RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 NEUROD1Q13562 356 aa11.29□□□□□ -0.6
MACF1-220ENST00000485063 C19orf44Q9H6X5 657 aa11.29□□□□□ -0.6
MACF1-220ENST00000485063 C14orf93Q9H972 538 aaKnown RBP11.29□□□□□ -0.6
MACF1-220ENST00000485063 NRXN1Q9ULB1 1477 aa11.29□□□□□ -0.6
MACF1-220ENST00000485063 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.29□□□□□ -0.6
MACF1-220ENST00000485063 PTCH1Q13635 1447 aa11.28□□□□□ -0.6
MACF1-220ENST00000485063 CADPS2Q86UW7 1296 aa11.28□□□□□ -0.6
MACF1-220ENST00000485063 KNDC1Q76NI1 1749 aa11.27□□□□□ -0.61
MACF1-220ENST00000485063 CFAP70Q5T0N1 1121 aa11.27□□□□□ -0.61
MACF1-220ENST00000485063 TMEM132EQ6IEE7 984 aa11.27□□□□□ -0.61
MACF1-220ENST00000485063 SIN3AQ96ST3 1273 aa11.27□□□□□ -0.61
MACF1-220ENST00000485063 STK26Q9P289 416 aa11.27□□□□□ -0.61
MACF1-220ENST00000485063 LRPPRCP42704 1394 aaKnown RBP11.26□□□□□ -0.61
MACF1-220ENST00000485063 DCCP43146 1447 aa11.26□□□□□ -0.61
MACF1-220ENST00000485063 PRAG1Q86YV5 1406 aa11.26□□□□□ -0.61
MACF1-220ENST00000485063 YTHDC2Q9H6S0 1430 aaKnown RBP11.26□□□□□ -0.61
MACF1-220ENST00000485063 SLAIN2Q9P270 581 aa11.25□□□□□ -0.61
MACF1-220ENST00000485063 NALCNQ8IZF0 1738 aa11.25□□□□□ -0.61
MACF1-220ENST00000485063 ABCC11Q96J66 1382 aa11.25□□□□□ -0.61
MACF1-220ENST00000485063 ADGRL3Q9HAR2 1447 aa11.25□□□□□ -0.61
MACF1-220ENST00000485063 ROBO1Q9Y6N7 1651 aa11.24□□□□□ -0.61
MACF1-220ENST00000485063 KIAA1210Q9ULL0 1709 aa11.24□□□□□ -0.61
MACF1-220ENST00000485063 ZBTB22O15209 634 aa11.24□□□□□ -0.61
MACF1-220ENST00000485063 ROBO2Q9HCK4 1378 aa11.24□□□□□ -0.61
MACF1-220ENST00000485063 TECPR2O15040 1411 aa11.24□□□□□ -0.61
MACF1-220ENST00000485063 FAM135BQ49AJ0 1406 aa11.24□□□□□ -0.61
MACF1-220ENST00000485063 ASXL1Q8IXJ9 1541 aa11.24□□□□□ -0.61
MACF1-220ENST00000485063 TONSLQ96HA7 1378 aa11.23□□□□□ -0.61
MACF1-220ENST00000485063 REM2Q8IYK8 340 aaPredicted RBP11.22□□□□□ -0.61
MACF1-220ENST00000485063 L3MBTL2Q969R5 705 aa11.22□□□□□ -0.61
MACF1-220ENST00000485063 SIRT1Q96EB6 747 aa11.22□□□□□ -0.61
MACF1-220ENST00000485063 POGKQ9P215 609 aa11.22□□□□□ -0.61
MACF1-220ENST00000485063 HSPA1LP34931 641 aa11.21□□□□□ -0.61
MACF1-220ENST00000485063 DLC1Q96QB1 1528 aa11.2□□□□□ -0.62
MACF1-220ENST00000485063 WAPLQ7Z5K2 1190 aa11.2□□□□□ -0.62
MACF1-220ENST00000485063 TRAK1Q9UPV9 953 aa11.2□□□□□ -0.62
MACF1-220ENST00000485063 PHLPP1O60346 1717 aa11.2□□□□□ -0.62
MACF1-220ENST00000485063 ADGRB1O14514 1584 aa11.2□□□□□ -0.62
MACF1-220ENST00000485063 PRAM1Q96QH2 718 aa11.19□□□□□ -0.62
MACF1-220ENST00000485063 CDC42BPGQ6DT37 1551 aa11.19□□□□□ -0.62
MACF1-220ENST00000485063 MST1RQ04912 1400 aa11.18□□□□□ -0.62
MACF1-220ENST00000485063 CLSPNQ9HAW4 1339 aa11.18□□□□□ -0.62
MACF1-220ENST00000485063 HAX1O00165 279 aa11.17□□□□□ -0.62
MACF1-220ENST00000485063 SAFB2Q14151 953 aaKnown RBP eCLIP11.17□□□□□ -0.62
MACF1-220ENST00000485063 ARHGEF28Q8N1W1 1705 aaKnown RBP11.17□□□□□ -0.62
MACF1-220ENST00000485063 TRPM1Q7Z4N2 1603 aa11.17□□□□□ -0.62
MACF1-220ENST00000485063 PLEKHH1Q9ULM0 1364 aa11.16□□□□□ -0.62
MACF1-220ENST00000485063 BRINP3Q76B58 766 aa11.16□□□□□ -0.62
MACF1-220ENST00000485063 CCER1Q8TC90 406 aaPredicted RBP11.16□□□□□ -0.62
MACF1-220ENST00000485063 C1orf167Q5SNV9 1468 aa11.16□□□□□ -0.62
MACF1-220ENST00000485063 FMN2Q9NZ56 1722 aa11.15□□□□□ -0.62
MACF1-220ENST00000485063 NBPF1Q3BBV0 1214 aa11.15□□□□□ -0.62
MACF1-220ENST00000485063 ROCK2O75116 1388 aaKnown RBP11.15□□□□□ -0.63
MACF1-220ENST00000485063 AHDC1Q5TGY3 1603 aaPredicted RBP11.14□□□□□ -0.63
MACF1-220ENST00000485063 ESCO1Q5FWF5 840 aa11.14□□□□□ -0.63
MACF1-220ENST00000485063 PIP4P2Q8N4L2 257 aa11.14□□□□□ -0.63
MACF1-220ENST00000485063 EIF3AQ14152 1382 aaKnown RBP11.14□□□□□ -0.63
MACF1-220ENST00000485063 NHSL1Q5SYE7 1610 aa11.13□□□□□ -0.63
MACF1-220ENST00000485063 MINK1Q8N4C8 1332 aaPredicted RBP11.13□□□□□ -0.63
MACF1-220ENST00000485063 ADGRB2O60241 1585 aa11.13□□□□□ -0.63
MACF1-220ENST00000485063 NUTM2FA1L443 756 aa11.13□□□□□ -0.63
MACF1-220ENST00000485063 TIMELESSQ9UNS1 1208 aa11.13□□□□□ -0.63
MACF1-220ENST00000485063 ORAI2Q96SN7 254 aa11.12□□□□□ -0.63
MACF1-220ENST00000485063 RGPD8O14715 1765 aaPredicted RBP11.12□□□□□ -0.63
MACF1-220ENST00000485063 COL16A1Q07092 1604 aaPredicted RBP11.12□□□□□ -0.63
MACF1-220ENST00000485063 KIF1AQ12756 1690 aa11.11□□□□□ -0.63
MACF1-220ENST00000485063 LRRC59Q96AG4 307 aaKnown RBP11.11□□□□□ -0.63
MACF1-220ENST00000485063 HIRIP3Q9BW71 556 aaPredicted RBP11.11□□□□□ -0.63
MACF1-220ENST00000485063 JCADQ9P266 1359 aa11.11□□□□□ -0.63
MACF1-220ENST00000485063 QRICH2Q9H0J4 1663 aa11.11□□□□□ -0.63
MACF1-220ENST00000485063 NPHP3Q7Z494 1330 aa11.1□□□□□ -0.63
MACF1-220ENST00000485063 CENPJQ9HC77 1338 aaPredicted RBP11.1□□□□□ -0.63
MACF1-220ENST00000485063 WASLO00401 505 aaPredicted RBP11.1□□□□□ -0.63
MACF1-220ENST00000485063 NBPF8Q3BBV2 869 aa11.1□□□□□ -0.63
MACF1-220ENST00000485063 CARD11Q9BXL7 1154 aa11.1□□□□□ -0.63
MACF1-220ENST00000485063 ANKARQ7Z5J8 1434 aa11.09□□□□□ -0.63
MACF1-220ENST00000485063 ITSN1Q15811 1721 aa11.09□□□□□ -0.63
MACF1-220ENST00000485063 SHPRHQ149N8 1683 aa11.09□□□□□ -0.63
MACF1-220ENST00000485063 TULP4Q9NRJ4 1543 aa11.09□□□□□ -0.63
MACF1-220ENST00000485063 RALGAPBQ86X10 1494 aa11.08□□□□□ -0.64
MACF1-220ENST00000485063 DISP3Q9P2K9 1392 aa11.08□□□□□ -0.64
MACF1-220ENST00000485063 SPDYE2BA6NHP3 402 aa11.08□□□□□ -0.64
MACF1-220ENST00000485063 PITPNM1O00562 1244 aa11.08□□□□□ -0.64
MACF1-220ENST00000485063 SPDYE6P0CI01 402 aa11.08□□□□□ -0.64
MACF1-220ENST00000485063 SPDYE2Q495Y8 402 aa11.08□□□□□ -0.64
MACF1-220ENST00000485063 PHF8Q9UPP1 1060 aa11.08□□□□□ -0.64
MACF1-220ENST00000485063 SPATA31A6Q5VVP1 1343 aa11.08□□□□□ -0.64
MACF1-220ENST00000485063 MED1Q15648 1581 aaPredicted RBP11.07□□□□□ -0.64
MACF1-220ENST00000485063 FOXO3O43524 673 aa11.07□□□□□ -0.64
MACF1-220ENST00000485063 DDX17Q92841 729 aaKnown RBP11.07□□□□□ -0.64
MACF1-220ENST00000485063 CDK19Q9BWU1 502 aa11.07□□□□□ -0.64
MACF1-220ENST00000485063 USP32Q8NFA0 1604 aa11.06□□□□□ -0.64
MACF1-220ENST00000485063 GPRASP1Q5JY77 1395 aa11.06□□□□□ -0.64
MACF1-220ENST00000485063 FXR2P51116 673 aaKnown RBP eCLIP11.06□□□□□ -0.644e-9■■□□□ 13.2
MACF1-220ENST00000485063 SRPK2P78362 688 aaKnown RBP11.06□□□□□ -0.64
MACF1-220ENST00000485063 PSME1Q06323 249 aa11.06□□□□□ -0.64
MACF1-220ENST00000485063 SOS2Q07890 1332 aaPredicted RBP11.06□□□□□ -0.64
MACF1-220ENST00000485063 MEX3CQ5U5Q3 659 aaKnown RBP11.05□□□□□ -0.64
MACF1-220ENST00000485063 EVC2Q86UK5 1308 aa11.05□□□□□ -0.64
MACF1-220ENST00000485063 SLC24A1O60721 1099 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms