RNA–Protein interactions for RNA: ENST00000484476.5

LDLRAP1-205, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 1 (best)

Gene LDLRAP1, Length 657 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-205ENST00000484476 ORAI2Q96SN7 254 aa20.24■□□□□ 0.83
LDLRAP1-205ENST00000484476 SETD1AO15047 1707 aaKnown RBP20.22■□□□□ 0.83
LDLRAP1-205ENST00000484476 TECPR2O15040 1411 aa20.22■□□□□ 0.83
LDLRAP1-205ENST00000484476 ZNF772Q68DY9 489 aaPredicted RBP20.22■□□□□ 0.83
LDLRAP1-205ENST00000484476 COL16A1Q07092 1604 aaPredicted RBP20.21■□□□□ 0.83
LDLRAP1-205ENST00000484476 DDX17Q92841 729 aaKnown RBP20.21■□□□□ 0.83
LDLRAP1-205ENST00000484476 NPHP3Q7Z494 1330 aa20.21■□□□□ 0.83
LDLRAP1-205ENST00000484476 NALCNQ8IZF0 1738 aa20.2■□□□□ 0.82
LDLRAP1-205ENST00000484476 IFT172Q9UG01 1749 aa20.2■□□□□ 0.82
LDLRAP1-205ENST00000484476 NUTM2FA1L443 756 aa20.2■□□□□ 0.82
LDLRAP1-205ENST00000484476 PRAM1Q96QH2 718 aa20.2■□□□□ 0.82
LDLRAP1-205ENST00000484476 NRXN1Q9ULB1 1477 aa20.19■□□□□ 0.82
LDLRAP1-205ENST00000484476 SAFB2Q14151 953 aaKnown RBP eCLIP20.19■□□□□ 0.82
LDLRAP1-205ENST00000484476 RGS17Q9UGC6 210 aaPredicted RBP20.19■□□□□ 0.82
LDLRAP1-205ENST00000484476 TRAK1Q9UPV9 953 aa20.18■□□□□ 0.82
LDLRAP1-205ENST00000484476 LAMC1P11047 1609 aa20.16■□□□□ 0.82
LDLRAP1-205ENST00000484476 FOXO3O43524 673 aa20.16■□□□□ 0.82
LDLRAP1-205ENST00000484476 PLEKHH1Q9ULM0 1364 aa20.16■□□□□ 0.82
LDLRAP1-205ENST00000484476 SOS2Q07890 1332 aaPredicted RBP20.15■□□□□ 0.82
LDLRAP1-205ENST00000484476 CDC42BPGQ6DT37 1551 aa20.14■□□□□ 0.81
LDLRAP1-205ENST00000484476 POTEAQ6S8J7 498 aa20.14■□□□□ 0.81
LDLRAP1-205ENST00000484476 PSME1Q06323 249 aa20.13■□□□□ 0.81
LDLRAP1-205ENST00000484476 NGLY1Q96IV0 654 aa20.12■□□□□ 0.81
LDLRAP1-205ENST00000484476 C8orf37Q96NL8 207 aa20.12■□□□□ 0.81
LDLRAP1-205ENST00000484476 SHPRHQ149N8 1683 aa20.12■□□□□ 0.81
LDLRAP1-205ENST00000484476 ADAMTS2O95450 1211 aa20.11■□□□□ 0.81
LDLRAP1-205ENST00000484476 NHSL1Q5SYE7 1610 aa20.11■□□□□ 0.81
LDLRAP1-205ENST00000484476 PNPLA6Q8IY17 1366 aa20.1■□□□□ 0.81
LDLRAP1-205ENST00000484476 PHF8Q9UPP1 1060 aa20.1■□□□□ 0.81
LDLRAP1-205ENST00000484476 KNDC1Q76NI1 1749 aa20.1■□□□□ 0.81
LDLRAP1-205ENST00000484476 EIF3AQ14152 1382 aaKnown RBP20.09■□□□□ 0.81
LDLRAP1-205ENST00000484476 XPCQ01831 940 aaPredicted RBP20.09■□□□□ 0.81
LDLRAP1-205ENST00000484476 RXRBP28702 533 aa20.08■□□□□ 0.81
LDLRAP1-205ENST00000484476 KRT28Q7Z3Y7 464 aa20.08■□□□□ 0.81
LDLRAP1-205ENST00000484476 AFF2P51816 1311 aa20.07■□□□□ 0.8
LDLRAP1-205ENST00000484476 MINK1Q8N4C8 1332 aaPredicted RBP20.07■□□□□ 0.8
LDLRAP1-205ENST00000484476 LRP6O75581 1613 aa20.07■□□□□ 0.8
LDLRAP1-205ENST00000484476 HAP1P54257 671 aaPredicted RBP20.07■□□□□ 0.8
LDLRAP1-205ENST00000484476 NEUROD1Q13562 356 aa20.07■□□□□ 0.8
LDLRAP1-205ENST00000484476 HIRIP3Q9BW71 556 aaPredicted RBP20.07■□□□□ 0.8
LDLRAP1-205ENST00000484476 DLC1Q96QB1 1528 aa20.07■□□□□ 0.8
LDLRAP1-205ENST00000484476 TRIM26Q12899 539 aaPredicted RBP20.05■□□□□ 0.8
LDLRAP1-205ENST00000484476 LMOD2Q6P5Q4 547 aa20.05■□□□□ 0.8
LDLRAP1-205ENST00000484476 WASLO00401 505 aaPredicted RBP20.04■□□□□ 0.8
LDLRAP1-205ENST00000484476 QTRT2Q9H974 415 aaKnown RBP20.04■□□□□ 0.8
LDLRAP1-205ENST00000484476 ADGRB1O14514 1584 aa20.02■□□□□ 0.8
LDLRAP1-205ENST00000484476 NGDNQ8NEJ9 315 aaKnown RBP20.01■□□□□ 0.79
LDLRAP1-205ENST00000484476 PMFBP1Q8TBY8 1022 aa20.01■□□□□ 0.79
LDLRAP1-205ENST00000484476 L3MBTL2Q969R5 705 aa20.01■□□□□ 0.79
LDLRAP1-205ENST00000484476 USP21Q9UK80 565 aa20.01■□□□□ 0.79
LDLRAP1-205ENST00000484476 ANKARQ7Z5J8 1434 aa20.01■□□□□ 0.79
LDLRAP1-205ENST00000484476 GPRASP1Q5JY77 1395 aa20■□□□□ 0.79
LDLRAP1-205ENST00000484476 SIN3AQ96ST3 1273 aa20■□□□□ 0.79
LDLRAP1-205ENST00000484476 SPATA31A3Q5VYP0 1347 aa20■□□□□ 0.79
LDLRAP1-205ENST00000484476 RBM6P78332 1123 aaKnown RBP19.99■□□□□ 0.79
LDLRAP1-205ENST00000484476 FMN2Q9NZ56 1722 aa19.99■□□□□ 0.79
LDLRAP1-205ENST00000484476 PXDNQ92626 1479 aa19.98■□□□□ 0.79
LDLRAP1-205ENST00000484476 KIF1AQ12756 1690 aa19.97■□□□□ 0.79
LDLRAP1-205ENST00000484476 TRPC5Q9UL62 973 aaPredicted RBP19.97■□□□□ 0.79
LDLRAP1-205ENST00000484476 PLEKHG5O94827 1062 aa19.96■□□□□ 0.79
LDLRAP1-205ENST00000484476 NBPF1Q3BBV0 1214 aa19.96■□□□□ 0.79
LDLRAP1-205ENST00000484476 ARHGEF10O15013 1369 aa19.95■□□□□ 0.79
LDLRAP1-205ENST00000484476 FNBP4Q8N3X1 1017 aaPredicted RBP19.95■□□□□ 0.78
LDLRAP1-205ENST00000484476 NUDT16Q96DE0 195 aaKnown RBP19.95■□□□□ 0.78
LDLRAP1-205ENST00000484476 CDK19Q9BWU1 502 aa19.95■□□□□ 0.78
LDLRAP1-205ENST00000484476 SBNO1A3KN83 1393 aa19.95■□□□□ 0.78
LDLRAP1-205ENST00000484476 PAK3O75914 559 aaPredicted RBP19.94■□□□□ 0.78
LDLRAP1-205ENST00000484476 CENPJQ9HC77 1338 aaPredicted RBP19.93■□□□□ 0.78
LDLRAP1-205ENST00000484476 SRPK2P78362 688 aaKnown RBP19.92■□□□□ 0.78
LDLRAP1-205ENST00000484476 CCDC61Q9Y6R9 512 aa19.92■□□□□ 0.78
LDLRAP1-205ENST00000484476 TNS3Q68CZ2 1445 aa19.92■□□□□ 0.78
LDLRAP1-205ENST00000484476 ADGRB2O60241 1585 aa19.91■□□□□ 0.78
LDLRAP1-205ENST00000484476 TULP4Q9NRJ4 1543 aa19.9■□□□□ 0.78
LDLRAP1-205ENST00000484476 KIAA1210Q9ULL0 1709 aa19.9■□□□□ 0.78
LDLRAP1-205ENST00000484476 COL22A1Q8NFW1 1626 aaPredicted RBP19.89■□□□□ 0.77
LDLRAP1-205ENST00000484476 ROCK2O75116 1388 aaKnown RBP19.88■□□□□ 0.77
LDLRAP1-205ENST00000484476 TONSLQ96HA7 1378 aa19.88■□□□□ 0.77
LDLRAP1-205ENST00000484476 PRR36Q9H6K5 1346 aa19.88■□□□□ 0.77
LDLRAP1-205ENST00000484476 CABLES1Q8TDN4 633 aa19.88■□□□□ 0.77
LDLRAP1-205ENST00000484476 CDK12Q9NYV4 1490 aaPredicted RBP19.87■□□□□ 0.77
LDLRAP1-205ENST00000484476 UNC5CLQ8IV45 518 aa19.86■□□□□ 0.77
LDLRAP1-205ENST00000484476 CCDC9Q9Y3X0 531 aaKnown RBP19.85■□□□□ 0.77
LDLRAP1-205ENST00000484476 RGPD8O14715 1765 aaPredicted RBP19.85■□□□□ 0.77
LDLRAP1-205ENST00000484476 EVC2Q86UK5 1308 aa19.84■□□□□ 0.77
LDLRAP1-205ENST00000484476 NBPF8Q3BBV2 869 aa19.83■□□□□ 0.77
LDLRAP1-205ENST00000484476 GJD4Q96KN9 370 aaPredicted RBP19.83■□□□□ 0.77
LDLRAP1-205ENST00000484476 ARHGEF28Q8N1W1 1705 aaKnown RBP19.82■□□□□ 0.76
LDLRAP1-205ENST00000484476 ACEP12821 1306 aa19.82■□□□□ 0.76
LDLRAP1-205ENST00000484476 PLEKHG3A1L390 1219 aa19.82■□□□□ 0.76
LDLRAP1-205ENST00000484476 CABP2Q9NPB3 220 aa19.82■□□□□ 0.76
LDLRAP1-205ENST00000484476 USP32Q8NFA0 1604 aa19.8■□□□□ 0.76
LDLRAP1-205ENST00000484476 CARD11Q9BXL7 1154 aa19.8■□□□□ 0.76
LDLRAP1-205ENST00000484476 ATRNO75882 1429 aa19.79■□□□□ 0.76
LDLRAP1-205ENST00000484476 ABTB2Q8N961 1025 aa19.79■□□□□ 0.76
LDLRAP1-205ENST00000484476 UPF1Q92900 1129 aaKnown RBP eCLIP19.79■□□□□ 0.76
LDLRAP1-205ENST00000484476 ATP7BP35670 1465 aa19.79■□□□□ 0.76
LDLRAP1-205ENST00000484476 BCL9LQ86UU0 1499 aa19.79■□□□□ 0.76
LDLRAP1-205ENST00000484476 FAM83GA6ND36 823 aa19.77■□□□□ 0.76
LDLRAP1-205ENST00000484476 PRDM11Q9NQV5 511 aa19.77■□□□□ 0.76
LDLRAP1-205ENST00000484476 ITSN1Q15811 1721 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms