□□ 1.27
SIK3-211ENST00000485363 WASLO00401 505 aaPredicted RBP23.01■■□□□ 1.27
SIK3-211ENST00000485363 PMFBP1Q8TBY8 1022 aa23.01■■□□□ 1.27
SIK3-211ENST00000485363 TRPC5Q9UL62 973 aaPredicted RBP23.01■■□□□ 1.27
SIK3-211ENST00000485363 TULP4Q9NRJ4 1543 aa23.01■■□□□ 1.27
SIK3-211ENST00000485363 SBNO1A3KN83 1393 aa23■■□□□ 1.27
SIK3-211ENST00000485363 RGS12O14924 1447 aa22.98■■□□□ 1.27
SIK3-211ENST00000485363 PRR36Q9H6K5 1346 aa22.97■■□□□ 1.27
SIK3-211ENST00000485363 ARHGEF10O15013 1369 aa22.96■■□□□ 1.27
SIK3-211ENST00000485363 ATRNO75882 1429 aa22.96■■□□□ 1.27
SIK3-211ENST00000485363 HAP1P54257 671 aaPredicted RBP22.95■■□□□ 1.26
SIK3-211ENST00000485363 GPRASP1Q5JY77 1395 aa22.95■■□□□ 1.26
SIK3-211ENST00000485363 LMOD2Q6P5Q4 547 aa22.95■■□□□ 1.26
SIK3-211ENST00000485363 UPF1Q92900 1129 aaKnown RBP eCLIP22.95■■□□□ 1.26
SIK3-211ENST00000485363 BCL9LQ86UU0 1499 aa22.94■■□□□ 1.26
SIK3-211ENST00000485363 NBPF1Q3BBV0 1214 aa22.93■■□□□ 1.26
SIK3-211ENST00000485363 ITSN1Q15811 1721 aa22.93■■□□□ 1.26
SIK3-211ENST00000485363 TRPM3Q9HCF6 1732 aaPredicted RBP22.92■■□□□ 1.26
SIK3-211ENST00000485363 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.91■■□□□ 1.26
SIK3-211ENST00000485363 NGDNQ8NEJ9 315 aaKnown RBP22.91■■□□□ 1.26
SIK3-211ENST00000485363 CABLES1Q8TDN4 633 aa22.91■■□□□ 1.26
SIK3-211ENST00000485363 L3MBTL2Q969R5 705 aa22.91■■□□□ 1.26
SIK3-211ENST00000485363 PLEKHG5O94827 1062 aa22.9■■□□□ 1.26
SIK3-211ENST00000485363 NUDT16Q96DE0 195 aaKnown RBP22.9■■□□□ 1.26
SIK3-211ENST00000485363 SIN3AQ96ST3 1273 aa22.9■■□□□ 1.26
SIK3-211ENST00000485363 SLIT2O94813 1529 aa22.9■■□□□ 1.26
SIK3-211ENST00000485363 ABCA3Q99758 1704 aa22.9■■□□□ 1.26
SIK3-211ENST00000485363 ATP7BP35670 1465 aa22.9■■□□□ 1.26
SIK3-211ENST00000485363 CDK19Q9BWU1 502 aa22.89■■□□□ 1.25
SIK3-211ENST00000485363 ALS2Q96Q42 1657 aa22.88■■□□□ 1.25
SIK3-211ENST00000485363 UNC5CLQ8IV45 518 aa22.88■■□□□ 1.25
SIK3-211ENST00000485363 NEUROD1Q13562 356 aa22.87■■□□□ 1.25
SIK3-211ENST00000485363 GJD4Q96KN9 370 aaPredicted RBP22.87■■□□□ 1.25
SIK3-211ENST00000485363 CENPJQ9HC77 1338 aaPredicted RBP22.84■■□□□ 1.25
SIK3-211ENST00000485363 PLCH1Q4KWH8 1693 aa22.84■■□□□ 1.25
SIK3-211ENST00000485363 PAK3O75914 559 aaPredicted RBP22.84■■□□□ 1.25
SIK3-211ENST00000485363 NWD2Q9ULI1 1742 aa22.84■■□□□ 1.25
SIK3-211ENST00000485363 TOPAZ1Q8N9V7 1692 aa22.84■■□□□ 1.25
SIK3-211ENST00000485363 CCDC61Q9Y6R9 512 aa22.83■■□□□ 1.25
SIK3-211ENST00000485363 ATAD2Q6PL18 1390 aa22.83■■□□□ 1.25
SIK3-211ENST00000485363 TRPM1Q7Z4N2 1603 aa22.82■■□□□ 1.24
SIK3-211ENST00000485363 QRICH2Q9H0J4 1663 aa22.81■■□□□ 1.24
SIK3-211ENST00000485363 RALGAPBQ86X10 1494 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms