RNA–Protein interactions for RNA: ENST00000484867.1

RC3H1-205, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-205ENST00000484867 WNT7AO00755 349 aa11.08□□□□□ -0.64
RC3H1-205ENST00000484867 GRIPAP1Q4V328 841 aa11.07□□□□□ -0.64
RC3H1-205ENST00000484867 GMPR2Q9P2T1 348 aaKnown RBP11.07□□□□□ -0.64
RC3H1-205ENST00000484867 AXIN1O15169 862 aa11.06□□□□□ -0.64
RC3H1-205ENST00000484867 SMPD1P17405 629 aa11.06□□□□□ -0.64
RC3H1-205ENST00000484867 Q3C1V9 767 aa11.06□□□□□ -0.64
RC3H1-205ENST00000484867 DXOO77932 396 aaKnown RBP11.05□□□□□ -0.64
RC3H1-205ENST00000484867 TRIM32Q13049 653 aa11.05□□□□□ -0.64
RC3H1-205ENST00000484867 MAP2K5Q13163 448 aa11.04□□□□□ -0.64
RC3H1-205ENST00000484867 KDM2AQ9Y2K7 1162 aa11.04□□□□□ -0.64
RC3H1-205ENST00000484867 ZBTB24O43167 697 aaPredicted RBP11.03□□□□□ -0.64
RC3H1-205ENST00000484867 IRF6O14896 467 aa11.02□□□□□ -0.65
RC3H1-205ENST00000484867 KDM4AO75164 1064 aa11.02□□□□□ -0.65
RC3H1-205ENST00000484867 SNIP1Q8TAD8 396 aaKnown RBP11.02□□□□□ -0.65
RC3H1-205ENST00000484867 USB1Q9BQ65 265 aaKnown RBP11.02□□□□□ -0.65
RC3H1-205ENST00000484867 TTC24A2A3L6 582 aaPredicted RBP11.01□□□□□ -0.65
RC3H1-205ENST00000484867 HLA-CQ95604 372 aa11.01□□□□□ -0.65
RC3H1-205ENST00000484867 C11orf95C9JLR9 678 aaPredicted RBP11□□□□□ -0.65
RC3H1-205ENST00000484867 MRGPRX2Q96LB1 330 aa11□□□□□ -0.65
RC3H1-205ENST00000484867 USP46P62068 366 aa10.99□□□□□ -0.65
RC3H1-205ENST00000484867 NFX1Q12986 1120 aaKnown RBP10.99□□□□□ -0.65
RC3H1-205ENST00000484867 J3QL48 77 aa10.98□□□□□ -0.65
RC3H1-205ENST00000484867 HOXA2O43364 376 aa10.97□□□□□ -0.65
RC3H1-205ENST00000484867 SKOR1P84550 965 aa10.97□□□□□ -0.65
RC3H1-205ENST00000484867 MDM2Q00987 491 aaPredicted RBP10.97□□□□□ -0.65
RC3H1-205ENST00000484867 MINK1Q8N4C8 1332 aaPredicted RBP10.96□□□□□ -0.65
RC3H1-205ENST00000484867 WFS1O76024 890 aa10.96□□□□□ -0.65
RC3H1-205ENST00000484867 LCE2CQ5TA81 110 aa10.96□□□□□ -0.65
RC3H1-205ENST00000484867 ATP13A2Q9NQ11 1180 aa10.96□□□□□ -0.65
RC3H1-205ENST00000484867 SNRPBP14678 240 aaKnown RBP10.93□□□□□ -0.66
RC3H1-205ENST00000484867 RC3H1Q5TC82 1133 aaKnown RBP10.93□□□□□ -0.66
RC3H1-205ENST00000484867 HPS1Q92902 700 aa10.93□□□□□ -0.66
RC3H1-205ENST00000484867 WIPF1O43516 503 aa10.92□□□□□ -0.66
RC3H1-205ENST00000484867 WNT7BP56706 349 aa10.92□□□□□ -0.66
RC3H1-205ENST00000484867 REPIN1Q9BWE0 567 aaKnown RBP10.92□□□□□ -0.66
RC3H1-205ENST00000484867 GUCA2AQ02747 115 aa10.91□□□□□ -0.66
RC3H1-205ENST00000484867 CCDC102AQ96A19 550 aa10.91□□□□□ -0.66
RC3H1-205ENST00000484867 TRIM47Q96LD4 638 aa10.91□□□□□ -0.66
RC3H1-205ENST00000484867 FAM217BQ9NTX9 383 aaPredicted RBP10.91□□□□□ -0.66
RC3H1-205ENST00000484867 JUNDP17535 347 aa10.89□□□□□ -0.67
RC3H1-205ENST00000484867 SYMPKQ92797 1274 aaKnown RBP10.89□□□□□ -0.67
RC3H1-205ENST00000484867 SIAH2O43255 324 aa10.88□□□□□ -0.67
RC3H1-205ENST00000484867 HAP1P54257 671 aaPredicted RBP10.88□□□□□ -0.67
RC3H1-205ENST00000484867 CCDC24Q8N4L8 307 aa10.88□□□□□ -0.67
RC3H1-205ENST00000484867 GPCPD1Q9NPB8 672 aa10.88□□□□□ -0.67
RC3H1-205ENST00000484867 PTCRAQ6ISU1 281 aaPredicted RBP10.87□□□□□ -0.67
RC3H1-205ENST00000484867 SENP2Q9HC62 589 aa10.86□□□□□ -0.67
RC3H1-205ENST00000484867 PCDHGC3Q9UN70 934 aa10.86□□□□□ -0.67
RC3H1-205ENST00000484867 CLCN1P35523 988 aa10.85□□□□□ -0.67
RC3H1-205ENST00000484867 RETREG3Q86VR2 466 aa10.85□□□□□ -0.67
RC3H1-205ENST00000484867 TERTO14746 1132 aaKnown RBP10.84□□□□□ -0.67
RC3H1-205ENST00000484867 KIFC2Q96AC6 838 aa10.81□□□□□ -0.68
RC3H1-205ENST00000484867 NUDT12Q9BQG2 462 aa10.81□□□□□ -0.68
RC3H1-205ENST00000484867 STK17AQ9UEE5 414 aa10.81□□□□□ -0.68
RC3H1-205ENST00000484867 ALDH1A1P00352 501 aa10.8□□□□□ -0.68
RC3H1-205ENST00000484867 FDX1P10109 184 aa10.79□□□□□ -0.68
RC3H1-205ENST00000484867 TULP1O00294 542 aaPredicted RBP10.78□□□□□ -0.68
RC3H1-205ENST00000484867 SH3BP2P78314 561 aa10.78□□□□□ -0.68
RC3H1-205ENST00000484867 NUTM1Q86Y26 1132 aa10.78□□□□□ -0.68
RC3H1-205ENST00000484867 INSM1Q01101 510 aaPredicted RBP10.77□□□□□ -0.69
RC3H1-205ENST00000484867 TRIM46Q7Z4K8 759 aa10.77□□□□□ -0.69
RC3H1-205ENST00000484867 VSIG10Q8N0Z9 540 aa10.77□□□□□ -0.69
RC3H1-205ENST00000484867 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.76□□□□□ -0.69
RC3H1-205ENST00000484867 SPIRE2Q8WWL2 714 aa10.76□□□□□ -0.69
RC3H1-205ENST00000484867 CCNYL3P0C7X3 344 aa10.75□□□□□ -0.69
RC3H1-205ENST00000484867 MS4A1P11836 297 aa10.75□□□□□ -0.69
RC3H1-205ENST00000484867 EHBP1Q8NDI1 1231 aa10.75□□□□□ -0.69
RC3H1-205ENST00000484867 EVA1BQ9NVM1 165 aa10.75□□□□□ -0.69
RC3H1-205ENST00000484867 SSTR3P32745 418 aaPredicted RBP10.74□□□□□ -0.69
RC3H1-205ENST00000484867 PTPRNQ16849 979 aa10.74□□□□□ -0.69
RC3H1-205ENST00000484867 MOXD2PA6NHM9 499 aa10.72□□□□□ -0.69
RC3H1-205ENST00000484867 C6orf229H3BNL8 230 aa10.72□□□□□ -0.69
RC3H1-205ENST00000484867 NDUFV2P19404 249 aa10.72□□□□□ -0.69
RC3H1-205ENST00000484867 CAPN5O15484 640 aaPredicted RBP10.71□□□□□ -0.69
RC3H1-205ENST00000484867 BMP1P13497 986 aa10.71□□□□□ -0.69
RC3H1-205ENST00000484867 LORP23490 312 aaPredicted RBP10.71□□□□□ -0.69
RC3H1-205ENST00000484867 UNC93B1Q9H1C4 597 aa10.71□□□□□ -0.69
RC3H1-205ENST00000484867 DESI1Q6ICB0 168 aa10.7□□□□□ -0.7
RC3H1-205ENST00000484867 MPNDQ8N594 471 aa10.7□□□□□ -0.7
RC3H1-205ENST00000484867 NXF1Q9UBU9 619 aaKnown RBP10.7□□□□□ -0.7
RC3H1-205ENST00000484867 KCNH2Q12809 1159 aa10.69□□□□□ -0.7
RC3H1-205ENST00000484867 AMHR2Q16671 573 aa10.69□□□□□ -0.7
RC3H1-205ENST00000484867 BARGINQ6ZT62 677 aa10.69□□□□□ -0.7
RC3H1-205ENST00000484867 KRI1Q8N9T8 703 aaKnown RBP10.69□□□□□ -0.7
RC3H1-205ENST00000484867 NPAS3Q8IXF0 933 aa10.68□□□□□ -0.7
RC3H1-205ENST00000484867 PRR7Q8TB68 274 aa10.68□□□□□ -0.7
RC3H1-205ENST00000484867 BAP1Q92560 729 aa10.68□□□□□ -0.7
RC3H1-205ENST00000484867 WASF2Q9Y6W5 498 aa10.68□□□□□ -0.7
RC3H1-205ENST00000484867 ZMYND10O75800 440 aa10.66□□□□□ -0.7
RC3H1-205ENST00000484867 ZNF511Q8NB15 262 aa10.66□□□□□ -0.7
RC3H1-205ENST00000484867 TLL2Q9Y6L7 1015 aa10.66□□□□□ -0.7
RC3H1-205ENST00000484867 SPDYE5A6NIY4 337 aa10.65□□□□□ -0.7
RC3H1-205ENST00000484867 GJA5P36382 358 aa10.65□□□□□ -0.7
RC3H1-205ENST00000484867 LINC01559Q495D7 138 aa10.65□□□□□ -0.7
RC3H1-205ENST00000484867 KLF16Q9BXK1 252 aaPredicted RBP10.65□□□□□ -0.7
RC3H1-205ENST00000484867 H3BM21 787 aa10.64□□□□□ -0.71
RC3H1-205ENST00000484867 VARSP26640 1264 aaKnown RBP10.64□□□□□ -0.71
RC3H1-205ENST00000484867 GMPRP36959 345 aa10.64□□□□□ -0.71
RC3H1-205ENST00000484867 MTMR2Q13614 643 aa10.64□□□□□ -0.71
RC3H1-205ENST00000484867 GIGYF2Q6Y7W6 1299 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms