RNA–Protein interactions for RNA: ENST00000484372.1

SNRNP200-206, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-206ENST00000484372 WAPLQ7Z5K2 1190 aa17.54■□□□□ 0.4
SNRNP200-206ENST00000484372 IFT172Q9UG01 1749 aa17.53■□□□□ 0.4
SNRNP200-206ENST00000484372 HRCP23327 699 aa17.53■□□□□ 0.4
SNRNP200-206ENST00000484372 C14orf93Q9H972 538 aaKnown RBP17.53■□□□□ 0.4
SNRNP200-206ENST00000484372 DHX57Q6P158 1386 aaKnown RBP17.53■□□□□ 0.4
SNRNP200-206ENST00000484372 PNPLA6Q8IY17 1366 aa17.53■□□□□ 0.4
SNRNP200-206ENST00000484372 SOS2Q07890 1332 aaPredicted RBP17.52■□□□□ 0.4
SNRNP200-206ENST00000484372 NPHP3Q7Z494 1330 aa17.52■□□□□ 0.4
SNRNP200-206ENST00000484372 SIRT1Q96EB6 747 aa17.52■□□□□ 0.4
SNRNP200-206ENST00000484372 YTHDC2Q9H6S0 1430 aaKnown RBP17.52■□□□□ 0.4
SNRNP200-206ENST00000484372 CDC42BPGQ6DT37 1551 aa17.52■□□□□ 0.39
SNRNP200-206ENST00000484372 RXRBP28702 533 aa17.51■□□□□ 0.39
SNRNP200-206ENST00000484372 C8orf37Q96NL8 207 aa17.5■□□□□ 0.39
SNRNP200-206ENST00000484372 MYOM2P54296 1465 aa17.5■□□□□ 0.39
SNRNP200-206ENST00000484372 AFF2P51816 1311 aa17.49■□□□□ 0.39
SNRNP200-206ENST00000484372 CFAP70Q5T0N1 1121 aa17.49■□□□□ 0.39
SNRNP200-206ENST00000484372 STAC3Q96MF2 364 aa17.49■□□□□ 0.39
SNRNP200-206ENST00000484372 NUTM2FA1L443 756 aa17.48■□□□□ 0.39
SNRNP200-206ENST00000484372 NGLY1Q96IV0 654 aa17.48■□□□□ 0.39
SNRNP200-206ENST00000484372 LAMC1P11047 1609 aa17.47■□□□□ 0.39
SNRNP200-206ENST00000484372 KNDC1Q76NI1 1749 aa17.47■□□□□ 0.39
SNRNP200-206ENST00000484372 ADAMTS2O95450 1211 aa17.47■□□□□ 0.39
SNRNP200-206ENST00000484372 NRXN1Q9ULB1 1477 aa17.47■□□□□ 0.39
SNRNP200-206ENST00000484372 PLEKHH1Q9ULM0 1364 aa17.46■□□□□ 0.39
SNRNP200-206ENST00000484372 FOXO3O43524 673 aa17.46■□□□□ 0.39
SNRNP200-206ENST00000484372 POGKQ9P215 609 aa17.46■□□□□ 0.39
SNRNP200-206ENST00000484372 DCAF11Q8TEB1 546 aa17.44■□□□□ 0.38
SNRNP200-206ENST00000484372 PRAM1Q96QH2 718 aa17.44■□□□□ 0.38
SNRNP200-206ENST00000484372 QTRT2Q9H974 415 aaKnown RBP17.44■□□□□ 0.38
SNRNP200-206ENST00000484372 KDM2AQ9Y2K7 1162 aa17.44■□□□□ 0.38
SNRNP200-206ENST00000484372 RBM6P78332 1123 aaKnown RBP17.43■□□□□ 0.38
SNRNP200-206ENST00000484372 SAFB2Q14151 953 aaKnown RBP eCLIP17.42■□□□□ 0.38
SNRNP200-206ENST00000484372 XPCQ01831 940 aaPredicted RBP17.41■□□□□ 0.38
SNRNP200-206ENST00000484372 CDK12Q9NYV4 1490 aaPredicted RBP17.41■□□□□ 0.38
SNRNP200-206ENST00000484372 PSME1Q06323 249 aa17.4■□□□□ 0.38
SNRNP200-206ENST00000484372 USP21Q9UK80 565 aa17.4■□□□□ 0.38
SNRNP200-206ENST00000484372 PXDNQ92626 1479 aa17.39■□□□□ 0.37
SNRNP200-206ENST00000484372 KRT28Q7Z3Y7 464 aa17.39■□□□□ 0.37
SNRNP200-206ENST00000484372 TRPC5Q9UL62 973 aaPredicted RBP17.39■□□□□ 0.37
SNRNP200-206ENST00000484372 PHF8Q9UPP1 1060 aa17.39■□□□□ 0.37
SNRNP200-206ENST00000484372 TRAK1Q9UPV9 953 aa17.39■□□□□ 0.37
SNRNP200-206ENST00000484372 FMN2Q9NZ56 1722 aa17.38■□□□□ 0.37
SNRNP200-206ENST00000484372 DLC1Q96QB1 1528 aa17.38■□□□□ 0.37
SNRNP200-206ENST00000484372 KIF1AQ12756 1690 aa17.38■□□□□ 0.37
SNRNP200-206ENST00000484372 COL22A1Q8NFW1 1626 aaPredicted RBP17.37■□□□□ 0.37
SNRNP200-206ENST00000484372 FNBP4Q8N3X1 1017 aaPredicted RBP17.37■□□□□ 0.37
SNRNP200-206ENST00000484372 HAP1P54257 671 aaPredicted RBP17.36■□□□□ 0.37
SNRNP200-206ENST00000484372 SPATA31A3Q5VYP0 1347 aa17.36■□□□□ 0.37
SNRNP200-206ENST00000484372 EIF3AQ14152 1382 aaKnown RBP17.36■□□□□ 0.37
SNRNP200-206ENST00000484372 UPF1Q92900 1129 aaKnown RBP eCLIP17.35■□□□□ 0.37
SNRNP200-206ENST00000484372 ANKARQ7Z5J8 1434 aa17.34■□□□□ 0.37
SNRNP200-206ENST00000484372 ADGRB1O14514 1584 aa17.33■□□□□ 0.37
SNRNP200-206ENST00000484372 MINK1Q8N4C8 1332 aaPredicted RBP17.32■□□□□ 0.36
SNRNP200-206ENST00000484372 LMOD2Q6P5Q4 547 aa17.32■□□□□ 0.36
SNRNP200-206ENST00000484372 HIRIP3Q9BW71 556 aaPredicted RBP17.32■□□□□ 0.36
SNRNP200-206ENST00000484372 RGS12O14924 1447 aa17.3■□□□□ 0.36
SNRNP200-206ENST00000484372 TNS3Q68CZ2 1445 aa17.3■□□□□ 0.36
SNRNP200-206ENST00000484372 SBNO1A3KN83 1393 aa17.3■□□□□ 0.36
SNRNP200-206ENST00000484372 WASLO00401 505 aaPredicted RBP17.3■□□□□ 0.36
SNRNP200-206ENST00000484372 PMFBP1Q8TBY8 1022 aa17.3■□□□□ 0.36
SNRNP200-206ENST00000484372 ARHGEF10O15013 1369 aa17.29■□□□□ 0.36
SNRNP200-206ENST00000484372 GPRASP1Q5JY77 1395 aa17.29■□□□□ 0.36
SNRNP200-206ENST00000484372 ADGRB2O60241 1585 aa17.29■□□□□ 0.36
SNRNP200-206ENST00000484372 ATRNO75882 1429 aa17.28■□□□□ 0.36
SNRNP200-206ENST00000484372 RGPD8O14715 1765 aaPredicted RBP17.28■□□□□ 0.36
SNRNP200-206ENST00000484372 UNC5CLQ8IV45 518 aa17.27■□□□□ 0.36
SNRNP200-206ENST00000484372 NGDNQ8NEJ9 315 aaKnown RBP17.27■□□□□ 0.36
SNRNP200-206ENST00000484372 PLEKHG5O94827 1062 aa17.26■□□□□ 0.35
SNRNP200-206ENST00000484372 GJD4Q96KN9 370 aaPredicted RBP17.26■□□□□ 0.35
SNRNP200-206ENST00000484372 ATAD2Q6PL18 1390 aa17.26■□□□□ 0.35
SNRNP200-206ENST00000484372 BCL9LQ86UU0 1499 aa17.25■□□□□ 0.35
SNRNP200-206ENST00000484372 MARF1Q9Y4F3 1742 aaKnown RBP17.25■□□□□ 0.35
SNRNP200-206ENST00000484372 TULP4Q9NRJ4 1543 aa17.25■□□□□ 0.35
SNRNP200-206ENST00000484372 CABLES1Q8TDN4 633 aa17.24■□□□□ 0.35
SNRNP200-206ENST00000484372 PRR36Q9H6K5 1346 aa17.22■□□□□ 0.35
SNRNP200-206ENST00000484372 SLIT2O94813 1529 aa17.21■□□□□ 0.35
SNRNP200-206ENST00000484372 USP32Q8NFA0 1604 aa17.21■□□□□ 0.35
SNRNP200-206ENST00000484372 PAK3O75914 559 aaPredicted RBP17.21■□□□□ 0.35
SNRNP200-206ENST00000484372 NUDT16Q96DE0 195 aaKnown RBP17.21■□□□□ 0.35
SNRNP200-206ENST00000484372 CDK19Q9BWU1 502 aa17.2■□□□□ 0.34
SNRNP200-206ENST00000484372 CCDC9Q9Y3X0 531 aaKnown RBP17.2■□□□□ 0.34
SNRNP200-206ENST00000484372 KIAA1210Q9ULL0 1709 aa17.2■□□□□ 0.34
SNRNP200-206ENST00000484372 ARHGEF28Q8N1W1 1705 aaKnown RBP17.19■□□□□ 0.34
SNRNP200-206ENST00000484372 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.18■□□□□ 0.34
SNRNP200-206ENST00000484372 VPS72Q15906 364 aa17.18■□□□□ 0.34
SNRNP200-206ENST00000484372 CCDC61Q9Y6R9 512 aa17.18■□□□□ 0.34
SNRNP200-206ENST00000484372 NBPF1Q3BBV0 1214 aa17.17■□□□□ 0.34
SNRNP200-206ENST00000484372 CCDC125Q86Z20 511 aa17.17■□□□□ 0.34
SNRNP200-206ENST00000484372 FAM83GA6ND36 823 aa17.16■□□□□ 0.34
SNRNP200-206ENST00000484372 RALGAPBQ86X10 1494 aa17.16■□□□□ 0.34
SNRNP200-206ENST00000484372 CENPJQ9HC77 1338 aaPredicted RBP17.16■□□□□ 0.34
SNRNP200-206ENST00000484372 ITSN1Q15811 1721 aa17.16■□□□□ 0.34
SNRNP200-206ENST00000484372 SRPK2P78362 688 aaKnown RBP17.15■□□□□ 0.34
SNRNP200-206ENST00000484372 L3MBTL2Q969R5 705 aa17.15■□□□□ 0.34
SNRNP200-206ENST00000484372 ATP7BP35670 1465 aa17.15■□□□□ 0.34
SNRNP200-206ENST00000484372 NEUROD1Q13562 356 aa17.14■□□□□ 0.33
SNRNP200-206ENST00000484372 TRPM3Q9HCF6 1732 aaPredicted RBP17.13■□□□□ 0.33
SNRNP200-206ENST00000484372 NWD2Q9ULI1 1742 aa17.13■□□□□ 0.33
SNRNP200-206ENST00000484372 BTG4Q9NY30 223 aa17.13■□□□□ 0.33
SNRNP200-206ENST00000484372 A0A0G2JS52 829 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms