RNA–Protein interactions for RNA: ENST00000484412.1

HDLBP-240, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-240ENST00000484412 PRAM1Q96QH2 718 aa20■□□□□ 0.79
HDLBP-240ENST00000484412 PLEKHH1Q9ULM0 1364 aa19.99■□□□□ 0.79
HDLBP-240ENST00000484412 POGKQ9P215 609 aa19.98■□□□□ 0.79
HDLBP-240ENST00000484412 NALCNQ8IZF0 1738 aa19.97■□□□□ 0.79
HDLBP-240ENST00000484412 HSPA1LP34931 641 aa19.97■□□□□ 0.79
HDLBP-240ENST00000484412 BRINP3Q76B58 766 aa19.97■□□□□ 0.79
HDLBP-240ENST00000484412 CDC42BPGQ6DT37 1551 aa19.96■□□□□ 0.79
HDLBP-240ENST00000484412 C1orf167Q5SNV9 1468 aa19.96■□□□□ 0.79
HDLBP-240ENST00000484412 TRPM1Q7Z4N2 1603 aa19.95■□□□□ 0.78
HDLBP-240ENST00000484412 CCER1Q8TC90 406 aaPredicted RBP19.94■□□□□ 0.78
HDLBP-240ENST00000484412 SCAF1Q9H7N4 1312 aaKnown RBP19.93■□□□□ 0.78
HDLBP-240ENST00000484412 ROBO1Q9Y6N7 1651 aa19.93■□□□□ 0.78
HDLBP-240ENST00000484412 WASLO00401 505 aaPredicted RBP19.92■□□□□ 0.78
HDLBP-240ENST00000484412 ADGRB2O60241 1585 aa19.91■□□□□ 0.78
HDLBP-240ENST00000484412 ROCK2O75116 1388 aaKnown RBP19.9■□□□□ 0.78
HDLBP-240ENST00000484412 SLC24A1O60721 1099 aa19.89■□□□□ 0.77
HDLBP-240ENST00000484412 AHDC1Q5TGY3 1603 aaPredicted RBP19.89■□□□□ 0.77
HDLBP-240ENST00000484412 ANKARQ7Z5J8 1434 aa19.89■□□□□ 0.77
HDLBP-240ENST00000484412 ARHGEF28Q8N1W1 1705 aaKnown RBP19.89■□□□□ 0.77
HDLBP-240ENST00000484412 ORAI2Q96SN7 254 aa19.89■□□□□ 0.77
HDLBP-240ENST00000484412 RALGAPBQ86X10 1494 aa19.88■□□□□ 0.77
HDLBP-240ENST00000484412 EIF3AQ14152 1382 aaKnown RBP19.88■□□□□ 0.77
HDLBP-240ENST00000484412 SOS2Q07890 1332 aaPredicted RBP19.88■□□□□ 0.77
HDLBP-240ENST00000484412 CENPJQ9HC77 1338 aaPredicted RBP19.88■□□□□ 0.77
HDLBP-240ENST00000484412 LRRC59Q96AG4 307 aaKnown RBP19.87■□□□□ 0.77
HDLBP-240ENST00000484412 FMN2Q9NZ56 1722 aa19.86■□□□□ 0.77
HDLBP-240ENST00000484412 CARD11Q9BXL7 1154 aa19.86■□□□□ 0.77
HDLBP-240ENST00000484412 SBNO2Q9Y2G9 1366 aa19.85■□□□□ 0.77
HDLBP-240ENST00000484412 SAFB2Q14151 953 aaKnown RBP eCLIP19.85■□□□□ 0.77
HDLBP-240ENST00000484412 ESCO1Q5FWF5 840 aa19.85■□□□□ 0.77
HDLBP-240ENST00000484412 PUS7Q96PZ0 661 aaKnown RBP19.85■□□□□ 0.77
HDLBP-240ENST00000484412 MINK1Q8N4C8 1332 aaPredicted RBP19.84■□□□□ 0.77
HDLBP-240ENST00000484412 PHF23Q9BUL5 403 aaPredicted RBP19.83■□□□□ 0.77
HDLBP-240ENST00000484412 CDK19Q9BWU1 502 aa19.83■□□□□ 0.77
HDLBP-240ENST00000484412 NPHP3Q7Z494 1330 aa19.82■□□□□ 0.76
HDLBP-240ENST00000484412 PHF8Q9UPP1 1060 aa19.82■□□□□ 0.76
HDLBP-240ENST00000484412 CCDC61Q9Y6R9 512 aa19.82■□□□□ 0.76
HDLBP-240ENST00000484412 NHSL1Q5SYE7 1610 aa19.82■□□□□ 0.76
HDLBP-240ENST00000484412 JCADQ9P266 1359 aa19.81■□□□□ 0.76
HDLBP-240ENST00000484412 PLEKHG3A1L390 1219 aa19.8■□□□□ 0.76
HDLBP-240ENST00000484412 NUDT16Q96DE0 195 aaKnown RBP19.8■□□□□ 0.76
HDLBP-240ENST00000484412 HIRIP3Q9BW71 556 aaPredicted RBP19.8■□□□□ 0.76
HDLBP-240ENST00000484412 TULP4Q9NRJ4 1543 aa19.8■□□□□ 0.76
HDLBP-240ENST00000484412 COL16A1Q07092 1604 aaPredicted RBP19.8■□□□□ 0.76
HDLBP-240ENST00000484412 PRR36Q9H6K5 1346 aa19.79■□□□□ 0.76
HDLBP-240ENST00000484412 FOXO3O43524 673 aa19.79■□□□□ 0.76
HDLBP-240ENST00000484412 PHLPP1O60346 1717 aa19.79■□□□□ 0.76
HDLBP-240ENST00000484412 SPATA31A6Q5VVP1 1343 aa19.78■□□□□ 0.76
HDLBP-240ENST00000484412 EVC2Q86UK5 1308 aa19.76■□□□□ 0.75
HDLBP-240ENST00000484412 USP32Q8NFA0 1604 aa19.76■□□□□ 0.75
HDLBP-240ENST00000484412 NUTM2FA1L443 756 aa19.76■□□□□ 0.75
HDLBP-240ENST00000484412 PSME1Q06323 249 aa19.76■□□□□ 0.75
HDLBP-240ENST00000484412 KIF1AQ12756 1690 aa19.75■□□□□ 0.75
HDLBP-240ENST00000484412 KRT28Q7Z3Y7 464 aa19.74■□□□□ 0.75
HDLBP-240ENST00000484412 TESK2Q96S53 571 aa19.74■□□□□ 0.75
HDLBP-240ENST00000484412 RGPD8O14715 1765 aaPredicted RBP19.74■□□□□ 0.75
HDLBP-240ENST00000484412 SBNO1A3KN83 1393 aa19.73■□□□□ 0.75
HDLBP-240ENST00000484412 DDX17Q92841 729 aaKnown RBP19.73■□□□□ 0.75
HDLBP-240ENST00000484412 ATP7BP35670 1465 aa19.73■□□□□ 0.75
HDLBP-240ENST00000484412 PXDNQ92626 1479 aa19.73■□□□□ 0.75
HDLBP-240ENST00000484412 POLR3AO14802 1390 aaPredicted RBP19.72■□□□□ 0.75
HDLBP-240ENST00000484412 BRD4O60885 1362 aaPredicted RBP19.72■□□□□ 0.75
HDLBP-240ENST00000484412 ST20-MTHFSA0A0A6YYL1 179 aa19.72■□□□□ 0.75
HDLBP-240ENST00000484412 SPATA31A3Q5VYP0 1347 aa19.72■□□□□ 0.75
HDLBP-240ENST00000484412 ZNF692Q9BU19 519 aaPredicted RBP19.7■□□□□ 0.74
HDLBP-240ENST00000484412 SHPRHQ149N8 1683 aa19.7■□□□□ 0.74
HDLBP-240ENST00000484412 QRICH2Q9H0J4 1663 aa19.7■□□□□ 0.74
HDLBP-240ENST00000484412 SRPK2P78362 688 aaKnown RBP19.69■□□□□ 0.74
HDLBP-240ENST00000484412 PMFBP1Q8TBY8 1022 aa19.69■□□□□ 0.74
HDLBP-240ENST00000484412 CABP2Q9NPB3 220 aa19.69■□□□□ 0.74
HDLBP-240ENST00000484412 PNPLA6Q8IY17 1366 aa19.69■□□□□ 0.74
HDLBP-240ENST00000484412 ATAD2Q6PL18 1390 aa19.67■□□□□ 0.74
HDLBP-240ENST00000484412 ITSN1Q15811 1721 aa19.66■□□□□ 0.74
HDLBP-240ENST00000484412 NGDNQ8NEJ9 315 aaKnown RBP19.66■□□□□ 0.74
HDLBP-240ENST00000484412 ACEP12821 1306 aa19.66■□□□□ 0.74
HDLBP-240ENST00000484412 CABP1Q9NZU7 370 aa19.65■□□□□ 0.74
HDLBP-240ENST00000484412 USP47Q96K76 1375 aa19.65■□□□□ 0.74
HDLBP-240ENST00000484412 TOPAZ1Q8N9V7 1692 aa19.64■□□□□ 0.73
HDLBP-240ENST00000484412 COL22A1Q8NFW1 1626 aaPredicted RBP19.63■□□□□ 0.73
HDLBP-240ENST00000484412 PPIP5K1Q6PFW1 1433 aa19.62■□□□□ 0.73
HDLBP-240ENST00000484412 ARHGEF10O15013 1369 aa19.62■□□□□ 0.73
HDLBP-240ENST00000484412 TMF1P82094 1093 aa19.62■□□□□ 0.73
HDLBP-240ENST00000484412 CDCA8Q53HL2 280 aa19.62■□□□□ 0.73
HDLBP-240ENST00000484412 EIF4G2P78344 907 aaKnown RBP eCLIP19.61■□□□□ 0.73
HDLBP-240ENST00000484412 CPSF1Q10570 1443 aaKnown RBP19.6■□□□□ 0.73
HDLBP-240ENST00000484412 TNS3Q68CZ2 1445 aa19.6■□□□□ 0.73
HDLBP-240ENST00000484412 MED1Q15648 1581 aaPredicted RBP19.6■□□□□ 0.73
HDLBP-240ENST00000484412 SSH2Q76I76 1423 aa19.59■□□□□ 0.73
HDLBP-240ENST00000484412 NINLQ9Y2I6 1382 aa19.59■□□□□ 0.73
HDLBP-240ENST00000484412 XPCQ01831 940 aaPredicted RBP19.59■□□□□ 0.73
HDLBP-240ENST00000484412 TRPM3Q9HCF6 1732 aaPredicted RBP19.58■□□□□ 0.72
HDLBP-240ENST00000484412 RGS17Q9UGC6 210 aaPredicted RBP19.57■□□□□ 0.72
HDLBP-240ENST00000484412 FNBP4Q8N3X1 1017 aaPredicted RBP19.56■□□□□ 0.72
HDLBP-240ENST00000484412 ALS2Q96Q42 1657 aa19.55■□□□□ 0.72
HDLBP-240ENST00000484412 LRP6O75581 1613 aa19.54■□□□□ 0.72
HDLBP-240ENST00000484412 USP6P35125 1406 aa19.54■□□□□ 0.72
HDLBP-240ENST00000484412 SLC12A5Q9H2X9 1139 aa19.54■□□□□ 0.72
HDLBP-240ENST00000484412 DISP3Q9P2K9 1392 aa19.54■□□□□ 0.72
HDLBP-240ENST00000484412 TTC21AQ8NDW8 1320 aa19.52■□□□□ 0.72
HDLBP-240ENST00000484412 ZNF772Q68DY9 489 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms