RNA–Protein interactions for RNA: ENST00000484468.1

LPP-216, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 3

Gene LPP, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-216ENST00000484468 KNDC1Q76NI1 1749 aa11.2□□□□□ -0.62
LPP-216ENST00000484468 CDC42BPGQ6DT37 1551 aa11.2□□□□□ -0.62
LPP-216ENST00000484468 MYOM2P54296 1465 aa11.19□□□□□ -0.62
LPP-216ENST00000484468 NRXN1Q9ULB1 1477 aa11.19□□□□□ -0.62
LPP-216ENST00000484468 SPATA31A6Q5VVP1 1343 aa11.19□□□□□ -0.62
LPP-216ENST00000484468 YTHDC2Q9H6S0 1430 aaKnown RBP11.18□□□□□ -0.62
LPP-216ENST00000484468 ACIN1Q9UKV3 1341 aaKnown RBP11.18□□□□□ -0.62
LPP-216ENST00000484468 NUTM2BA6NNL0 878 aaPredicted RBP11.18□□□□□ -0.62
LPP-216ENST00000484468 NUTM2EB1AL46 878 aaPredicted RBP11.18□□□□□ -0.62
LPP-216ENST00000484468 MEX3CQ5U5Q3 659 aaKnown RBP11.18□□□□□ -0.62
LPP-216ENST00000484468 WAPLQ7Z5K2 1190 aa11.18□□□□□ -0.62
LPP-216ENST00000484468 NUTM2AQ8IVF1 878 aaPredicted RBP11.18□□□□□ -0.62
LPP-216ENST00000484468 ORAI2Q96SN7 254 aa11.18□□□□□ -0.62
LPP-216ENST00000484468 PNPLA6Q8IY17 1366 aa11.17□□□□□ -0.62
LPP-216ENST00000484468 LAMC1P11047 1609 aa11.17□□□□□ -0.62
LPP-216ENST00000484468 ABCC11Q96J66 1382 aa11.16□□□□□ -0.62
LPP-216ENST00000484468 CFAP70Q5T0N1 1121 aa11.16□□□□□ -0.62
LPP-216ENST00000484468 NUTM2FA1L443 756 aa11.15□□□□□ -0.62
LPP-216ENST00000484468 C14orf93Q9H972 538 aaKnown RBP11.15□□□□□ -0.62
LPP-216ENST00000484468 RNF216Q9NWF9 866 aaPredicted RBP11.15□□□□□ -0.62
LPP-216ENST00000484468 LRRC59Q96AG4 307 aaKnown RBP11.14□□□□□ -0.63
LPP-216ENST00000484468 FMN2Q9NZ56 1722 aa11.14□□□□□ -0.63
LPP-216ENST00000484468 SOS2Q07890 1332 aaPredicted RBP11.13□□□□□ -0.63
LPP-216ENST00000484468 ADGRB1O14514 1584 aa11.13□□□□□ -0.63
LPP-216ENST00000484468 SAFB2Q14151 953 aaKnown RBP eCLIP11.13□□□□□ -0.63
LPP-216ENST00000484468 ESCO1Q5FWF5 840 aa11.13□□□□□ -0.63
LPP-216ENST00000484468 PXDNQ92626 1479 aa11.12□□□□□ -0.63
LPP-216ENST00000484468 XPCQ01831 940 aaPredicted RBP11.12□□□□□ -0.63
LPP-216ENST00000484468 KDM2AQ9Y2K7 1162 aa11.12□□□□□ -0.63
LPP-216ENST00000484468 DHX57Q6P158 1386 aaKnown RBP11.12□□□□□ -0.63
LPP-216ENST00000484468 AFF2P51816 1311 aa11.11□□□□□ -0.63
LPP-216ENST00000484468 HRCP23327 699 aa11.11□□□□□ -0.63
LPP-216ENST00000484468 DCAF11Q8TEB1 546 aa11.11□□□□□ -0.63
LPP-216ENST00000484468 C8orf37Q96NL8 207 aa11.11□□□□□ -0.63
LPP-216ENST00000484468 PRAM1Q96QH2 718 aa11.11□□□□□ -0.63
LPP-216ENST00000484468 DLC1Q96QB1 1528 aa11.1□□□□□ -0.63
LPP-216ENST00000484468 ADAMTS2O95450 1211 aa11.1□□□□□ -0.63
LPP-216ENST00000484468 ZNF772Q68DY9 489 aaPredicted RBP11.1□□□□□ -0.63
LPP-216ENST00000484468 NPHP3Q7Z494 1330 aa11.09□□□□□ -0.63
LPP-216ENST00000484468 COL22A1Q8NFW1 1626 aaPredicted RBP11.09□□□□□ -0.63
LPP-216ENST00000484468 FOXO3O43524 673 aa11.09□□□□□ -0.63
LPP-216ENST00000484468 KIF1AQ12756 1690 aa11.08□□□□□ -0.64
LPP-216ENST00000484468 SIRT1Q96EB6 747 aa11.08□□□□□ -0.64
LPP-216ENST00000484468 TRAK1Q9UPV9 953 aa11.08□□□□□ -0.64
LPP-216ENST00000484468 ADGRB2O60241 1585 aa11.07□□□□□ -0.64
LPP-216ENST00000484468 USP32Q8NFA0 1604 aa11.07□□□□□ -0.64
LPP-216ENST00000484468 HIRIP3Q9BW71 556 aaPredicted RBP11.07□□□□□ -0.64
LPP-216ENST00000484468 POGKQ9P215 609 aa11.07□□□□□ -0.64
LPP-216ENST00000484468 RGPD8O14715 1765 aaPredicted RBP11.07□□□□□ -0.64
LPP-216ENST00000484468 MINK1Q8N4C8 1332 aaPredicted RBP11.06□□□□□ -0.64
LPP-216ENST00000484468 RGS12O14924 1447 aa11.05□□□□□ -0.64
LPP-216ENST00000484468 ARHGEF28Q8N1W1 1705 aaKnown RBP11.05□□□□□ -0.64
LPP-216ENST00000484468 RXRBP28702 533 aa11.04□□□□□ -0.64
LPP-216ENST00000484468 CACNB1Q02641 598 aaPredicted RBP11.04□□□□□ -0.64
LPP-216ENST00000484468 NCBP3Q53F19 620 aaKnown RBP11.04□□□□□ -0.64
LPP-216ENST00000484468 NGLY1Q96IV0 654 aa11.04□□□□□ -0.64
LPP-216ENST00000484468 PHF8Q9UPP1 1060 aa11.04□□□□□ -0.64
LPP-216ENST00000484468 TNS3Q68CZ2 1445 aa11.03□□□□□ -0.64
LPP-216ENST00000484468 ANKARQ7Z5J8 1434 aa11.03□□□□□ -0.64
LPP-216ENST00000484468 QTRT2Q9H974 415 aaKnown RBP11.03□□□□□ -0.64
LPP-216ENST00000484468 CDK12Q9NYV4 1490 aaPredicted RBP11.03□□□□□ -0.64
LPP-216ENST00000484468 TULP4Q9NRJ4 1543 aa11.03□□□□□ -0.64
LPP-216ENST00000484468 SPATA31A3Q5VYP0 1347 aa11.03□□□□□ -0.64
LPP-216ENST00000484468 PRR36Q9H6K5 1346 aa11.03□□□□□ -0.64
LPP-216ENST00000484468 PLEKHG5O94827 1062 aa11.02□□□□□ -0.65
LPP-216ENST00000484468 KRT28Q7Z3Y7 464 aa11.02□□□□□ -0.65
LPP-216ENST00000484468 PMFBP1Q8TBY8 1022 aa11.02□□□□□ -0.65
LPP-216ENST00000484468 MARF1Q9Y4F3 1742 aaKnown RBP11.01□□□□□ -0.65
LPP-216ENST00000484468 USP21Q9UK80 565 aa11.01□□□□□ -0.65
LPP-216ENST00000484468 ABCA3Q99758 1704 aa11.01□□□□□ -0.65
LPP-216ENST00000484468 ATRNO75882 1429 aa11.01□□□□□ -0.65
LPP-216ENST00000484468 RBM6P78332 1123 aaKnown RBP11□□□□□ -0.65
LPP-216ENST00000484468 STAC3Q96MF2 364 aa11□□□□□ -0.65
LPP-216ENST00000484468 TRPM3Q9HCF6 1732 aaPredicted RBP11□□□□□ -0.65
LPP-216ENST00000484468 KIAA1210Q9ULL0 1709 aa11□□□□□ -0.65
LPP-216ENST00000484468 ATP7BP35670 1465 aa11□□□□□ -0.65
LPP-216ENST00000484468 BCL9LQ86UU0 1499 aa11□□□□□ -0.65
LPP-216ENST00000484468 WASLO00401 505 aaPredicted RBP10.99□□□□□ -0.65
LPP-216ENST00000484468 NBPF1Q3BBV0 1214 aa10.99□□□□□ -0.65
LPP-216ENST00000484468 LMOD2Q6P5Q4 547 aa10.99□□□□□ -0.65
LPP-216ENST00000484468 FNBP4Q8N3X1 1017 aaPredicted RBP10.99□□□□□ -0.65
LPP-216ENST00000484468 CABLES1Q8TDN4 633 aa10.99□□□□□ -0.65
LPP-216ENST00000484468 SIN3AQ96ST3 1273 aa10.99□□□□□ -0.65
LPP-216ENST00000484468 SBNO1A3KN83 1393 aa10.99□□□□□ -0.65
LPP-216ENST00000484468 EIF3AQ14152 1382 aaKnown RBP10.99□□□□□ -0.65
LPP-216ENST00000484468 EP400Q96L91 3159 aa10.99□□□□□ -0.65
LPP-216ENST00000484468 PSME1Q06323 249 aa10.98□□□□□ -0.65
LPP-216ENST00000484468 UPF1Q92900 1129 aaKnown RBP eCLIP10.98□□□□□ -0.65
LPP-216ENST00000484468 TRPC5Q9UL62 973 aaPredicted RBP10.98□□□□□ -0.65
LPP-216ENST00000484468 ARHGEF10O15013 1369 aa10.97□□□□□ -0.65
LPP-216ENST00000484468 SLIT2O94813 1529 aa10.97□□□□□ -0.65
LPP-216ENST00000484468 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.96□□□□□ -0.65
LPP-216ENST00000484468 ALS2Q96Q42 1657 aa10.96□□□□□ -0.65
LPP-216ENST00000484468 HAP1P54257 671 aaPredicted RBP10.96□□□□□ -0.65
LPP-216ENST00000484468 L3MBTL2Q969R5 705 aa10.96□□□□□ -0.65
LPP-216ENST00000484468 ITSN1Q15811 1721 aa10.95□□□□□ -0.66
LPP-216ENST00000484468 PLCH1Q4KWH8 1693 aa10.95□□□□□ -0.66
LPP-216ENST00000484468 TOPAZ1Q8N9V7 1692 aa10.95□□□□□ -0.66
LPP-216ENST00000484468 GPRASP1Q5JY77 1395 aa10.95□□□□□ -0.66
LPP-216ENST00000484468 NEUROD1Q13562 356 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms