RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 PNPLA6Q8IY17 1366 aa28.31■■■□□ 2.12
NDUFA3-213ENST00000484103 ACIN1Q9UKV3 1341 aaKnown RBP28.3■■■□□ 2.12
NDUFA3-213ENST00000484103 C8orf37Q96NL8 207 aa28.3■■■□□ 2.12
NDUFA3-213ENST00000484103 CFAP70Q5T0N1 1121 aa28.29■■■□□ 2.12
NDUFA3-213ENST00000484103 XPCQ01831 940 aaPredicted RBP28.28■■■□□ 2.12
NDUFA3-213ENST00000484103 ZNF772Q68DY9 489 aaPredicted RBP28.28■■■□□ 2.12
NDUFA3-213ENST00000484103 CDC42BPGQ6DT37 1551 aa28.28■■■□□ 2.12
NDUFA3-213ENST00000484103 YTHDC2Q9H6S0 1430 aaKnown RBP28.27■■■□□ 2.12
NDUFA3-213ENST00000484103 ADAMTS2O95450 1211 aa28.27■■■□□ 2.12
NDUFA3-213ENST00000484103 AFF2P51816 1311 aa28.26■■■□□ 2.11
NDUFA3-213ENST00000484103 SAFB2Q14151 953 aaKnown RBP eCLIP28.26■■■□□ 2.11
NDUFA3-213ENST00000484103 KDM2AQ9Y2K7 1162 aa28.25■■■□□ 2.11
NDUFA3-213ENST00000484103 TECPR2O15040 1411 aa28.25■■■□□ 2.11
NDUFA3-213ENST00000484103 KNDC1Q76NI1 1749 aa28.24■■■□□ 2.11
NDUFA3-213ENST00000484103 ABCC11Q96J66 1382 aa28.24■■■□□ 2.11
NDUFA3-213ENST00000484103 MYOM2P54296 1465 aa28.22■■■□□ 2.11
NDUFA3-213ENST00000484103 C14orf93Q9H972 538 aaKnown RBP28.22■■■□□ 2.11
NDUFA3-213ENST00000484103 SOS2Q07890 1332 aaPredicted RBP28.21■■■□□ 2.11
NDUFA3-213ENST00000484103 FOXO3O43524 673 aa28.21■■■□□ 2.11
NDUFA3-213ENST00000484103 LAMC1P11047 1609 aa28.19■■■□□ 2.1
NDUFA3-213ENST00000484103 DHX57Q6P158 1386 aaKnown RBP28.19■■■□□ 2.1
NDUFA3-213ENST00000484103 NRXN1Q9ULB1 1477 aa28.19■■■□□ 2.1
NDUFA3-213ENST00000484103 RXRBP28702 533 aa28.18■■■□□ 2.1
NDUFA3-213ENST00000484103 NPHP3Q7Z494 1330 aa28.18■■■□□ 2.1
NDUFA3-213ENST00000484103 DCAF11Q8TEB1 546 aa28.17■■■□□ 2.1
NDUFA3-213ENST00000484103 NGLY1Q96IV0 654 aa28.17■■■□□ 2.1
NDUFA3-213ENST00000484103 PRAM1Q96QH2 718 aa28.17■■■□□ 2.1
NDUFA3-213ENST00000484103 FMN2Q9NZ56 1722 aa28.15■■■□□ 2.1
NDUFA3-213ENST00000484103 PLEKHG5O94827 1062 aa28.14■■■□□ 2.1
NDUFA3-213ENST00000484103 POGKQ9P215 609 aa28.14■■■□□ 2.1
NDUFA3-213ENST00000484103 TRAK1Q9UPV9 953 aa28.13■■■□□ 2.09
NDUFA3-213ENST00000484103 PXDNQ92626 1479 aa28.13■■■□□ 2.09
NDUFA3-213ENST00000484103 QTRT2Q9H974 415 aaKnown RBP28.11■■■□□ 2.09
NDUFA3-213ENST00000484103 HIRIP3Q9BW71 556 aaPredicted RBP28.09■■■□□ 2.09
NDUFA3-213ENST00000484103 RGPD8O14715 1765 aaPredicted RBP28.07■■■□□ 2.08
NDUFA3-213ENST00000484103 COL22A1Q8NFW1 1626 aaPredicted RBP28.05■■■□□ 2.08
NDUFA3-213ENST00000484103 SIRT1Q96EB6 747 aa28.05■■■□□ 2.08
NDUFA3-213ENST00000484103 USP21Q9UK80 565 aa28.05■■■□□ 2.08
NDUFA3-213ENST00000484103 ADGRB1O14514 1584 aa28.04■■■□□ 2.08
NDUFA3-213ENST00000484103 MINK1Q8N4C8 1332 aaPredicted RBP28.04■■■□□ 2.08
NDUFA3-213ENST00000484103 HRCP23327 699 aa28.04■■■□□ 2.08
NDUFA3-213ENST00000484103 KIF1AQ12756 1690 aa28.03■■■□□ 2.08
NDUFA3-213ENST00000484103 KRT28Q7Z3Y7 464 aa28.03■■■□□ 2.08
NDUFA3-213ENST00000484103 PHF8Q9UPP1 1060 aa28.03■■■□□ 2.08
NDUFA3-213ENST00000484103 PMFBP1Q8TBY8 1022 aa28.02■■■□□ 2.08
NDUFA3-213ENST00000484103 RGS12O14924 1447 aa28.01■■■□□ 2.08
NDUFA3-213ENST00000484103 RBM6P78332 1123 aaKnown RBP28.01■■■□□ 2.07
NDUFA3-213ENST00000484103 LMOD2Q6P5Q4 547 aa28.01■■■□□ 2.07
NDUFA3-213ENST00000484103 DLC1Q96QB1 1528 aa28.01■■■□□ 2.07
NDUFA3-213ENST00000484103 UPF1Q92900 1129 aaKnown RBP eCLIP27.98■■■□□ 2.07
NDUFA3-213ENST00000484103 SPATA31A3Q5VYP0 1347 aa27.97■■■□□ 2.07
NDUFA3-213ENST00000484103 HAP1P54257 671 aaPredicted RBP27.97■■■□□ 2.07
NDUFA3-213ENST00000484103 PSME1Q06323 249 aa27.96■■■□□ 2.07
NDUFA3-213ENST00000484103 CDK12Q9NYV4 1490 aaPredicted RBP27.95■■■□□ 2.07
NDUFA3-213ENST00000484103 CABLES1Q8TDN4 633 aa27.95■■■□□ 2.06
NDUFA3-213ENST00000484103 TRPC5Q9UL62 973 aaPredicted RBP27.95■■■□□ 2.06
NDUFA3-213ENST00000484103 USP32Q8NFA0 1604 aa27.95■■■□□ 2.06
NDUFA3-213ENST00000484103 FNBP4Q8N3X1 1017 aaPredicted RBP27.93■■■□□ 2.06
NDUFA3-213ENST00000484103 MARF1Q9Y4F3 1742 aaKnown RBP27.92■■■□□ 2.06
NDUFA3-213ENST00000484103 TNS3Q68CZ2 1445 aa27.92■■■□□ 2.06
NDUFA3-213ENST00000484103 ADGRB2O60241 1585 aa27.91■■■□□ 2.06
NDUFA3-213ENST00000484103 PRR36Q9H6K5 1346 aa27.89■■■□□ 2.05
NDUFA3-213ENST00000484103 ATRNO75882 1429 aa27.88■■■□□ 2.05
NDUFA3-213ENST00000484103 ANKARQ7Z5J8 1434 aa27.88■■■□□ 2.05
NDUFA3-213ENST00000484103 ARHGEF28Q8N1W1 1705 aaKnown RBP27.88■■■□□ 2.05
NDUFA3-213ENST00000484103 WASLO00401 505 aaPredicted RBP27.87■■■□□ 2.05
NDUFA3-213ENST00000484103 BCL9LQ86UU0 1499 aa27.87■■■□□ 2.05
NDUFA3-213ENST00000484103 STAC3Q96MF2 364 aa27.86■■■□□ 2.05
NDUFA3-213ENST00000484103 TULP4Q9NRJ4 1543 aa27.85■■■□□ 2.05
NDUFA3-213ENST00000484103 SBNO1A3KN83 1393 aa27.83■■■□□ 2.05
NDUFA3-213ENST00000484103 NBPF1Q3BBV0 1214 aa27.82■■■□□ 2.04
NDUFA3-213ENST00000484103 NGDNQ8NEJ9 315 aaKnown RBP27.82■■■□□ 2.04
NDUFA3-213ENST00000484103 EIF3AQ14152 1382 aaKnown RBP27.82■■■□□ 2.04
NDUFA3-213ENST00000484103 PAK3O75914 559 aaPredicted RBP27.81■■■□□ 2.04
NDUFA3-213ENST00000484103 GPRASP1Q5JY77 1395 aa27.81■■■□□ 2.04
NDUFA3-213ENST00000484103 ARHGEF10O15013 1369 aa27.8■■■□□ 2.04
NDUFA3-213ENST00000484103 UNC5CLQ8IV45 518 aa27.79■■■□□ 2.04
NDUFA3-213ENST00000484103 GJD4Q96KN9 370 aaPredicted RBP27.79■■■□□ 2.04
NDUFA3-213ENST00000484103 ABCA3Q99758 1704 aa27.78■■■□□ 2.04
NDUFA3-213ENST00000484103 NEUROD1Q13562 356 aa27.78■■■□□ 2.04
NDUFA3-213ENST00000484103 SIN3AQ96ST3 1273 aa27.78■■■□□ 2.04
NDUFA3-213ENST00000484103 CCDC9Q9Y3X0 531 aaKnown RBP27.78■■■□□ 2.04
NDUFA3-213ENST00000484103 SLIT2O94813 1529 aa27.77■■■□□ 2.04
NDUFA3-213ENST00000484103 TRPM3Q9HCF6 1732 aaPredicted RBP27.76■■■□□ 2.03
NDUFA3-213ENST00000484103 NUDT16Q96DE0 195 aaKnown RBP27.76■■■□□ 2.03
NDUFA3-213ENST00000484103 CDK19Q9BWU1 502 aa27.76■■■□□ 2.03
NDUFA3-213ENST00000484103 ATAD2Q6PL18 1390 aa27.75■■■□□ 2.03
NDUFA3-213ENST00000484103 RALGAPBQ86X10 1494 aa27.75■■■□□ 2.03
NDUFA3-213ENST00000484103 PLCH1Q4KWH8 1693 aa27.75■■■□□ 2.03
NDUFA3-213ENST00000484103 ATP7BP35670 1465 aa27.74■■■□□ 2.03
NDUFA3-213ENST00000484103 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.73■■■□□ 2.03
NDUFA3-213ENST00000484103 KIAA1210Q9ULL0 1709 aa27.73■■■□□ 2.03
NDUFA3-213ENST00000484103 L3MBTL2Q969R5 705 aa27.72■■■□□ 2.03
NDUFA3-213ENST00000484103 GLI3P10071 1580 aa27.72■■■□□ 2.03
NDUFA3-213ENST00000484103 FAM83GA6ND36 823 aa27.71■■■□□ 2.03
NDUFA3-213ENST00000484103 ITSN1Q15811 1721 aa27.71■■■□□ 2.03
NDUFA3-213ENST00000484103 NUTM2GQ5VZR2 741 aa27.7■■■□□ 2.02
NDUFA3-213ENST00000484103 ALS2Q96Q42 1657 aa27.7■■■□□ 2.02
NDUFA3-213ENST00000484103 A0A0G2JS52 829 aa27.68■■■□□ 2.02
NDUFA3-213ENST00000484103 MYT1Q01538 1121 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms