RNA–Protein interactions for RNA: ENST00000484268.1

ABCA13-206, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 3,340 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-206ENST00000484268 GTPBP4Q9BZE4 634 aaKnown RBP8.78□□□□□ -1
ABCA13-206ENST00000484268 FAM177BA6PVY3 158 aa8.77□□□□□ -1
ABCA13-206ENST00000484268 RAB3GAP1Q15042 981 aa8.77□□□□□ -1
ABCA13-206ENST00000484268 KNSTRNQ9Y448 316 aa8.77□□□□□ -1
ABCA13-206ENST00000484268 KIF20AO95235 890 aa8.77□□□□□ -1.01
ABCA13-206ENST00000484268 HSP90AB1P08238 724 aaKnown RBP8.77□□□□□ -1.01
ABCA13-206ENST00000484268 SASS6Q6UVJ0 657 aa8.77□□□□□ -1.01
ABCA13-206ENST00000484268 SMC5Q8IY18 1101 aa8.77□□□□□ -1.01
ABCA13-206ENST00000484268 TESK2Q96S53 571 aa8.77□□□□□ -1.01
ABCA13-206ENST00000484268 CFDP1Q9UEE9 299 aaPredicted RBP8.77□□□□□ -1.01
ABCA13-206ENST00000484268 CD2BP2O95400 341 aaKnown RBP8.77□□□□□ -1.01
ABCA13-206ENST00000484268 SSFA2P28290 1259 aa8.77□□□□□ -1.01
ABCA13-206ENST00000484268 RBM42Q9BTD8 480 aaKnown RBP8.76□□□□□ -1.01
ABCA13-206ENST00000484268 ANKRD30AQ9BXX3 1397 aa8.76□□□□□ -1.01
ABCA13-206ENST00000484268 TARBP1Q13395 1621 aaKnown RBP8.76□□□□□ -1.01
ABCA13-206ENST00000484268 SNX21Q969T3 373 aa8.75□□□□□ -1.01
ABCA13-206ENST00000484268 PDLIM2Q96JY6 352 aa8.75□□□□□ -1.01
ABCA13-206ENST00000484268 COL17A1Q9UMD9 1497 aaPredicted RBP8.75□□□□□ -1.01
ABCA13-206ENST00000484268 IGSF3O75054 1194 aa8.75□□□□□ -1.01
ABCA13-206ENST00000484268 MCM5P33992 734 aa8.75□□□□□ -1.01
ABCA13-206ENST00000484268 CHAMP1Q96JM3 812 aa8.75□□□□□ -1.01
ABCA13-206ENST00000484268 ZKSCAN5Q9Y2L8 839 aa8.75□□□□□ -1.01
ABCA13-206ENST00000484268 DDX49Q9Y6V7 483 aaKnown RBP8.75□□□□□ -1.01
ABCA13-206ENST00000484268 E9PSI1 815 aa8.75□□□□□ -1.01
ABCA13-206ENST00000484268 LETM1O95202 739 aaPredicted RBP8.75□□□□□ -1.01
ABCA13-206ENST00000484268 TOPBP1Q92547 1522 aa8.75□□□□□ -1.01
ABCA13-206ENST00000484268 POLA1P09884 1462 aaPredicted RBP8.74□□□□□ -1.01
ABCA13-206ENST00000484268 ABCA10Q8WWZ4 1543 aa8.74□□□□□ -1.01
ABCA13-206ENST00000484268 KLHL40Q2TBA0 621 aa8.74□□□□□ -1.01
ABCA13-206ENST00000484268 IPO4Q8TEX9 1081 aaKnown RBP8.74□□□□□ -1.01
ABCA13-206ENST00000484268 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.74□□□□□ -1.01
ABCA13-206ENST00000484268 TMEM51Q9NW97 253 aa8.74□□□□□ -1.01
ABCA13-206ENST00000484268 ZNF445P59923 1031 aa8.74□□□□□ -1.01
ABCA13-206ENST00000484268 TMF1P82094 1093 aa8.74□□□□□ -1.01
ABCA13-206ENST00000484268 CBX1P83916 185 aa8.74□□□□□ -1.01
ABCA13-206ENST00000484268 TAF7LQ5H9L4 462 aa8.74□□□□□ -1.01
ABCA13-206ENST00000484268 CAVIN1Q6NZI2 390 aaKnown RBP8.74□□□□□ -1.01
ABCA13-206ENST00000484268 AK9Q5TCS8 1911 aa8.73□□□□□ -1.01
ABCA13-206ENST00000484268 CHMP4BQ9H444 224 aaKnown RBP8.73□□□□□ -1.01
ABCA13-206ENST00000484268 RBM27Q9P2N5 1060 aaKnown RBP8.73□□□□□ -1.01
ABCA13-206ENST00000484268 RBSNQ9H1K0 784 aa8.72□□□□□ -1.01
ABCA13-206ENST00000484268 RWDD1Q9H446 243 aaPredicted RBP8.72□□□□□ -1.01
ABCA13-206ENST00000484268 RNF216Q9NWF9 866 aaPredicted RBP8.72□□□□□ -1.01
ABCA13-206ENST00000484268 CLEC17AQ6ZS10 378 aa8.72□□□□□ -1.01
ABCA13-206ENST00000484268 PAXIP1Q6ZW49 1069 aaPredicted RBP8.72□□□□□ -1.01
ABCA13-206ENST00000484268 ERBINQ96RT1 1412 aa8.72□□□□□ -1.01
ABCA13-206ENST00000484268 ANKRD50Q9ULJ7 1429 aa8.72□□□□□ -1.01
ABCA13-206ENST00000484268 GOLGA6L22H0YM25 854 aa8.72□□□□□ -1.01
ABCA13-206ENST00000484268 RBM25P49756 843 aaKnown RBP8.72□□□□□ -1.01
ABCA13-206ENST00000484268 RARSP54136 660 aaKnown RBP8.72□□□□□ -1.01
ABCA13-206ENST00000484268 SAMD1Q6SPF0 538 aaPredicted RBP8.72□□□□□ -1.01
ABCA13-206ENST00000484268 MAGI2Q86UL8 1455 aa8.71□□□□□ -1.01
ABCA13-206ENST00000484268 FOXD4L5Q5VV16 416 aaPredicted RBP8.71□□□□□ -1.01
ABCA13-206ENST00000484268 MCTP1Q6DN14 999 aa8.71□□□□□ -1.01
ABCA13-206ENST00000484268 RNF214Q8ND24 703 aa8.71□□□□□ -1.01
ABCA13-206ENST00000484268 MYRIPQ8NFW9 859 aa8.71□□□□□ -1.01
ABCA13-206ENST00000484268 FOXD4L4Q8WXT5 416 aaPredicted RBP8.71□□□□□ -1.01
ABCA13-206ENST00000484268 ARHGAP31Q2M1Z3 1444 aa8.71□□□□□ -1.01
ABCA13-206ENST00000484268 PLXNC1O60486 1568 aa8.71□□□□□ -1.02
ABCA13-206ENST00000484268 CEP170Q5SW79 1584 aa8.71□□□□□ -1.02
ABCA13-206ENST00000484268 WWC1Q8IX03 1113 aa8.71□□□□□ -1.02
ABCA13-206ENST00000484268 GAS2L2Q8NHY3 880 aa8.71□□□□□ -1.02
ABCA13-206ENST00000484268 VGLL3A8MV65 326 aa8.7□□□□□ -1.02
ABCA13-206ENST00000484268 IFT140Q96RY7 1462 aa8.7□□□□□ -1.02
ABCA13-206ENST00000484268 ABCC2Q92887 1545 aa8.7□□□□□ -1.02
ABCA13-206ENST00000484268 ZNF710Q8N1W2 664 aa8.7□□□□□ -1.02
ABCA13-206ENST00000484268 LNPKQ9C0E8 428 aa8.7□□□□□ -1.02
ABCA13-206ENST00000484268 CCDC39Q9UFE4 941 aa8.7□□□□□ -1.02
ABCA13-206ENST00000484268 TRPM1Q7Z4N2 1603 aa8.7□□□□□ -1.02
ABCA13-206ENST00000484268 PRIM1P49642 420 aaKnown RBP8.7□□□□□ -1.02
ABCA13-206ENST00000484268 PKP1Q13835 747 aa8.7□□□□□ -1.02
ABCA13-206ENST00000484268 TAF3Q5VWG9 929 aa8.7□□□□□ -1.02
ABCA13-206ENST00000484268 PRAG1Q86YV5 1406 aa8.69□□□□□ -1.02
ABCA13-206ENST00000484268 PRG4Q92954 1404 aaPredicted RBP8.69□□□□□ -1.02
ABCA13-206ENST00000484268 GPRASP1Q5JY77 1395 aa8.69□□□□□ -1.02
ABCA13-206ENST00000484268 SPDYE4A6NLX3 237 aa8.69□□□□□ -1.02
ABCA13-206ENST00000484268 DNTTIP2Q5QJE6 756 aaKnown RBP8.69□□□□□ -1.02
ABCA13-206ENST00000484268 C17orf53Q8N3J3 647 aaPredicted RBP8.69□□□□□ -1.02
ABCA13-206ENST00000484268 BAG4O95429 457 aaKnown RBP8.69□□□□□ -1.02
ABCA13-206ENST00000484268 ZSCAN23Q3MJ62 389 aa8.69□□□□□ -1.02
ABCA13-206ENST00000484268 ATP2B3Q16720 1220 aa8.69□□□□□ -1.02
ABCA13-206ENST00000484268 FTSJ3Q8IY81 847 aaKnown RBP8.69□□□□□ -1.02
ABCA13-206ENST00000484268 NGEFQ8N5V2 710 aa8.69□□□□□ -1.02
ABCA13-206ENST00000484268 ZNF830Q96NB3 372 aaPredicted RBP8.69□□□□□ -1.02
ABCA13-206ENST00000484268 PIK3C2GO75747 1445 aa8.68□□□□□ -1.02
ABCA13-206ENST00000484268 FAM135AQ9P2D6 1515 aa8.68□□□□□ -1.02
ABCA13-206ENST00000484268 SLC4A2P04920 1241 aa8.68□□□□□ -1.02
ABCA13-206ENST00000484268 ADGRL2O95490 1459 aa8.68□□□□□ -1.02
ABCA13-206ENST00000484268 ADGBQ8N7X0 1667 aa8.68□□□□□ -1.02
ABCA13-206ENST00000484268 KDM5DQ9BY66 1539 aa8.68□□□□□ -1.02
ABCA13-206ENST00000484268 GTF2F1P35269 517 aaKnown RBP eCLIP8.68□□□□□ -1.02
ABCA13-206ENST00000484268 ITPRIPQ8IWB1 547 aa8.67□□□□□ -1.02
ABCA13-206ENST00000484268 PRIMPOLQ96LW4 560 aa8.67□□□□□ -1.02
ABCA13-206ENST00000484268 HNRNPMP52272 730 aaKnown RBP eCLIP8.67□□□□□ -1.02
ABCA13-206ENST00000484268 TSR2Q969E8 191 aaKnown RBP8.67□□□□□ -1.02
ABCA13-206ENST00000484268 KIF2CQ99661 725 aa8.67□□□□□ -1.02
ABCA13-206ENST00000484268 PRDM15P57071 1507 aaPredicted RBP8.67□□□□□ -1.02
ABCA13-206ENST00000484268 K7ELQ4 463 aaPredicted RBP8.66□□□□□ -1.02
ABCA13-206ENST00000484268 PRPF40AO75400 957 aaKnown RBP8.66□□□□□ -1.02
ABCA13-206ENST00000484268 PTMAP06454 111 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms